Os11g0524300

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Revision as of 09:11, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0524300| Description = Protein of unknown function DUF1001 family protein| Version = NM_001074521.1 GI:115485690 GeneID:4350611| Length = 6...")
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Gene Name

Os11g0524300

Description

Protein of unknown function DUF1001 family protein

Version

NM_001074521.1 GI:115485690 GeneID:4350611

Length

6020 bp

Definition

Oryza sativa Japonica Group Os11g0524300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:20809695..20815714

Sequence Coding Region

20809787..20809981,20810181..20810230,20811549..20811609,20811695..20811730,20812575..20812625
,20813230..20813322,20814994..20815098,20815231..20815323,20815421..20815564

Expression

GEO Profiles:Os11g0524300

Genome Context

<gbrowseImage1> name=NC_008404:20809695..20815714 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:20809695..20815714 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggctccggcgaggacaccggcgcgggcgtcgcgggaggagggggaggcggaggcgccggtggggtggtgcggggcgcggtgctgaaggcgctcgtggtcgtcggcggcgtgctgctgctccggcggctgcgccgctccaccacccggtgggaccacgcccgcgccgtcgtggacgcgctctccggtgagaagttctcgagggagcaggcgaggaaggatcctgataactactttaatttgaggatgcttacatgccctgcaacagagatggtggatggttctagagtgctttactttgagcaagcattttggagaagtccagaaaaacctttccgacaaagattctacatggtaaagccatgcccaaaggatatgaaatgtgatgttgagttgagttcatatgcaattagagatgttgaagagtacaagaatttctgtgaccgtccaaaggatcagaggccacaaccagaagaagtcattgcggacattgcagagcacctgactaccatacacttgtcgcggtgtgagcgtggaaagcgctgcttgtacaaaggatcaacccctcctgaaggctttcccaacagctggagcggtgcgacatattgtacatcggatttgtccattcacaagaatggtgaggtgcatatctgggacaagggttttgacgatgatgggaatcaggtttggggaaccaaagctggcccttacgagttcaagcctgcccccaagtcgaattacgacgacatgttctcgccgttgaatttttctgctccattgacgctggagaagaagattgagagctcgttcgcaatcgatgatcagtag</cdnaseq>

Protein Sequence

<aaseq>MGSGEDTGAGVAGGGGGGGAGGVVRGAVLKALVVVGGVLLLRRL RRSTTRWDHARAVVDALSGEKFSREQARKDPDNYFNLRMLTCPATEMVDGSRVLYFEQ AFWRSPEKPFRQRFYMVKPCPKDMKCDVELSSYAIRDVEEYKNFCDRPKDQRPQPEEV IADIAEHLTTIHLSRCERGKRCLYKGSTPPEGFPNSWSGATYCTSDLSIHKNGEVHIW DKGFDDDGNQVWGTKAGPYEFKPAPKSNYDDMFSPLNFSAPLTLEKKIESSFAIDDQ</aaseq>

