BGIOSGA004441

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Revision as of 11:06, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA004441| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA004441, complete gene.| tag = P0439E0...")
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Gene Name

BGIOSGA004441

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA004441, complete gene.

LocusTag

P0439E07.33

Ensembl Transcript ID

BGIOSGA004441-TA

Ensembl Protein ID

BGIOSGA004441-PA

Length

4350

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:34283334..34287683

Sequence Coding Region

34283334..34283431,34283819..34283939,34284027..34284101,34284221..34284372,34284529..34284634
,34284767..34284832,34284920..34285015,34285122..34285193,34285283..34285366
,34285505..34285603,34286081..34286128,34286217..34286270,34286351..34286449
,34286542..34286631,34286731..34286808,34286944..34287018,34287166..34287256
,34287374..34287502,34287595..34287683

Genome Context

<gbrowseImage1> name=IndicaChromosome01:34283334..34287683 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:34283334..34287683 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGGGGTGGCCACCGGTGGCGTGGAGGACGCCTACGGCGAGGACCGCGCCACCGAGGACCAGCCCATCACGCCGTGGGCCGTCTGCGTCGCCAGCGGGCACTCTCTGCTGAGGGATCCACGGCACAACAAGGGGCTATCATTCACGGAGAAAGAGCGAGACGCCCACTACCTGCGGGGTTTGCTGCCTCCAGTCGTGCTCTCCCAAGAACTTCAGGAGAAGAGGCTTCTGCAAAATGTGCGGCAGTTTCAGGTTCCTCTGCAACGTTACATGGCTCTGATGGACCTTCAGGAGAGGAATGAGAGGCTTTTCTACAAGCTCCTGATCGACAACGTTGAGGAATTGCTCCCCGTTGTGTACACGCCGACGGTGGGCGAGGCTTGCCAGAAGTACGGGTCAATCTTTAGACGACCACAGGGTCTGTACATCAGTCTTAAAGAGAAGGGGAGAATATTGGAGTTACTGAGGAACTGGCCAGAGAAGAGCATTCAGGTTATTGTTGTTACTGATGGTGAGCGCATTTTAGGTCTCGGGGATCTTGGTTGCCAGGGTATGGGAATCCCTGTGGGAAAGCTTGCACTATACACAGCCCTTGGAGGTGTCCGGCCTTCTGCTTGCTTACCTATCACCATTGATGTGGGAACAAACAATGAGGATTTACTGAAGGACGAGTTCTACATTGGATTAAGACAAAAACGAGCCACTGGCCAGGAATATAGTGATCTTCTGGATGAATTCATGGCTGCTATTAAGCAGCACTATGGACAGAAGGTGCTAGTCCAGTTTGAAGACTTCGCAAATTACAATGCATTTACCCTTCTTGAGAAGTACCGTGCAAACAATCTTGTCTTCAATGATGATATTCAGGGAACGGCTGCTGTAGTGCTTGCAGGCCTCATTGCTGCTCAGAAATTTGTCAGTGGGACTTTAGCTGATCACACATTCTTATTCTTTGGCGCAGGAGAGGCTGGTACAGGCATTGCTGAACTAGTGGCTCTCGAGATATCAAATCAGTCCAAAGTTCCAGTGGAAGATGCTCGCAAAAAGATCTGGCTACTTGATTCAAAGGGGTTGATTGTCAGTTCACGTAAAGATTCTCTTCAGCCCTTTAAGAAGCGATATGCCCATGAGCATGAACCAGTCAAAGATCTACTGGATGCTGTTAAGGTTATCAAACCGACTGCATTGATAGGTTCAGCTGGTGTGGGTCAAAGTTTCACAAAAAAGGTGATTGAGGCTATGAGTTCAATTAATGAGAGACCAATCATCCTCGCACTATCCAATCCAACATCACAATCTGAATGTACTGCTGAACAGGCATATTCATGGAGTAAGGGCCGTGCAATATTTGGGAGTGGAAGTCCATTTGATCCAGTTAAATACAATGACAAGCTTTTCGTGCCTGCACAGGCAAACAATGCATATATATTCCCAGGATTTGGCCTAGGCGTAGTGATTTCAGGAGCGATAAGGGTGAAAGATGAAATGATCCTTGCTGCTGCTGAAGGTTTAGCTGACCAGGTGACCCCAGAGCATGTTGACAAAGGCCTTATTTATCCACCCTTTTCCTGCATCAGGAAGATATCAGCCAACATCGCAGCCCGCGTTGCTGCAAAAGCCTATGACCTTGGATTGGCTAGCCATCTCCCTCGCCCAAAAGACTTGGTGAAGTACGCTGAGAGCTGCATGTACAGCCCCATTTACCGTTCTTATAGATGA</cdnaseq>

