BGIOSGA004378

From RiceWiki
Revision as of 11:05, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA004378| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA004378, complete gene.| tag = OsI_035...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA004378

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA004378, complete gene.

LocusTag

OsI_03581

Ensembl Transcript ID

BGIOSGA004378-TA

Ensembl Protein ID

BGIOSGA004378-PA

Length

3654

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:33471631..33475284

Sequence Coding Region

33471631..33471893,33471988..33472123,33475069..33475284

Genome Context

<gbrowseImage1> name=IndicaChromosome01:33471631..33475284 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:33471631..33475284 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGCTCCATTGGCAACGGCCGGAATGGCTCGGAGGTTGGCATACAGATCCCAGCGATGGGGAACAAGGAAGTGCTGGAGCGACCTGCCATACCAAGATGGCCACGGCTAGGCGTCGTCATGGTGGCAACTAGAGCTGTTGCCCTGGTGATGGCAGTGCTCTCAATGGCTCTAATGATCTCTGCCAAGCAGCGGGGTAGTCTCAAGATCTTCGGCATCGAGATCCCGCTTTATGCCAATTGGTCTTTCTCTGATTCCCTAGAATACTTGGTTGGGATGTCTGCAGTTTCAGCTGCCTACTGTCTCGCTCAACTTTTATTGACTGCACACAAGGCCGTGAAGAATGCCCCTGTGGTTCAATCCAGGAACTATGCCTGGCTTCTGTTTACTGGTGATCAGATCTTCGCATATGCAATGATGAGTGCTGGATCAGCAGCGGCGGCAGTCGCGAATCTGAACCGCACCGGCATCCGGCACACGGCGCTCCCCAACTTCTGCAAGCCACTGCCACGTTTCTGCGACTTGTCAGCGGCCTCCATCGCGTGTGCCTTTCTCAGTTGCATCTTCCTTGCGGCATCTGCTGTGATCGATGTCATCTGGCTGTCAAATATGTGA</cdnaseq>

Protein Sequence

<aaseq>MGSIGNGRNGSEVGIQIPAMGNKEVLERPAIPRWPRLGVVMVATRAVALVMAVLSMALMISAKQRGSLKIFGIEIPLYANWSFSDSLEYLVGMSAVSAAYCLAQLLLTAHKAVKNAPVVQSRNYAWLLFTGDQIFAYAMMSAGSAAAAVANLNRTGIRHTALPNFCKPLPRFCDLSAASIACAFLSCIFLAASAVIDVIWLSNM</aaseq>

