BGIOSGA004414

From RiceWiki
Revision as of 11:06, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA004414| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA004414, complete gene.| tag = OsI_036...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA004414

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA004414, complete gene.

LocusTag

OsI_03652

Ensembl Transcript ID

BGIOSGA004414-TA

Ensembl Protein ID

BGIOSGA004414-PA

Length

2450

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:33923923..33926372

Sequence Coding Region

33923923..33924260,33925952..33926372

Genome Context

<gbrowseImage1> name=IndicaChromosome01:33923923..33926372 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:33923923..33926372 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTCACCCTCCTCCTCGCCTTCCGCCTCTCCACTCTCTTCCTCCTCCTCCTCCTGGCCGCCGGCGCCATCGCCGTCGATCCCGATGGCGCCGCCGCGCCCGATACCGCCGCCGCGCCCGATACCGAGGCGGCGGCGCTCCTCCGGCTCAAGGCGTCGCTGATCGACCCGACGAACGCGCTAGAGGCGTGGTCGCCGTCGTCGCCGTCGCCGCCGTGCGATGAAACACACCGGTGGCCAAGGGTGCAGTGCTACAATGGCGTCCTCATCGGCCTCCGCCTCGCCCGCCTCAACCTCTCCGGCGACTTCGACTTCGCGGCGCTGTCGCGGCTAACCGGTCGAGGGGCCACTGGCAGCGGCGGATCTGGCCACAAGCTAGCTGAATCCGAGGGTGACCTCGCTAGATCTGCGACGGTGGTGAACGGCGGTGACCTTAGCGGTGGCGACTTGGAGCGGCGACACGACCTCATCGGCGACATGGAACGGCAACGCGACCTCGGTGGCGGCGACGATCACCACAGCAAGTTCTCCTTGACCTCTCCTTTTCCCCAAGCACGTCACGAGGCTACGGTTCTCCCCCAATGCGTGGTCCCGAGTAGTGGTTTTGCACCTCCCGAACTAAAGAACGGAGAGGAAATTGTTTCCTCTACAAGCACAGTTATGTCCTGTGGAACCACACAACTGGCTGCCAACTCGGCTGAGCTCCAACATAAAGGCTTGAGACTACATAGCAGAGTGGATCGTTGTATATGCCCTTAG</cdnaseq>

Protein Sequence

<aaseq>MVTLLLAFRLSTLFLLLLLAAGAIAVDPDGAAAPDTAAAPDTEAAALLRLKASLIDPTNALEAWSPSSPSPPCDETHRWPRVQCYNGVLIGLRLARLNLSGDFDFAALSRLTGRGATGSGGSGHKLAESEGDLARSATVVNGGDLSGGDLERRHDLIGDMERQRDLGGGDDHHSKFSLTSPFPQARHEATVLPQCVVPSSGFAPPELKNGEEIVSSTSTVMSCGTTQLAANSAELQHKGLRLHSRVDRCICP</aaseq>

