BGIOSGA004471

From RiceWiki
Revision as of 11:06, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA004471| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA004471, complete gene.| tag = P0435B0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA004471

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA004471, complete gene.

LocusTag

P0435B05.25

Ensembl Transcript ID

BGIOSGA004471-TA

Ensembl Protein ID

BGIOSGA004471-PA

Length

6494

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:34751268..34757761

Sequence Coding Region

34751268..34751609,34752084..34752158,34752261..34752411,34752968..34753036,34753116..34753288
,34753726..34753863,34753999..34754124,34754203..34754301,34755428..34755551
,34755719..34755782,34756052..34756106,34756205..34756329,34756482..34756555
,34756690..34756739,34756976..34757062,34757151..34757201,34757279..34757362
,34757654..34757761

Genome Context

<gbrowseImage1> name=IndicaChromosome01:34751268..34757761 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:34751268..34757761 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCACGGGCATGCTGCTCCGCGGCCTCCGCTCGGCGGCGAGCCGGACGAGCCCTGTCTTCCCGACCTCCGCCTCGTCCCCGGCGCCCTACGTCTCGCCGCTCCTCCGCCGCCTCTACTCGGCCGCCGCCGCGTCGGCAGCCGCCTCCCCGGCCCTGGGGCCCGGAGGCGCCCTCGACCCGTCCCGCATCCGCAACGTGGCGGTGATAGCCCACGTCGACCACGGGAAGACGACGCTGATGGACCGGCTCCTGCGGCAGTGCGGCGCCGACATCCCACACGAGCGCGCCATGGACTCCATCAGCCTCGAGCGCGAGCGCGGCATCACCATTGCCTCCAAGGTCACTTCTGTCTCTTGGAAGGAGAACGAACTCAACATGGTTGATACACCTGGTCACGCTGATTTTGGTGGCGAAGTCGAGAGAGTTGTTGGAATGGTTGAAGGGGCGGTCTTGGTTGTTGATGCTGGGGAGGGACCTTTAGCACAGACCAAGTTTGTACTTTCAAAGGCTTTGAAGTATGGCTTGCGCCCAATTCTCCTTCTCAACAAGGTTGACAGGCCATCAGTTTCGGAAGAGACCTGCAATGAAGTAGAGAGCTTGGTGTTTGATCTATTTGCAAATCTTGGTGCTACAGAAGAACAGTTAGACTTCCCAGTTCTTTATGCATCGGCTAAAGAAGGCTGGGCTTCTCTAGAATTCACCAAGAGCCCTCCTGATAATGCGAAAAATATGTCTGCATTGCTTGATTCCATTTTACAGCATGTGCCTTCTCCAAAAGCTGACCTTGAGGCTCCATTCCAAATGTTGGTTTCCATGATGGAACGCGATTTTTATCTAGGACGAATACTGACTGGACGAGTAAGATCTGGGGTTGTCCGTGTTGGTGACAAAGTGCATGGTCTTCGTAGCACAGATGATGGTGTTCAGAAGATCGAAGATGGAAAGGTTGTCAAGCTCATGAAAAAGAAAGGAACAAGTATGGTAATAGTAGAGGCTGCAGGAGCTGGCGACATAATTTCAATGGCTGGATTGGCTGCTCCAGCAATTGGGCATACTGTGTCAAATTCAGATGTTTTGACTGCCCTTCCTACAATTGAGTTGGACCCTCCCACAATATCTATGACTTTTGGTGTGAATGATTCACCACTGGCTGGTCGCGATGGCACTCATCTAACTGGAGCGAAAATAGGCAACCGCCTAATGGCAGAAGCAGAAACGAACCTGGCAATTAATGTTCTTCCTGGACCATTATCAGAATCTTATGAAGTTCAAGGAAGGGGAGAACTTCAGTTAGGAATCTTGATTGAGAATATGCGCCGCGAAGGATTTGAGCTTTCAGTTTCACCCCCAAAAGTGATGTATAAAACAGACCGTGGAGAAAGGTTAGAGCCTATTGAAGAAGTAACTGTTGAGGTAGACGAGGAGCATGTTGGATTTGTCATGGAAACCCTGACACACAGGAAGGGTGAAGTAATGGACATGGGCCCTGTTCCAGGGACAACTGGGAGAACTCGGATCTTTTTGACCTGCCCATCTAGGGGTTTGGTGGGATTCAAAGGAATATTCAGCAGCTTTACACGTGGAACTGGGTTTATGCATCGCGCTTTCCAGGCATATGCTAAATACAGAGGTCAGCTGGGCAATGTTAGAAAAGGAGTTCTGGTATCTGTCGGCAAGGGACTTATCACTTCACATGCACTTATGAGTTTAGAAGCTCGTGGTATTCTGTTTGTTTCTCCTGGGATGGAGGCGTACGAAGGCATGATTGTTGGAGAGCACTCACGTGACAGTGATCTTGATATCAATCCTGTGAGAACTAAAGAACTTACAAACATTCGAGCTCCAGGAAAGGATGAAAATGTCAGGCTTTCTCCACCACGATTGATGAGTTTGGAAGAGGCAATTGGATATGTTGCTGCAGATGAGCTTATTGAGGCAAGTTTTCTGTATTTGCTATTGATGATTCTACTTGTGTACTTGTGTGAGGACTAA</cdnaseq>

