BGIOSGA004346

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Revision as of 11:05, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA004346| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA004346, complete gene.| tag = P0480C0...")
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Gene Name

BGIOSGA004346

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA004346, complete gene.

LocusTag

P0480C01.33

Ensembl Transcript ID

BGIOSGA004346-TA

Ensembl Protein ID

BGIOSGA004346-PA

Length

5380

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:33215430..33220809

Sequence Coding Region

33215430..33215820,33215919..33216126,33216268..33216439,33218383..33218448,33218574..33218687
,33218797..33218913,33219014..33219140,33219234..33219520,33219618..33219808
,33219898..33219980,33220092..33220168,33220642..33220809

Genome Context

<gbrowseImage1> name=IndicaChromosome01:33215430..33220809 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:33215430..33220809 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGACGGAGGCAGGCGACGTCGACGGCCGCAACCACCGGCCCGGCCGCGGGTCGTCCGCGTCGTCGCGCCACCTGCACGGCGTGGGAGGCGCCTCGGCGGCGGAGGTGAACCTGTCCGGGCGCCGCCCGTTCGCGGAGAAGCTGTGGTCGGACCTCGCGGAGACGTTCTTCCCCGACGACCCGTTCCGCGGGTTCGGCGCGCTGCCCCCGGCCAGGCGCGCGTGGTGCGCGGTCAAGTACTTCGTCCCGGCGCTGGACTGGGTCCCGCGCTACGGCCTCGACAAGTTCAAGTTCGACCTCCTCGCCGGCATCACCATCGCCAGCCTCGCCATCCCGCAGGGCATCAGCTACGCCCGCCTCGCCAACCTCCCTCCAATCATCGGCCTCTATTCGAGCTTCGTGCCGCCGTTGATGTACGCGGTGTTCGGGAGCTCCAACAACCTGGCGGTGGGGACGGTGGCGGCGGCGTCGCTGCTGCTGGCGTCCATCATCGAGACGGAGGTGGCGGCGGACGAGAACCCGCAGCTGTACCTGCAGCTCTTCTACACCGCCGCCTTCTTCACCGGCCTCTTCCAGACCGCGCTAGGCGTCTTTAGGTTAGGGCTAATAGTGGATTTCCTCTCGCGGTCGACGATCACCGGGTTCATGGGCGGCACGGCGATGATCATCATACTGCAGCAGTTCAAGGGCCTCCTGGGGATGAAGCACTTCACCACCAAGACAGACATCATCTCCGTCCTGCACTCCACCTACCATTACCGGCACGAGTGGAAATGGCAGAGTGCAGTTCTCGGCATATGCTTCCTCTTGTTCTTGCTGTCGAGTAAGCACCTGAGAAAGAAACTGCCAAAGTTGTTCTGGGTGTCGGCCATTGCGCCATTCATGGTTGTCGTCATCGGAGGCATCTTCGCTTTCCTCGTCAAGGGTGACGAGCATGGAATTCCGATAGTCGGTAACCTGAATAAAGGGATCAATCCCCTGTCCATTGCGCAGCTAACGTTCCAGTCCAGGCACATGAAGACGGCAGTGAAAGCTGGTCTCTTGTCTGGGATCCTAGCACTGGCAGAAGGAATAGCCGTCGGCCGAAGCTTGGCGATGGTCAAGAACGAGCAGATCGACGGCAACAAGGAGATGATCGCGTTTGGTATCATGAACATCGCCGGTTCTTTCACCTCCTGCTACCTCACGACAGGGCCGTTCTCAAAGTCGGCGGTGAACTTCCACGCCGGGTGCAAGACGCCGATGTCGAACGTGGTGATGTCGGTGTGCATCATGCTGGTGCTACTGTTCCTGGCACCCCTCTTCAAGTACACCCCGCTGGTGGCGCTCTCCTCCATCATCGTCGTCGCCATGATCGGGCTCGTCAAGGTCAAGGAGTTCTGCCACCTCTACAAGGTCGACAAGTTCGACTTCTGCATCTGCATGGTCGCCTTCCTCGGCGTCGTCTTCTTCACCATGGTCGCAGGCCTCAGCGCATCCGTAGGCTTGTCAGTTGTCAGGGCGTTGCTGTACGTGGCCAGGCCTGCCACCTGCAAGCTCGGGAACATAGCAGGGAGCGAGACCTTCCGCGACGTGAAGCAATACCCCCAAGCGAAGAGCATCCCTGGCATCCTCGTCTTGCAGCTCGGCTCTCCCATCTACTTCGTCAATGCGGGTTACCTGCGAGAAAGGATTTTGAGATGGGTGGAAGATGAGGATAACCTGTGCAAGAGCGTCGGGCACGATTTGCAATACTTGGTTCTTGATCTTGGTGGTGTCACTTCTGTCGACAACTCTGGAGTTGGGATGCTACTAGAAGTACACAAGAGCCTCGAACGAAGAGGGATCACGATAGCTCTGACGAATCCGAGGCTAGAGGTGACAGAGAAGCTGGTGCTGTCTGGATACGTCAGGGACATCTTAGGGGATGAGTGGGTCTTCCTGACGGTCAAGGACGCCATCACGGCGTGTCGATACGCGCTGCAGATATCCAGAAATAAGGGAGAAGACGAAGTATAG</cdnaseq>

