BGIOSGA004430

From RiceWiki
Revision as of 11:06, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA004430| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA004430, complete gene.| tag = P0638D1...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA004430

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA004430, complete gene.

LocusTag

P0638D12.23

Ensembl Transcript ID

BGIOSGA004430-TA

Ensembl Protein ID

BGIOSGA004430-PA

Length

2812

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:34086014..34088825

Sequence Coding Region

34086014..34086059,34086408..34087682,34088559..34088589,34088696..34088825

Genome Context

<gbrowseImage1> name=IndicaChromosome01:34086014..34088825 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:34086014..34088825 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCATGTGGCTTTTGTTGCGCTCCTCTTCTTGCTGCTCGTCGGGCATTGCCTCGGAGGCAAGGTTGGCATCTGCTACGGCCGCAACGCCGATGACCTGCCGGCGCCGGACAAGGTGATGCAGCTCATCCAGCAGCAGTCGCTCAAGTACGTGCGCATCTACGACACCAACATCGACGTCATCAAGGCCTTCGCCAACACCGGCGTCGAGCTCATGGTCGGCGTCCCCAACTCCGACCTCCTCCCCTTCGCGCAGTACCAGTCCAACGTCGATACCTGGCTCAAGAACAGCATCCTCCCCTACTACCCGGCCACCATGATCACCTACATCACCGTCGGCGCCGAGGTCACCGAGAGCCCCGTCAACGTGTCCGCTCTCGTCGTGCCTGCCATGCGCAATGTGCATACTGCCCTCAAGAAGGCCGGCCTGCACAAGAAGATCACCATCTCGAGCACGCACTCGCTCGGGATACTGTCCCGGTCGTTTCCGCCGTCCGCGGGGGCGTTCAACAGCAGCTACGCCTACTTCCTGAAGCCGATGCTGGAGTTCCTCGTGGAGAACCAGGCACCGTTCATGGTGGATTTGTACCCCTACTATGCGTACCAGAACTCACCAAGCAATGTCTCGCTGAACTACGCGCTGTTCTCGCCGCAGTCTCAGGATGTGATTGACCCCAACACCGGACTGGTTTACACAAACATGTTCGATGCGCAGATCGATTCCATTTTCTTTGCACTGATGGCTCTGAACTTTAAGACTCTGAAGATCATGGTCACCGAGACAGGGTGGCCAAACAAAGGGGCAGCTAAGGAGACCGGAGCAACACCTGACAATGCTCAGACCTACAACACTAATCTCATTCGTCATGTTGTTAATGACAGCGGCACACCTGCAAAACCCGGGGAAGAAATTGATGTGTACATTTTTTCATTGTTCAATGAGAACAGGAAACCAGGAATTGAGTCTGAGAGGAACTGGGGGCTGTTCTTCCCTGACCAAAGCTCTATATACAGTCTAGATTGGACTGGCAGAGGCAATGTGGACATCATGACTGGAGGAAACATTACAAATGCAAATGGTACTTGGTGTGTTGCTTCTGCTAATGCGTCTGAGACAGATCTACAGAATGGTTTAAATTGGGCATGTGGACCAGGCAATGTTGATTGCTCTGCTATTCAACCGAGTCAGCCCTGCTACCAGCCTGATACATTGGCATCACATGCTTCATATGCCTTCAACAGCTATTATCAGCAAAATGGAGCTAACGATGTAGCTTGTGACTTTGGCGGTACTGGAGTGCGGACAACTAAAGATCCAAGTTATGACACTTGTGTTTATATGGCTGCCGGGAGTAAGATGAGCACAACAAATTCATCCAACCTTCCAGTTCAAAGTGGGTTCAGCCCATCGCGATTCGACAAAAACTTCTACCTGTTGTTCTCCATGCTACCCATTATGATTGCTGCATGCATTGTGTGA</cdnaseq>

Protein Sequence

<aaseq>MAHVAFVALLFLLLVGHCLGGKVGICYGRNADDLPAPDKVMQLIQQQSLKYVRIYDTNIDVIKAFANTGVELMVGVPNSDLLPFAQYQSNVDTWLKNSILPYYPATMITYITVGAEVTESPVNVSALVVPAMRNVHTALKKAGLHKKITISSTHSLGILSRSFPPSAGAFNSSYAYFLKPMLEFLVENQAPFMVDLYPYYAYQNSPSNVSLNYALFSPQSQDVIDPNTGLVYTNMFDAQIDSIFFALMALNFKTLKIMVTETGWPNKGAAKETGATPDNAQTYNTNLIRHVVNDSGTPAKPGEEIDVYIFSLFNENRKPGIESERNWGLFFPDQSSIYSLDWTGRGNVDIMTGGNITNANGTWCVASANASETDLQNGLNWACGPGNVDCSAIQPSQPCYQPDTLASHASYAFNSYYQQNGANDVACDFGGTGVRTTKDPSYDTCVYMAAGSKMSTTNSSNLPVQSGFSPSRFDKNFYLLFSMLPIMIAACIV</aaseq>