Protein Sequence

<aaseq>MATGMLLRGLRSAASRTSPVFPTSASSPAPYVSPLLRRLYSAAAASAAASPALGPGGALDPSRIRNVAVIAHVDHGKTTLMDRLLRQCGADIPHERAMDSISLERERGITIASKVTSVSWKENELNMVDTPGHADFGGEVERVVGMVEGAVLVVDAGEGPLAQTKFVLSKALKYGLRPILLLNKVDRPSVSEETCNEVESLVFDLFANLGATEEQLDFPVLYASAKEGWASLEFTKSPPDNAKNMSALLDSILQHVPSPKADLEAPFQMLVSMMERDFYLGRILTGRVRSGVVRVGDKVHGLRSTDDGVQKIEDGKVVKLMKKKGTSMVIVEAAGAGDIISMAGLAAPAIGHTVSNSDVLTALPTIELDPPTISMTFGVNDSPLAGRDGTHLTGAKIGNRLMAEAETNLAINVLPGPLSESYEVQGRGELQLGILIENMRREGFELSVSPPKVMYKTDRGERLEPIEEVTVEVDEEHVGFVMETLTHRKGEVMDMGPVPGTTGRTRIFLTCPSRGLVGFKGIFSSFTRGTGFMHRAFQAYAKYRGQLGNVRKGVLVSVGKGLITSHALMSLEARGILFVSPGMEAYEGMIVGEHSRDSDLDINPVRTKELTNIRAPGKDENVRLSPPRLMSLEEAIGYVAADELIEASFLYLLLMILLVYLCED</aaseq>