Gene Sequence

<dnaseqindica>1..263#358..493#3439..3654#ATGGGCTCCATTGGCAACGGCCGGAATGGCTCGGAGGTTGGCATACAGATCCCAGCGATGGGGAACAAGGAAGTGCTGGAGCGACCTGCCATACCAAGATGGCCACGGCTAGGCGTCGTCATGGTGGCAACTAGAGCTGTTGCCCTGGTGATGGCAGTGCTCTCAATGGCTCTAATGATCTCTGCCAAGCAGCGGGGTAGTCTCAAGATCTTCGGCATCGAGATCCCGCTTTATGCCAATTGGTCTTTCTCTGATTCCCTAGAGTAAGTATCAAAGCTGCTCTATTTCGAAATGTGTTAAGCTCATACAGAGTACTGAGTCGTTCTGATTTTCTGATGGTGTTGTTCGGGATTTCAGATACTTGGTTGGGATGTCTGCAGTTTCAGCTGCCTACTGTCTCGCTCAACTTTTATTGACTGCACACAAGGCCGTGAAGAATGCCCCTGTGGTTCAATCCAGGAACTATGCCTGGCTTCTGTTTACTGGTGATCAGGTTCGTCAATGCTTGTCCATTTGGCTTGATCTTAACTCTCTGAAATCACCGGCGCTTGCCACGGCCGCAGGATGGGGGTGTCGCCGGCACCGGTAGAGTAGGGGGTGTTCGCTGGCACCGGTAGAGTAGGTATGGGGGTTGGCCTACTTCGCCCAATTGGTGGGTCTGCTCCTGCCCATTTTGATCTGATTTTGCAATGACGAATAGGTTGCCTTGGTTTTTTATGCTGTGATGCTTGCTAGATTGCATATTTTATACTCTTTATTTTCATGTTTCTTGTGGTACATCAATGACCCGTTCAGGATTCCTCTTTGTATTTTATGGAACAGTCAGTAACCAGTACTAGTATAGGCAGTATTGATTGGGTGTTTGGGGTTAGTTCTAATAAAAGATGAGCAAGTTCTTGCTGGCAAGTGGTATCTTGGAACAGTTTATTTAATCTTCTTGTTGTCAACTTGCCACGTCCATATGCATGCTACATCAAAATACTTTCTGCAACTTGGTTTAGATTTACTGTTTTTCCCCAAGCCATAAGAAATCATTGGAATTATTCTGATTCTTGTGCATCTGGTTGTGGACTTACATATGGAATTGCAATCCTTTCTAGATGATTGAACTTGATAACCTAATATATGCAAGAAATATGCGGAATATAATCACTTCATTTAGGATAAATTATTTCTTGTGTTTTTGTGGGATTCGTATTTGAAACAGACTTGCAATATTTGAACAATACTTCTACAGATATATAATATGTGGTTTTGTTGTGATAGAGCCAAAACCAAGCAAATCCCTAAGCACCAAAAGAGCTGGGATTTGCAAGAACAGAATACTGTCGGGAACTTCTTAAGCAAACTCCATACCTAACAGGCAACTAAGCAAAGAGAAAAACAACCATATTTGTGCAAGATAGTGGTCCTAACCTCTTATAGAAAATGTTCTTGGGATTTTTTTTTTTTGGTTCTACACAGTTTGTGCAAAAATAAAAAGTTTGATGCACAACAATGGTCTTTTGTTCCAAAACCTCGTAGCAGTTGTCAGTTGATAGCTGATGAGAGTGATGACACTTGAGCCTGAGTACACAGAGCTCAAGCATTTTACACAATTTCTTGAGGGCACCTCCACTTAATGTTTTTGTGAATGGATTTTCCATGGTAAAATGCATAAATGTGACGTAGCTCTTTCAGGATTTTTTTTCTAAGGCACCAAATGTAATATATGAATCTTCTTCCAAAAAGTGGGCACAGAGGGATTGACATGTTGTTGTACTGGAATTTTGTGCTTCCATGTCCAAATCTTGTGCAGTATCTGTCATTAGAAGCGTCTTGCTTATCTATTCTTTCTATAAAGTTAAAGCCCACTAAGATGGTGTTTGGGAAGGAGGGACTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCGAAGGACTCATCAGTGGTTCTCCTCTATTGTGATATCTCTTTATTGACCATCTCCTCTAACTGTTTCTCTTTCAACTCTTTTTCCTCAGCATTCTCATTTTCCATCTGGCTGCAGCTAGAGAGGCCTGCACTAACTCCTTAGCTCTAAGTGTCTCAATGTTAGAATTTATTTCAGCATCACTATTACCTAGATTAATATTAGCAGCTACCGCTATAGCATTCAACTCAGCTGCATCAATAAGTTGGAAAATTGCAAAAGGATTTGAGTTGTTACCTGGTGTCTCCAAGTTCTTCTTCTGTGTTAGGATCTCAGCTCTCTTAGTGACTGGAATGGTTGCCATCTCTCTATTCCTGAGGCTCATCCTAGATGAGATTGCAGGTTCTGTTGATTTGCTCTTCCCTTTCTTTCTGTGTGAAACCTCTTGAAAACTGATTTCTTCCTCCTTGTCTTCTTCCTCTCTTAGTCTTTCTATATCTGAATCAGTAGGTATTGCACATTTCTCCAACTCATCATCCCACAAAGCAGCATCAATCTGCCCAGAAAACTCCTTCTCTTGAGAGTGCAGAGGAGCAGATAGAGAGAAGTCAATTTCCTGGGATTCTTGTTCCATAGGGACTATCTCCATCTTTTTCTCCCACAACACCAGCTCAGTTGACTCTGTGTGCATTGGTTCCTGCTGTAGTGACACTAACTCTTTCTTTTTTTCTTTCTCCAAAACCAGTTCTGAGGATGAGATAGTAGAGGTTTTCTTAGAGGCAATCTTCTTGACATAACCACCCTTATATTCCTTGCCTTTGTAAGCAGGTGGCGCAGAGTGTCCACCCCTTGATGAAGCACCTGTATTCTGGTTCTGTCTACCTCTAGTAGGGCTTTGCATCTTGTAATCCTCATCAACATTCATGTCTTCATTGCCGTCATTCTCGTCTTTGTCATCTTTGTCATCGTCATCAGGGTGAATTGGTCTATTCTCAATAGACGAATACCCTTCTGGCTCCCATCTGATTAAGTATCCCACTTTGTTGATATAGACATGCATCCCGAAGTGTAATTCCCTAGGGGTCCTTACAAGCAACTCTCACTCTGATTGGACCATCTCTTCTGATACTAGCACCATCTAGAGCTTCAAATTCCCCCACCAACTCAGCAATGGACTTAATAGCATCCTCATTCCTAGCAATCTTTGGTATGCCATATACTTTGACCCAAACAGCAACTAGCTCATCAACAGCCTCTTCTGTCATACCTGTCTCCACCACACTAGCCTTGATTAGAGAGGTCTCAAAATCAAAGCTCTTGCAAGTGGATATTTTACTTCTCACATCATCCGATGGAAAGTTGATTAAAAACTCTTTGTCATTAAGCTGCTTTACTTTCCATTCCCATTGCAACCCCACAACTTTCTTTAGTTCAACAAATAGCAGCTGAACTTTTGGCTTTGGCCTGACATTTCCCGTGGAATGCAAGATTAACATCTAACTTCTGCTGTTTTTCATTCGCGTGCAGATCTTCGCATATGCAATGATGAGTGCTGGATCAGCAGCGGCGGCAGTCGCGAATCTGAACCGCACCGGCATCCGGCACACGGCGCTCCCCAACTTCTGCAAGCCACTGCCACGTTTCTGCGACTTGTCAGCGGCCTCCATCGCGTGTGCCTTTCTCAGTTGCATCTTCCTTGCGGCATCTGCTGTGATCGATGTCATCTGGCTGTCAAATATGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA004378