Gene Sequence

<dnaseqindica>93..287#487..536#1855..1915#2001..2036#2881..2931#3536..3628#5300..5404#5537..5629#5727..5870#atttccctccctctccccctcttccgccccaacctccaacctcacctcgtcgtcgccacggcctccctcgcgagttcgccgtggaacacccgatgggctccggcgaggacaccggcgcgggcgtcgcgggaggagggggaggcggaggcgccggtggggtggtgcggggcgcggtgctgaaggcgctcgtggtcgtcggcggcgtgctgctgctccggcggctgcgccgctccaccacccggtgggaccacgcccgcgccgtcgtggacgcgctctccggtgagaaggtgtggctcactcccctcgtcccgccccccccaccggaggaattagttcggatttgggagcatttagatgggggtgtagggcggggcagcgctggggaatttcgtcgtgaaatttgtttcccaattttgaactatgcgtagtgttggggggctcgaatggtgttattgtagtattttttttgacgtttttcttgtgcagttctcgagggagcaggcgaggaaggatcctgataactactttaatttgaggtgaggaattgtgcgagcattaccctttttttttgtatgttattagcatttgtgctgtcgatttggttgggaatccttgactccatacttgtgtcacacttgctaatggtaagaactagtcttacgttgggttgtagtgttttggggctgttggtttgttaggaatttggtgaaaatagcttatttcccccctgcttagcaagctccattgttcttgcatcggtacaatgcacatcgctgatatgcgattgtggtgttgaggagtgaatattgtaggcttttgattttatctttggtgatgatgattgcctgtgtttttgcgagtagatgagcaatactaaaatgactggccatgttagagcttggatatcataatttttctgatcactgttaagttttcgaattggattatttcttcattgggttccacaataaatgcgcattgggatcatctgctagtacgagctcagtataaaacagttgattgagtggcatgcttatgcaaagggatgatttaacttttgtactttctgtcttctgtccccataaataaaattgcgattaaggcactatgtttagtcttctagaaacaaatggcagttgcaactgtgatgctgtacaaataattgaccttattataagcaccatggacggttcatttgctttggcagaactacgcaaacatatcaatgaaaatttacttgatttcctcctacagtatcatctggagcaaatttattattaaagatttttatttcattaaaccctatatttctgatcctttgggaataaatgaacaggcaatgctttttttttttgtgaatttcaaggacctacaactcagtgatgtagtcaatttttattttacactatatactctgaatacttctgctcttactgatttaccttggtccttactgttggtccttggaaccgtaatttccaggaggatacccgtattattgtgacactttggttatcaatacatggctgcctagatatttcgtatggaaatgcagcttctcttagttgatagtgattcaccattagtttgaaaaaaatctagataccagaatataacatactagaggcgataaaacttcttttatttttgaatgtaaattttgtgcgcctatgatacagactatttcatttacacattcaggattatttgtgctttctttccttatggaactcttttgagttatcaacttgtttctttttgggcataaggccaaacattttgcagtgtacatgctaatctgcttttgatcagacatatatctggtgttataacctgatcttccttgcatcgtaggatgcttacatgccctgcaacagagatggtggatggttctagagtgctttactttgagcaagtatgcccactattttcatgtctttatttcacatttcacagtctagtccctttctaagacttggatatctttatgttccttgcaggcattttggagaagtccagaaaaacctttccgacaagtatggtaacttctaatctgtagaggtcattcttgcaagcctctgtttttttaattcaacatgtgaatgcatttactattatattatgttcaacatttttaaagtgcttctctacaaattgaagtgcatcatgtgaaaacatgtatggttaacaagcttacaagatctgatggtgcacatccacaaacatcatattttgtgccatctcatgttaattaattgtctgctttcctattctttgatcaaatggtattcccccatttcactgatttggtagatgcttagagcagccatatgaccatttgtccacttcatgcttatgttaaatccaactgtacaaacattttcatgtgtttatttcttttgtctggagtctggacactttaggctatgctgttattggagatagtgagaaaaatgtcacattactctgcaaaaaggatgcttctcataagatgttcaattgatttgacataacaatatgtgaatactagaactgaacatttcatttgcagcaatgctcttttatttccaataaaaaaaactttaggggttggtcatggcagtatctgttgatacttaatattgacaagcaaaaataagaaaagaatttctaacccacaccatgggatctagtcaagagatgctatataatcaactagacaacaaggctgttttgtgacagatattggtactttgcatgtccttttgtggcatattatttatatgatttcacaacgaactttcatttaagatcttgtcttgttcttctatgtttctatcccatgtacctttctgctttagtatttatatgcaaatgctaataaacttatggtccatgcagagattctacatggtaaagccatgcccaaaggatatgaaatgtgatgttgaggtgatcttacctgtgcctttatctaagatctgattgcatatatgcctttacgctgatattgaagttttacatggagtagtactctgcattgatattccatagagttaggctgtgttcttccccccattttcccaacccacctctctcgttttccgcgcacacagttttcaaactgctaaacggtgtgatttatacaaaaactttctatataaaaattgttaaaaaaatcatattaatccattttttcaaaaaaaattagttaatacttaattaatcatgcaataaaatgaacttcgtttgcatgccagggaggaggggttcccaaccccctcctccgaacacagccttagtagagtcaattggttcataatcctccagttttgaatttaaactgctgtattaccaaagcgaggtcataagaagaaatgatatatcatattaaatcgtaaaagaggaatctgattcatgaatgttagtgtggcattgcatgatctattttctaccttttcagtttttcatataaaatgctgaaaacatatgtaactttccttaccttgtccattttaaagatttttattaacactagataattttcaatggatagttgagttcatatgcaattagagatgttgaagagtacaagaatttctgtgaccgtccaaaggatcagaggccacaaccagaagaagtcattgcggtatgtcctgtcaaaatcatatttttcagaatgcaaacctgagagctttccccctttaatttgtaattttggttgaggtattttttatcatgtttccatggttccatgagatgcgttcccattatcagtaattaccttgctgtttataagagccaagtaaaagtactttatactcattggcacccatggaatttcctttgcatctatttatcagaccttcaaatgttcccatggactgtaaatttgtttctactgtgtgaccaccagattctgttcatttttctatccatctaactattttgtagtgttaagagtgatatgcaggtgttgctccattgtctaggttaagaaaatcctttataggaatgtgctgaggaattcaaattaataataccgaatttagtttctaatgaactttatagtttccttggttattacaatttgaagaatggtttacccaaacatacatgtatgcaatctgtcataactaaacattatcactatatcttcgcaattgtatattgaaatgcaaatacagtaagttacgagatgaaattcgagtggaagtcactgtgacaacaatgtagtagtcaaccagaagaggggataggttttcaggggttatatgcttaactttgatagtttgattactggctaaactcattttacttagtaactgattgatgactgtcattagcttgactttttgatggtttaccttgtaatgaatgaagcaaaaactgttttcagtttctgtactcatcttggtctaggtagtatgcggagttgcttgcaaataaaatcaggtgaaatagccacttgcatgggctatataggaaatctgcattatcatttccaccaatttaatgtcaaaatgatatgggggagtctaatgggctgcagtttttatagatatgtacagtatactggctgactatcatatgtttgactgtaccaattcatgtacatcctttttatcatttaaagatcatggaatgggacctaaatttgtgttgttatgtgctacacttactgcactaatagggcaagacttagttcccacatggataaagatgctggctcccttattacatggcataaaatgtgatgcacccaaagctatgcactatatttgtaaaggctgtagatcttagtgtgtccccaatggatatccacatggaatcatgtgttaacaatagcttgcttcatacagttcagtcctcgctagaaaaccttccattactcttaaattgtagccatgatgcagcagtctcatctccagatcgcccttaaatgatttgttgaagcttttttggacagtttgaaattaaaatagaactgaattgtgattttgtaagttatgtttctttcttattttaaacagtgttcgaacctttattgagtaaatggctatgctctctgggctacaatgcttgtgcagaaatagtatcttgtctgaaacatcttgtcaatctatgatgtacgtgaagttgtgaacccctttgatgagccataaaaaggaaataaacttatcatcgtataagtcttagcttctgttcctattgtgttggtggtagaagaaaaatagacaagtttttttttttcatttttttacccaagaaagtagttcgcactactcttctgatgctcaagttcattgttggttcgcaggacattgcagagcacctgactaccatacacttgtcgcggtgtgagcgtggaaagcgctgcttgtacaaaggatcaacccctcctgaaggctttcccaacagctgggttagtccttttgatgacaacattttgtcttctcctgagtcctgacaaacaataacactcctggataatttcttgttctctattgaacgtttcgaggcaaatcccgtgatctcaacatcaatgttttgacagagcggtgcgacatattgtacatcggatttgtccattcacaagaatggtgaggtgcatatctgggacaagggttttgacgatgatgggaatcaggtatcattttgtatgttctctcatgttgtcatcccttgtaacttgcagtccttgtgaattttattccttctaacaatgtagtatgaatttatctcaggtttggggaaccaaagctggcccttacgagttcaagcctgcccccaagtcgaattacgacgacatgttctcgccgttgaatttttctgctccattgacgctggagaagaagattgagagctcgttcgcaatcgatgatcagtagtatattagtatgtacatacagttcatgtacctctctctctttttttttaatttaagaaaactaagcagaaaaaactgccttcgtttagtatatagccccgtgtactgaattttgttgctaagaaatgcaataaaaagtagcgttgcatgt</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0524300, RefSeq:Os11g0524300