Protein Sequence

<aaseq>MGTEAGDVDGRNHRPGRGSSASSRHLHGVGGASAAEVNLSGRRPFAEKLWSDLAETFFPDDPFRGFGALPPARRAWCAVKYFVPALDWVPRYGLDKFKFDLLAGITIASLAIPQGISYARLANLPPIIGLYSSFVPPLMYAVFGSSNNLAVGTVAAASLLLASIIETEVAADENPQLYLQLFYTAAFFTGLFQTALGVFRLGLIVDFLSRSTITGFMGGTAMIIILQQFKGLLGMKHFTTKTDIISVLHSTYHYRHEWKWQSAVLGICFLLFLLSSKHLRKKLPKLFWVSAIAPFMVVVIGGIFAFLVKGDEHGIPIVGNLNKGINPLSIAQLTFQSRHMKTAVKAGLLSGILALAEGIAVGRSLAMVKNEQIDGNKEMIAFGIMNIAGSFTSCYLTTGPFSKSAVNFHAGCKTPMSNVVMSVCIMLVLLFLAPLFKYTPLVALSSIIVVAMIGLVKVKEFCHLYKVDKFDFCICMVAFLGVVFFTMVAGLSASVGLSVVRALLYVARPATCKLGNIAGSETFRDVKQYPQAKSIPGILVLQLGSPIYFVNAGYLRERILRWVEDEDNLCKSVGHDLQYLVLDLGGVTSVDNSGVGMLLEVHKSLERRGITIALTNPRLEVTEKLVLSGYVRDILGDEWVFLTVKDAITACRYALQISRNKGEDEV</aaseq>