Gene Sequence

<dnaseqindica>1..338#2030..2450#ATGGTCACCCTCCTCCTCGCCTTCCGCCTCTCCACTCTCTTCCTCCTCCTCCTCCTGGCCGCCGGCGCCATCGCCGTCGATCCCGATGGCGCCGCCGCGCCCGATACCGCCGCCGCGCCCGATACCGAGGCGGCGGCGCTCCTCCGGCTCAAGGCGTCGCTGATCGACCCGACGAACGCGCTAGAGGCGTGGTCGCCGTCGTCGCCGTCGCCGCCGTGCGATGAAACACACCGGTGGCCAAGGGTGCAGTGCTACAATGGCGTCCTCATCGGCCTCCGCCTCGCCCGCCTCAACCTCTCCGGCGACTTCGACTTCGCGGCGCTGTCGCGGCTAACCGGGTTGCACTCCATCAACCTCATCCGCAACAACTTCTCCGGCCCGCTGNCGGCGAGCCTCGCCGCCGTGCGCAGCCTCCGCGCGCTGTACCTGTCCCGGAACGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCCGCCGCTGCCGCCACCGCCGCATTCCCGCTTTCTGTCGTCGTCTTCACCACCGGCAGCGGAGCACCATCAGACGGCCCCACATCTCCAGCGCCCGTCGCCTCCTCCATTCCTTCCAACTCGCTTGACCGAGGCGGGCAGCCGCAGGAGCTCCTCCAGCTTCGGCCACCGGCGTGGTGCTAGTGCTCTGCTTCCGCGGCATTCTCTCGCCGGAAAAAAAGAGAGAAGAGAGAGAGGAGGAACCGAGGAAGAGAAGAGGCAGGGGAGGGATGACGTGGCATCCTGACATATGGGGTCCACGTGGATCCCACGCTGACTCAGCCGTCACGTAGGATAAAACCGGGTCAAAACCACCGAGGGATCTATTGTGAATTTGTGACCGGTTTCGATTAGTTAAGGGATGCCGGATATCTGGTTTTGCGGTTGAGGGACGATTTTGTAACTCGATGACAAGTTGAGGGACCTTTGGTGTACTTTTTCCGTCTTCTTGCCTTCTCTTCAAAAAAAAAAAAAGAAAACCGATGGGCTTCTTAAAATTTTAAGAGTATTGTTCACAACGAAATGGAAGTCTGCATTCTGTAAGGTCGAAGGACTAGCACCTTGGACATTTGGTACTTCACTTGAGACTGGGCCGGTTTATGGGCCGTATTCAAATTAGCCTGGACTGCCGGAAGGTCTAATAACTTATTTTCCCCTTCTCAGTCACACTTCTCAGAAGGTCAAAGAAGAACTACCAACGCAAAATAAAAATAAAAAAAAGGGTCAAAATACAAGTCACGGACACTTCACGGGAGCTGAAGAATGTCACACACTTTACTCGTACAGAAAAAGAGACAAGGACGCAAGGGTCACTGCACAAAATTGTTAGTGACGAGAATCCTCTAACTTATTTTTCTCTGATTTTAAGTTACTGATATGTGAACCCATTAAGGCATATACAATGAAGGCCACTTGTACTAGTCGTATCAACGTGCCAAATAGGATAAGACCACATGAAAGCCACACAATCTACAATGGAGATCACTATCGAGTATATTTTTTTTATCGGCTCCTGGTTATTTATGCGTCAATCCTTAGTTATTGAATCAATTAGAAATTTTATATTTTGGACCTTATAACAACAAAAAGAAATAGATATATACCCTTGAACTACACAAGGACCCAATATCATCCTCTCCTCCTTTTCTTTTTTTCTCACCTACCCCACTTCCTCTCTTCCCCAATTCCCCACCGGCCACCGAACCCAATCCCCGACTCCGAGTCTCGCCGTCGTCGCCTCCTCTTTCGCCACCAAATTGGCGTTGCCTCTCCCCATCAGGTACTCCGCCTCTCCCTCTCTCCATCCACCGCTACATAGTCCTCCCTTTTCCACCGCCATTATCCTCCTCCCCATCCACCGTAGCAAGCTTTGAGGGCGGCTCTCCCCTTTTCCTCCTCTTCGTCCGACGTGTCGCTCTCCCTCTCTCCTTCTCTTTGGGCGACGACGGCAGATCTAGCCGCATCTGTCGGCCTCTACCCTCCCGCCCCCTTCTCGCGACAGTCGAGGGGCCACTGGCAGCGGCGGATCTGGCCACAAGCTAGCTGAATCCGAGGGTGACCTCGCTAGATCTGCGACGGTGGTGAACGGCGGTGACCTTAGCGGTGGCGACTTGGAGCGGCGACACGACCTCATCGGCGACATGGAACGGCAACGCGACCTCGGTGGCGGCGACGATCACCACAGCAAGTTCTCCTTGACCTCTCCTTTTCCCCAAGCACGTCACGAGGCTACGGTTCTCCCCCAATGCGTGGTCCCGAGTAGTGGTTTTGCACCTCCCGAACTAAAGAACGGAGAGGAAATTGTTTCCTCTACAAGCACAGTTATGTCCTGTGGAACCACACAACTGGCTGCCAACTCGGCTGAGCTCCAACATAAAGGCTTGAGACTACATAGCAGAGTGGATCGTTGTATATGCCCTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA004414