Protein Sequence

<aaseq>MAGVATGGVEDAYGEDRATEDQPITPWAVCVASGHSLLRDPRHNKGLSFTEKERDAHYLRGLLPPVVLSQELQEKRLLQNVRQFQVPLQRYMALMDLQERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGRILELLRNWPEKSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGVRPSACLPITIDVGTNNEDLLKDEFYIGLRQKRATGQEYSDLLDEFMAAIKQHYGQKVLVQFEDFANYNAFTLLEKYRANNLVFNDDIQGTAAVVLAGLIAAQKFVSGTLADHTFLFFGAGEAGTGIAELVALEISNQSKVPVEDARKKIWLLDSKGLIVSSRKDSLQPFKKRYAHEHEPVKDLLDAVKVIKPTALIGSAGVGQSFTKKVIEAMSSINERPIILALSNPTSQSECTAEQAYSWSKGRAIFGSGSPFDPVKYNDKLFVPAQANNAYIFPGFGLGVVISGAIRVKDEMILAAAEGLADQVTPEHVDKGLIYPPFSCIRKISANIAARVAAKAYDLGLASHLPRPKDLVKYAESCMYSPIYRSYR</aaseq>

Gene Sequence

<dnaseqindica>1..98#486..606#694..768#888..1039#1196..1301#1434..1499#1587..1682#1789..1860#1950..2033#2172..2270#2748..2795#2884..2937#3018..3116#3209..3298#3398..3475#3611..3685#3833..3923#4041..4169#4262..4350#ATGGCGGGGGTGGCCACCGGTGGCGTGGAGGACGCCTACGGCGAGGACCGCGCCACCGAGGACCAGCCCATCACGCCGTGGGCCGTCTGCGTCGCCAGGTATGCATGGCTTGTGCCTTGTGATCTTCTGTTCTTGCGTCGGGACAAAATGGTTTTACATGTGTGCATGCGCCATTTGAAGAAGCTTTGCCAACGTATCAGACTTTCAGTACTGAACTAATGATTATTGATTAAGTGATTAGTGATTTCACTAGTACTAGTAGCTTTGAGCTTATCTGGGCTCAATTTGAGATATTCCTATCACACGATCTCGCATAGTCATTTCAACATATTCCTAGTTACTTCATGAATTCGTTTGAACTATGAGCAATCAACCACTAACCAGACCATGATAAGCCCAGTCCAGCTCTAAACTAAGAAAGTAAACGACCAGTCTACACATATGTGATCTGGTGTTAATTTTGTGATTGCTACTTGGTTTTTTAGCGGGCACTCTCTGCTGAGGGATCCACGGCACAACAAGGGGCTATCATTCACGGAGAAAGAGCGAGACGCCCACTACCTGCGGGGTTTGCTGCCTCCAGTCGTGCTCTCCCAAGAACTTCAGGTTTGCTCCCTTCCACTTCCCCAGCGCTCGATTCATCTGATAACATTGTCGGTAGACGTTTCTCACTGAAGCGTGCATCACCTGCAGGAGAAGAGGCTTCTGCAAAATGTGCGGCAGTTTCAGGTTCCTCTGCAACGTTACATGGCTCTGATGGACCTTCAGGTGTGCTCTGGCTTCATCTTGTTTAGAGAAAGCGTCGGAAGGGTAGAAGAAAACTAGATATCGGTTGCAGTTTACTAGGCACGGATGTCATGTTGTTCCGGTGGACGGTTGGTTTGCAGGAGAGGAATGAGAGGCTTTTCTACAAGCTCCTGATCGACAACGTTGAGGAATTGCTCCCCGTTGTGTACACGCCGACGGTGGGCGAGGCTTGCCAGAAGTACGGGTCAATCTTTAGACGACCACAGGGTCTGTACATCAGTCTTAAAGAGAAGTATGTTTCTTCCATCATTTGTATCTGTTGCTCATTTCTGTTGGTAGTTTGCCCCTTCACCTTATGTTAATTTTTACTTATTTTGAACAAACTGATGGCAGAAGTTTGAGGTGTAAATCATCTTCAATTTTCTAAAATGAGGTGCTTTTGTACCAGGGGGAGAATATTGGAGTTACTGAGGAACTGGCCAGAGAAGAGCATTCAGGTTATTGTTGTTACTGATGGTGAGCGCATTTTAGGTCTCGGGGATCTTGGTTGCCAGGTCAGTAAATTAGTCCTGACATTTGTGCTTTGATAAGGATCCTTCATGCATTTGGATTGTTTAAAGTGCTATTACTTTGCTGCTTAACATGACTTTTTTTTCCATGTTCGTTGAAAATTGCAACATATATAGGGTATGGGAATCCCTGTGGGAAAGCTTGCACTATACACAGCCCTTGGAGGTGTCCGGCCTTCTGCTGTAAGTTATTTTCATTTCAATTGTTTTCTTCAGCAATGAGCAGAATAGCAGATTGATGTAGCATTTTCCCACCATTTTGCATTCCAGTGCTTACCTATCACCATTGATGTGGGAACAAACAATGAGGATTTACTGAAGGACGAGTTCTACATTGGATTAAGACAAAAACGAGCCACTGGCCAGGTTTCATGCTTATTTCTTGGATATGCTCATTCAGTTTTCATGAATGATATGTAACAATATGGTTGTGATTTCAGTCATGAAAGTTGGTTTTTATTTCTTTAATTAGGAATATAGTGATCTTCTGGATGAATTCATGGCTGCTATTAAGCAGCACTATGGACAGAAGGTGCTAGTCCAGGTATGGAAATGTTAAAAGGAAAGAGGAAAACTTTGGTCTGTAAATGAGCTGTTCCTATGGGCAATTGTTCAATTTGTTTTATTTTACAGTTTGAAGACTTCGCAAATTACAATGCATTTACCCTTCTTGAGAAGTACCGTGCAAACAATCTTGTCTTCAATGATGATATTCAGGTAGTAGGTTCAGATCTCACTTTTTTACTCTTCATATTGGTCTCGTTACAGTTCCTAAATGAAAGCGAACTAGTGAATGTGCATTTATACTGGGTTTCACAACAATAGGAGTAAACCATGAAACTGTGGTGTAAACAGGGAACGGCTGCTGTAGTGCTTGCAGGCCTCATTGCTGCTCAGAAATTTGTCAGTGGGACTTTAGCTGATCACACATTCTTATTCTTTGGCGCAGGAGAGGTAAGCTGACCTTCCCTTTCAGTGATATGGAGGGTGCATTCTGCATTGCTCACATTTACTTTAGACTGCTGCAACATGTCTGAACTCTGAACATCCATCTATACATCGCGTATTGTATTATAAGAATATACATTGAGTATTGCTTTTACATTCCTGTCATAACTGTAGCAATGAATAATTGAAGATAGTCAGTAACAAAAAAAAACATAAATAGTTGGACTGATTATCCTATCAGTAGAGTTGGTTAGCCATAGGAATAGGACTTATCACAATTCAAAACTTCAGTTGTTCAGAAACCTTTTCTGTTTCTTGCTAGTTGAGATGCAAAAAAGTTTTTTTTTTTTTTGCTTGAATAGTGAATAATCTAAGCATGCCACCAGTAAATTAGTGATTTGACTCTTAATCACCGACGAGCAAAAATTTGTTCTATCATGTAAAACCTATAGATTGTTCCAAATAGATTACCTGTTCTTGCAGGCTGGTACAGGCATTGCTGAACTAGTGGCTCTCGAGATATCAAATCAGGTAACTCGATTGCTAGCTTCACCTAATTTGATTTTTGGTAATTTGTCTATGATGGCTCAATTAATCGTTAGCTATGATTTTTTTTCAGTCCAAAGTTCCAGTGGAAGATGCTCGCAAAAAGATCTGGCTACTTGATTCAAAGGTTAATATAATAATGATATCGCAGTGTTAACTTGCATCCTTTGGTAATTGGACCATTGAGAGTTGATTTATGCATTGCAGGGGTTGATTGTCAGTTCACGTAAAGATTCTCTTCAGCCCTTTAAGAAGCGATATGCCCATGAGCATGAACCAGTCAAAGATCTACTGGATGCTGTTAAGGTGCAAAACTTGAACCATAAGAGATGCATATTATATCAGTATACATTTTTCTTTCAGGCACCACCACACTAGACTGATTTGTATCTTTTTAGGTTATCAAACCGACTGCATTGATAGGTTCAGCTGGTGTGGGTCAAAGTTTCACAAAAAAGGTGATTGAGGCTATGAGTTCAATTAATGAGGTAACAATAAAATCATTGACCTCTTCAGATAATTGACTCATAATAAGTCACATTAATGACACATTCAAGAACTGAAAGCTTGGTTCCAATATAATGCAGAGACCAATCATCCTCGCACTATCCAATCCAACATCACAATCTGAATGTACTGCTGAACAGGCATATTCATGGAGTAAGGTGATATTCCATGTGCAACCTCACGCCATCTATGATCTATCCCATTGAGATCAACACATATATGAACTATAAACTTCTGTAAATTATGTCACAAGCATTTATGCTTTATAACTTATCAGATGATACATCATGCAGGGCCGTGCAATATTTGGGAGTGGAAGTCCATTTGATCCAGTTAAATACAATGACAAGCTTTTCGTGCCTGCACAGGTTAGGGATATTACCTTTGCGCACGACATGTGCAGTTCTCAATTATTATTATTTTTTTGATAAATCACTGGAGGGGAGAGATTCCCCACCTGAATTTTAGTTCTCAGGTTTTTGACAATTTAAACATACTCTTTACCCTTTGAATAGGCAAACAATGCATATATATTCCCAGGATTTGGCCTAGGCGTAGTGATTTCAGGAGCGATAAGGGTGAAAGATGAAATGATCCTTGCTGCTGGTAAATGCATTCTATATGAGCCCAAGAGTTTTTTTTCCCATCCACTTTACTAATGTGCTAACCACGCTATTGTTGTTTTCTTGCTTGTCTTGTTTTTGCCTTCATGGCATTGGACAGCTGAAGGTTTAGCTGACCAGGTGACCCCAGAGCATGTTGACAAAGGCCTTATTTATCCACCCTTTTCCTGCATCAGGAAGATATCAGCCAACATCGCAGCCCGCGTTGCTGCAAAAGCCTATGACCTTGGTAATATTTGTTCCTTTTGATGTGGTTCACTAGCACGCTAGCTAAAACAAGATGCTCGCATACCAACAGTTATTTCGCACTTCTGTATGCAGGATTGGCTAGCCATCTCCCTCGCCCAAAAGACTTGGTGAAGTACGCTGAGAGCTGCATGTACAGCCCCATTTACCGTTCTTATAGATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA004441

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA004441&oldid=42165"