Gene Sequence

<dnaseqindica>1..391#490..697#839..1010#2954..3019#3145..3258#3368..3484#3585..3711#3805..4091#4189..4379#4469..4551#4663..4739#5213..5380#ATGGGGACGGAGGCAGGCGACGTCGACGGCCGCAACCACCGGCCCGGCCGCGGGTCGTCCGCGTCGTCGCGCCACCTGCACGGCGTGGGAGGCGCCTCGGCGGCGGAGGTGAACCTGTCCGGGCGCCGCCCGTTCGCGGAGAAGCTGTGGTCGGACCTCGCGGAGACGTTCTTCCCCGACGACCCGTTCCGCGGGTTCGGCGCGCTGCCCCCGGCCAGGCGCGCGTGGTGCGCGGTCAAGTACTTCGTCCCGGCGCTGGACTGGGTCCCGCGCTACGGCCTCGACAAGTTCAAGTTCGACCTCCTCGCCGGCATCACCATCGCCAGCCTCGCCATCCCGCAGGGCATCAGCTACGCCCGCCTCGCCAACCTCCCTCCAATCATCGGCCTCTGTACGTGTACTGCGCGCTCGGATTTATTACTAATGCGTTTCTGCATGCGCACGCACACCCGATGAATTAATTGGTTTTTTTTTTTTTGGGGTTGCCAGATTCGAGCTTCGTGCCGCCGTTGATGTACGCGGTGTTCGGGAGCTCCAACAACCTGGCGGTGGGGACGGTGGCGGCGGCGTCGCTGCTGCTGGCGTCCATCATCGAGACGGAGGTGGCGGCGGACGAGAACCCGCAGCTGTACCTGCAGCTCTTCTACACCGCCGCCTTCTTCACCGGCCTCTTCCAGACCGCGCTAGGCGTCTTTAGGTAAAAATAAAAAAAATTAAAATCAAACCCCAAACTAATCGCACTTCCATCATCTCTCTTCACTAATTCATCACTCGTTAACCCGGCCTGACGTTTTTAATTAACCTGTTATTACTATTACGTTACACTTGGCCTGTGAAGGTTAGGGCTAATAGTGGATTTCCTCTCGCGGTCGACGATCACCGGGTTCATGGGCGGCACGGCGATGATCATCATACTGCAGCAGTTCAAGGGCCTCCTGGGGATGAAGCACTTCACCACCAAGACAGACATCATCTCCGTCCTGCACTCCACCTACCATTACCGGCACGAGGTGCAATGCGAATTACCAGTTCAATTTCATCACGTAATTTAAATCTCTCCGTGATTAGTACTAGTAATGACTTCACTAAGACCTCTTTTTTTAAAAAAAATAAACAAAAAACAATTCACTTCACTAGTAGGAGGAAATAAAGAAAAGTTGGGTCGTTCTTTTGCTTCTCCATACTTCTACTTCTCCCGTGTTTTCTGGACGTATTTTTGGAGTTTTTTCTTAAGAATTTTAACGGCGATTGTTCCTCGCTGTCCTGGATGTGTAACCGCTATAAATAGCATGCAGCCGCACGTTTCGAGAGGGATAAACTGCGAAGTAGTTGAGTATTTCCGAATTCCGAGGATGTTGTTGTAACCTCTCCTGTAAACTTCTCCGAGAAATAACCGCGACTAGTGTAAGGAATCTCGACTGGATTGCAGCTAGGACTTTCTCGATTAGTATATCGGCTGGATTCGTGTCGAGTCGTTAACAACTTCAGATCAAAACAAGGTTTGCATCGATGATGCGTACGTGCAAACAAACAATAATACTATTTGGGTGTCGCTGGATCTTGTCTTTTTAAGAAAAGACCAATCATTGTTGGGCCTACAGTTTGTGCGCTGGACCGGTTGCGTGCACCGAGGAAATGCTCGGGATTGTTTTTGACGGGAAACTATTTAAAATCTATCTCAAGGGTCGTCCTTTTCATCTATTTAGGCATTGTTTAGTTTGCGAGATAAAAAGTTTTGGCGTGTCATATCGGATATACGGACATATATTTAAAGTATCTTTTTTAGCGTGTCATATCGGATATACGGACACATATTTAAAATATTAAACATAGATTAATAACAAACAAATTACATATTTCACCTGAAAACTGCGAGATGAAGTTATTAAGCCTAATTAATCCATCGTTAGTAAATGTTTACTGTAGCACCATATTATCAAATCATGGAGCAATTAGACTTAAAATATTCATATCACATTTTGCACGCAATCTGTGTAATTAGTTTTTTTTTATACTAGAAAAAATACCCGTGCGTTGTAACGGGTGAATTCTATTTTAATCTTATTATTATTATATGGTTTAGTTAAAATGAAATTCACTGTGAGAGTTCACTTGGATATATATATTTTATAAAATCATGAGTTGCAGTTAGGAGTCCGATCATCTCAAGTTAGCATGCAAGTTTTTTTTAAAAAAACAGAATTTTTATATAATTTCTTATGTATTACCAAAAGTGAACGATCTTAAAAACCGACTCAAATACGGATATGTATTAACAAAAGCAAACGAACTTAAAAACCGACTCATACACGGATGACGTATCAAAATACCAGCAAAAACATCTTTAATTTTTATAATAGTAGAGATTTAATACTCCATACATATGTCGAAACATTCGATCTGATAGTGTAAAAAGTTTTTGTTGGAGAACTAAATAGTGCCTTACATGTCACTTAAATAATTATATTTTTTTATAAATTTAATAAGATACATTAATATATGATAGATCAATCCACAATTAAACTTTAATTTCTACATGTTTTAATAAAAAACAAATTTAATTGTTAGTATATGTTAACTAGCTGTAGTTTAATTTATTTTTTTTAACTTGTAGAAGTTGAATTTTAAATTATATATTTAATAAGTGATATATAGCATGTTAATCCACTCTCTTTCTGTTGTACAGCCCGTAGCTTTCTGAAGATTTTTTTTACCAGCATTATATGGCCAGTACATTGGTAATACTGGTACATGCCATGTTGACCTTGGTCAATGTCATGTGAGGAATGGTACATGCCATTGCGATTTTTCAGAAACACCAGACGTGTAGCACACTAGCATATGTTCCTTTTTTTTTCTTTGTAATCGCGGGTAAATGATTTCAGAGTGGAAAAATTGCAGGAATAAGATTCTGAACTGAACCTTTTGTTTATGTTTTTTTTTAACTCTGCAGTGGAAATGGCAGAGTGCAGTTCTCGGCATATGCTTCCTCTTGTTCTTGCTGTCGAGTAAGCACCTGGTAAGTGGGGGAATCAGGAGACTGATGAATCTAGCCAAACAACTGTACCCATACGCTAAGCTACTGCTACTTTATAGAATGATCCGTTTTATATTCATATAAGTTTTGTTTCTCCAAAACTTCAGAGAAAGAAACTGCCAAAGTTGTTCTGGGTGTCGGCCATTGCGCCATTCATGGTTGTCGTCATCGGAGGCATCTTCGCTTTCCTCGTCAAGGGTGACGAGCATGGAATTCCGATAGTAAGTCAGTCGTCCATGCCAAGACGATTCAAGCTTCAGAGAAACATCAATATTTTTTTTTTCTGTTTTCCTGACAACATGCGCTAAAACGCTGCTTAACTTGGGACAGGTCGGTAACCTGAATAAAGGGATCAATCCCCTGTCCATTGCGCAGCTAACGTTCCAGTCCAGGCACATGAAGACGGCAGTGAAAGCTGGTCTCTTGTCTGGGATCCTAGCACTGGCAGTACGAACATGATCTTGACTCAAACTCCCTCATCAATCACTTAAACTTTACACTCTAATTCACCGGAGTTTCTGATCGGCGGCCATCGATGCTTCTCCAGGAAGGAATAGCCGTCGGCCGAAGCTTGGCGATGGTCAAGAACGAGCAGATCGACGGCAACAAGGAGATGATCGCGTTTGGTATCATGAACATCGCCGGTTCTTTCACCTCCTGCTACCTCACGACAGGTATAAATCTTGGCCTCTGCGACCTTTGTTCAGAAAACCAGAACCATGATACATTTGGCAACATTTTGTCTGACGATGTGCTGCTTGTTTCAGGGCCGTTCTCAAAGTCGGCGGTGAACTTCCACGCCGGGTGCAAGACGCCGATGTCGAACGTGGTGATGTCGGTGTGCATCATGCTGGTGCTACTGTTCCTGGCACCCCTCTTCAAGTACACCCCGCTGGTGGCGCTCTCCTCCATCATCGTCGTCGCCATGATCGGGCTCGTCAAGGTCAAGGAGTTCTGCCACCTCTACAAGGTCGACAAGTTCGACTTCTGCATCTGCATGGTCGCCTTCCTCGGCGTCGTCTTCTTCACCATGGTCGCAGGCCTCAGCGCATCCGTGAGCATCGCCAACTTAAACCTTGATTAGATACTACTCCGTAGCACATTTCTCTGCACGATGCTGATGTGCTCCCCTTGGCTGTGCATTTTTGCAGGTAGGCTTGTCAGTTGTCAGGGCGTTGCTGTACGTGGCCAGGCCTGCCACCTGCAAGCTCGGGAACATAGCAGGGAGCGAGACCTTCCGCGACGTGAAGCAATACCCCCAAGCGAAGAGCATCCCTGGCATCCTCGTCTTGCAGCTCGGCTCTCCCATCTACTTCGTCAATGCGGGTTACCTGCGAGAAAGGTGACGGCAATGCAGGACGCTGAAGATCATCGCTGATCATTTTTTTTCTCTCTCGATTGGATGCTAATTTAACTTACCCTGCCTTGCAGGATTTTGAGATGGGTGGAAGATGAGGATAACCTGTGCAAGAGCGTCGGGCACGATTTGCAATACTTGGTTCTTGATCTTGGTGGTATGACTGTCTGAATCTTCGCCCTCTTCCATTTCAGCGTAGCGACTCTCATCCTAGAATTCAGGCCACTGATAAGTGATAACTAACTTGGCATATGTCTGAACATTGCAGGTGTCACTTCTGTCGACAACTCTGGAGTTGGGATGCTACTAGAAGTACACAAGAGCCTCGAACGAAGAGGGATCACGGTTAGCTATCTATCACGGGAAACTATTCTAATCCCTTGAGGATTCCCTCGTTTGCATAAAAACCATCTAAACGGTTATGAAAAATTCTAGAAAAATTTGACAACATTCATATAACACATATATACAACTCCATAAAATCTTAAGTCCAAACTCAACTCACACGCCAAGATATAAAAAAGACAAAGTCAGCGTATGAATAGTAGCGTACTGTTTATATCTAAATTTGTCTTTTTTATTTCTCGATGTGTAGATCGAATTTGAACTTGAATTTTGGTGGACTAGTAGGTATCATTGTACTCTATATTGTCAATTGTTTTTAGAATTTTTCACAACTATTTGCATCGAATTTAGAAGAAAAAGGTATACGAGGGGATATCCTCGAGAGGATATCACAGCTCATCACTCCCTCTGAAGTCTGAAACTTAACCGCAGAATTTGATCTGTTTTACACATGCTTAATTTGGTCATTGCAGATAGCTCTGACGAATCCGAGGCTAGAGGTGACAGAGAAGCTGGTGCTGTCTGGATACGTCAGGGACATCTTAGGGGATGAGTGGGTCTTCCTGACGGTCAAGGACGCCATCACGGCGTGTCGATACGCGCTGCAGATATCCAGAAATAAGGGAGAAGACGAAGTATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA004346

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA004346&oldid=42070"