Gene Sequence

<dnaseqindica>1..46#395..1669#2546..2576#2683..2812#ATGGCGCATGTGGCTTTTGTTGCGCTCCTCTTCTTGCTGCTCGTCGGTGAGTCGTTCAACCACACCGCGTTCCTTCTTCCGTTGCTCTCGCTGTTTGCGTAGTAGTGATACTTTTGTGGGGAGAGTGTTCAGTGAGTGAGTGCTACTGCTAGATGCCTTGCTTGCCGGTGAGTGTAGCAACCTGCAGATGTGGGACAAGAATACGATTCTTCTTGTTTCATGGTCCAGTTGTTACGATGCACATTGAACTTGTTCGTTCTTTTGGGGTGAAATCACTCATTTTATCGATGTGTATTTCAAGATTGTTTCTTTTTTTTTTGGGAGATGAAGAAATGGAAGAGAAATGATCACTAAAACTATGAAAAATGCATGATTGCAAATGTGGCTTTTGCAGGGCATTGCCTCGGAGGCAAGGTTGGCATCTGCTACGGCCGCAACGCCGATGACCTGCCGGCGCCGGACAAGGTGATGCAGCTCATCCAGCAGCAGTCGCTCAAGTACGTGCGCATCTACGACACCAACATCGACGTCATCAAGGCCTTCGCCAACACCGGCGTCGAGCTCATGGTCGGCGTCCCCAACTCCGACCTCCTCCCCTTCGCGCAGTACCAGTCCAACGTCGATACCTGGCTCAAGAACAGCATCCTCCCCTACTACCCGGCCACCATGATCACCTACATCACCGTCGGCGCCGAGGTCACCGAGAGCCCCGTCAACGTGTCCGCTCTCGTCGTGCCTGCCATGCGCAATGTGCATACTGCCCTCAAGAAGGCCGGCCTGCACAAGAAGATCACCATCTCGAGCACGCACTCGCTCGGGATACTGTCCCGGTCGTTTCCGCCGTCCGCGGGGGCGTTCAACAGCAGCTACGCCTACTTCCTGAAGCCGATGCTGGAGTTCCTCGTGGAGAACCAGGCACCGTTCATGGTGGATTTGTACCCCTACTATGCGTACCAGAACTCACCAAGCAATGTCTCGCTGAACTACGCGCTGTTCTCGCCGCAGTCTCAGGATGTGATTGACCCCAACACCGGACTGGTTTACACAAACATGTTCGATGCGCAGATCGATTCCATTTTCTTTGCACTGATGGCTCTGAACTTTAAGACTCTGAAGATCATGGTCACCGAGACAGGGTGGCCAAACAAAGGGGCAGCTAAGGAGACCGGAGCAACACCTGACAATGCTCAGACCTACAACACTAATCTCATTCGTCATGTTGTTAATGACAGCGGCACACCTGCAAAACCCGGGGAAGAAATTGATGTGTACATTTTTTCATTGTTCAATGAGAACAGGAAACCAGGAATTGAGTCTGAGAGGAACTGGGGGCTGTTCTTCCCTGACCAAAGCTCTATATACAGTCTAGATTGGACTGGCAGAGGCAATGTGGACATCATGACTGGAGGAAACATTACAAATGCAAATGGTACTTGGTGTGTTGCTTCTGCTAATGCGTCTGAGACAGATCTACAGAATGGTTTAAATTGGGCATGTGGACCAGGCAATGTTGATTGCTCTGCTATTCAACCGAGTCAGCCCTGCTACCAGCCTGATACATTGGCATCACATGCTTCATATGCCTTCAACAGCTATTATCAGCAAAATGGAGCTAACGATGTAGCTTGTGACTTTGGCGGTACTGGAGTGCGGACAACTAAAGATCCAAGTAAGTTGCCACCATTCGTATGAAATCTATATCGGTTATTGTACCATTTTACAATTCCTATGTACTACCTACTAGTGGATGTTTTGGTGAGGTCTGCATCATAGTGTTGTAGCTCAATGAAAGCATATAACTGGAACTAGCATGTGCTGATTATGACCTGTTTATGATGGTAAGTGGTAACATAGGTCCTTGACCGAAATTGTAGTGATAGCTGATAGATAAGCTGGTAATAGATGCTGCAATACTGGCTAAATTTCTGACTTGAACTAATATTCAAATGTTTATGGTTTTTGGTGACATGGATAATACATATGTAAGTATGTAACTGTAATAACATGCTTGTTGTCAATTTGAGTTGTCCGTTATATTTTTCTGGTTCGCTGTTCTCTTGTGCATTGCTTTGTCTTGCATTATCTCTTGGGAGTTTGCTAAGTGTTGATAAGTATTGTTGATTTGGCATGTATGGTATTCATGCTCTGCTCTATTTCACTAGTTAATAGTATTCTCAATGTTCCAACTCTGTTGATCTTGTGGTGAGAACACTAATAATGTTCGTAGGAAATTCCTAGCCCTTGTGCATGGATCAGCACATGCTTTTGTAAATCATGGATATCAAAATTTGATGATGGATATTGTGTATTAATATGGGTTACCGATGGGTAGGTTGCTGGTCCTTAGACCTTAGTCCTTCAAAATGCTATGTGGAAGTGGAACAACCTTCAAGACCAAACTAAAACTATAAAGATATTGATGGTTACATCCATGCCAATTATTGTTACAATGGAGATTTTGCATACGCTCGATTGTTTAGTACTACTAGAATATAAGATGAAGGTATATTGAAATGTGATGATGAATTGTTTTGCTTGCGTGCAGGTTATGACACTTGTGTTTATATGGCTGCCGGGTATGGAAAAGCTTTCTCATATCTTTGTTCAATTTTTTTGAAGCATTTTTTCACCAACTCCTTTGAGAAATAGTTCTGCTGACTATTGTTTTTTCCTCCCTTGAAGGAGTAAGATGAGCACAACAAATTCATCCAACCTTCCAGTTCAAAGTGGGTTCAGCCCATCGCGATTCGACAAAAACTTCTACCTGTTGTTCTCCATGCTACCCATTATGATTGCTGCATGCATTGTGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA004430