Gene Sequence

<dnaseqindica>1..342#817..891#994..1144#1701..1769#1849..2021#2459..2596#2732..2857#2936..3034#4161..4284#4452..4515#4785..4839#4938..5062#5215..5288#5423..5472#5709..5795#5884..5934#6012..6095#6387..6494#ATGGCCACGGGCATGCTGCTCCGCGGCCTCCGCTCGGCGGCGAGCCGGACGAGCCCTGTCTTCCCGACCTCCGCCTCGTCCCCGGCGCCCTACGTCTCGCCGCTCCTCCGCCGCCTCTACTCGGCCGCCGCCGCGTCGGCAGCCGCCTCCCCGGCCCTGGGGCCCGGAGGCGCCCTCGACCCGTCCCGCATCCGCAACGTGGCGGTGATAGCCCACGTCGACCACGGGAAGACGACGCTGATGGACCGGCTCCTGCGGCAGTGCGGCGCCGACATCCCACACGAGCGCGCCATGGACTCCATCAGCCTCGAGCGCGAGCGCGGCATCACCATTGCCTCCAAGGTAACCCACCTTCCACCACTCGCGCGCGCCGCGTGGTTAGTGAGGGCACACGAGAGGTTAAATGTCCATTCCGTCGAACATACTGCGTGCATCACGTGAGGGATTAGAATGTTGGCTTGGGGAAGGAAGTGAGATCTGCTTCAAAGGCCATTCTCAAACTTGCGCTACTGTTTTCCCTGTTATACATCGCTGAGCACCTTGGCAGATTTCAGTGCGTAAGTAAATTTCTGGGAGGATTTATGTCACTTATGGTTCAACTGCTCTGCTCATTCTGTACTCCGTAAAGCCTGCACATCTATTGTAGTTCAATAAATCACTCCCGAAATCTGATCTGCTGAGATAATCATTATCTCATCCTTCTGATTTTTTTTTTTTGTTGAAACTTCTTCATTGATGGTCCAATAGCTGCATAGCATTCAGTATGGTAACTTTTTATGTGGCATCTCACTTTTTTCGTCTCGGCTATTTGTGTAGGTCACTTCTGTCTCTTGGAAGGAGAACGAACTCAACATGGTTGATACACCTGGTCACGCTGATTTTGGTGGCGAAGTACACACTCAGCACTCTTTTATAATTTCATACAGTTAAGAACAAGAAGAAATGATGATTTTTCTATGGTATCTGACATGATCCTCACCAATTATGTGACAGGTCGAGAGAGTTGTTGGAATGGTTGAAGGGGCGGTCTTGGTTGTTGATGCTGGGGAGGGACCTTTAGCACAGACCAAGTTTGTACTTTCAAAGGCTTTGAAGTATGGCTTGCGCCCAATTCTCCTTCTCAACAAGGTTGACAGGCCATCAGGTTTGCTTATTCTCAGATGCTCTGCTCACTATGGCAGTATTTTGTGAGCAATGGATGGCATGTACATAACAAAGTGATTCAATTTTCTTAGATATGAATCAAGCTACGATCTTAAGCTGAGCAAGTATGAAGTTTTGATGTGTAATTTAGTTTAAGCAGATAAACAGAAACATATACTTTGGGGGTAAATACACAATAATTTTTATCCAAAATGACACAATATTCCATTTCCCGTCACAAAATTAGGCTACCTTTTGTTTTCTATGTTTACAGAAAAAGAGAAATATCCAGTCATGTAATTTTTAGTTAGAAGGCCTTTCCTTTTGAGTAGCCTGTTATTAGCATTGAATGTTTTTTAGCGTTAGCAATAATTTTGTTTGAAAGATGAGCTACTGCGATATATTCACTTCCCACAAAGTAAAAATGGCCAACTGCAGTGGGATACACCAGCTCAGAAATAGATAAAGCATTATATTCATTATTTTTGGCATATATATATATCCCTAGTATATTATGTTTGCTATAGCTCTTTAACTAACCAATTATACTCCAACAGTTTCGGAAGAGACCTGCAATGAAGTAGAGAGCTTGGTGTTTGATCTATTTGCAAATCTTGGTGCTACAGGTGCATTTCTAGTACTTCAATTTGGTGCCTTGGAAGTTTTTTCATAAATATGTGACACTATTTTATTCGGGTTTTGCAGAAGAACAGTTAGACTTCCCAGTTCTTTATGCATCGGCTAAAGAAGGCTGGGCTTCTCTAGAATTCACCAAGAGCCCTCCTGATAATGCGAAAAATATGTCTGCATTGCTTGATTCCATTTTACAGCATGTGCCTTCTCCAAAAGCTGACCTTGAGGCTCCATTCCAAATGTTGGTTAGTGTATTGCACAGCATCTGAAATGGATATTTTATTTAGACAAGGGAAAACTTGCTATTTCTTTTGTAATTCTCCATCCATCTCTAATGACATGTTTATTAGAATGAGTGAACGACTAAGTATTATGGCGATTTGTTTATTTGTAATAGAGTTCCACTTGATTTAGCAACCAAAACAAAATAATGCCTTCGTTTTTGGCCAAGTTTTCTCCACTCTTAGTCAATAGCTATTTGTAAGATTCCACCTCCTTTTCAGAATTTAAGACTTCACACACTTCTTCTTGTTCCGAAATGTGTGTTATTTAACTTTTGCAGGCAAGTTTTCTCTAATTCCCCACCCTAGAATTTATCTTAAATTTACCTCTTCTGAAGATATTTATGTAAGGTTGTACTGGTAATTCTTAAGCGGAGCCAGTAATTCATAGTCTTCTACAGGTTTCCATGATGGAACGCGATTTTTATCTAGGACGAATACTGACTGGACGAGTAAGATCTGGGGTTGTCCGTGTTGGTGACAAAGTGCATGGTCTTCGTAGCACAGATGATGGTGTTCAGAAGATCGAAGATGGAAAGGTTTAACTGAATTTCTTGCACTTCTTCTTGGCAATGCTTAAACGCTGAAGACACTTTTTTCTCATTCAATATGTTTAAATTATTGTATTCATTAAATGCCTTAAGGACCTTTGCAAACTACTGAAACAAATTCAGGTTGTCAAGCTCATGAAAAAGAAAGGAACAAGTATGGTAATAGTAGAGGCTGCAGGAGCTGGCGACATAATTTCAATGGCTGGATTGGCTGCTCCAGCAATTGGGCATACTGTGTCAAATTCAGATGTAGGTTGCTAATTCGTGCTGCTGAACGTGTTTCTATTGTCAGATATTCCTTGTACTAATAATGGTTGTACAATATAGGTTTTGACTGCCCTTCCTACAATTGAGTTGGACCCTCCCACAATATCTATGACTTTTGGTGTGAATGATTCACCACTGGCTGGTCGCGATGGCACTCATGTAAGTAGCAAACAATTAACCTAGACATCAAAGTGTTCCTATTTATTCCTCATATTGTTTTCATTGTCCTTTTTGCTTTTGATGAAAATTCATGCATATTTGTTTTGTTTTCCTATACATCAAAGTGTTCTTATTTTGCTTTTCATGTTCCTATTTTGTTTTTTTGCTTAAAGTTAGGTTATTATTTTAAGATAGATTTCAGATTCCTGTAGAAGCTGCTAATATGTTAATGGAACCATGATAATCAGATGGTGTTATAACTTCCACAGCACTATGTTGCTCTGGATTTGGGGATGTCATATGCAGGATTCTAAAATTTAAGGAACTAGTTAATTCATATTGGATCTGAAAATTTGTTGCAGACTGAAATATATTAGTTATTTTACCTTTTCCTTTTTAAGAAAAAGAGAATATAACATTTGCTCACTGCAATATAACTTGTATCACTAGATCTTGTTCATAGTCACTACTTGAAGTCTTGAACTACAAATAATGGGTAGATATCAAATGTTGACTTGCTGAGCATGATACTACTAGATCATAATTTTCCTGTCAAAATAATCAGAAGGCAAACATACCATACATTTTTAATCATCTGAATTCAGTTACTAGCGCATAGGTTTTCCTAAATCTATCGGTGGAGCTAGTCCTCTGAATGAAGTTTTAAATTGGTAGGTGAGAGTAAGGACTAAGAAGCTAACACCATTAGTCTTGGAGGTCTAAATCCAAGGTATGGTACTAGCCTCCTAGGTGTTTTTGCAATGCTATCCAGGCTGGTTTTTGGGCAGTATGTACATACTTTTATTTAATGTGAAGTTTTATGTCATTTGTTTCTGAGGAATGGTGCGGTCAAATTTAAATTAGGATATAACGATGCAAAGTATGGAAGCCTTGGTGCCTCTAAGTAAAACACACCAGCGTTCGATCTCCTTTGTTTGAATGACATAGATAGATCCAACCACAGCTATTCTAAATCAACTTCATAGGTTGCCTATGCTGACTACACATAGTCTGGAAAGAGCCTAATTACCAATCTGTATGGTGCTATAGTAATATAAATTTGTATTCAATAAATCAAGCAATAATAGCTGCCCTCTTTTTCTGAGGTCCATCTAAAATTTTGTAGCTAACTGGAGCGAAAATAGGCAACCGCCTAATGGCAGAAGCAGAAACGAACCTGGCAATTAATGTTCTTCCTGGACCATTATCAGAATCTTATGAAGTTCAAGGAAGGGGAGAACTTCAGTTAGGTAAGTATATGTACCACTGATGAAATCCCTTCTTTTTCTGATATATACTATTTAACTGCTTTTTTTTTCTTGATTTATTTGAGAGCACTTCATACGTCAACCTCGTGTACAATATAATGAAAAGTTTCCTGCCAACTATAGCATTTGATGATCTGCGCAACTTCCAGGAATCTTGATTGAGAATATGCGCCGCGAAGGATTTGAGCTTTCAGTTTCACCCCCAAAAGTGATGTGAGCACCAATATTCCACATATTATACTCTTTGTATGCTTATGTTTTCACTTCAGCCTGAAGTTCTTTAGTTCAATTTTCTTTCCAACAGTATTAGAGAAGATAACCGTTTGTAGCTAGATATTTTGTTCTATTACTTTGTTTCACCCTGAAGTAGTTATATTCCCTGTTCTGTGGAAATACACTTTCCACTGATATCGAACTCTGTATCTGAGCAATTTGGCAGCACTGTTCCCACTATTAACTAATTTATGTATTAATTGAAATAGGTATAAAACAGACCGTGGAGAAAGGTTAGAGCCTATTGAAGAAGTAACTGTTGAGGTAGAAATATGGAACCTTGTTTGAACTTCTTTGTTTTTAGTTGTTTACTTTGTTCTAAACTTGTATTCATAAACTGTTAATGTTTGAACATATTGTAGGTAGACGAGGAGCATGTTGGATTTGTCATGGAAACCCTGACACACAGGAAGGGTGAAGTAATGGACATGGGCCCTGTTCCAGGGACAACTGGGAGAACTCGGATCTTTTTGACCTGCCCATCTAGGTGATTAGTGCATATAATTACCAGCTGCATGATGTGTCACCTTCAAAAGCATATTATAGTTGATGCCAATTTTGGACTCAATTGTCTTTTGCCATGTATTTCAGTCTGGTTCTTAATTTTTTATGATACGAAATGATGCATTATGTATGCAGGGGTTTGGTGGGATTCAAAGGAATATTCAGCAGCTTTACACGTGGAACTGGGTTTATGCATCGCGCTTTCCAGGGTATGCTATTTCTTATTAAGTCCTAGATGATTTCCTTAACTCGCCTATGCATTTTTTTGAAGTAAACCACGCCATTGATGCCACCAACTAGATTTTATTGAGAGTATTTGACCTTGGTTTCTCTATGATTGCAGCATATGCTAAATACAGAGGTCAGCTGGGCAATGTTAGAAAAGGAGTTCTGGTAATGCCAATTCCTTCAGTTTCATAATTTCTTCTGTTTACTCTTATCTGTCTTCATACCAAACAAGTTTTACATTATTTTGCAATAATAGACAGCAATGAATTTTTAAACCAAGAATTAAGCAAATGAAATAAAAGAAGGAATATGTCATTAAATGTAAGCAGGATTTGATGAACTGCACCTTATTCTGCTCAACTCAACATGACAAATGTAAGTGCTCTTATGTGTATATGTAGGTATCTGTCGGCAAGGGACTTATCACTTCACATGCACTTATGAGTTTAGAAGCTCGTGGTATTCTGTTTGTTTCTCCTGGGATGGAGGTATCGACATTTATTCATTTTGTTACTATGATCTACCATCTAAGAGTAGGGGGTTTCCTTATTCCTCTTTCTTTCTCCTTTCTTTAAGGCGTACGAAGGCATGATTGTTGGAGAGCACTCACGTGACAGTGATCTTGATGTAAGTTGATTATATGCTTATCAATGAATTAGGTTTCTCTTCTAATACACAAACTAAATAACTCTTCTGTTGTTCAGATCAATCCTGTGAGAACTAAAGAACTTACAAACATTCGAGCTCCAGGAAAGGATGAAAATGTCAGGCTTTCTCCACCACGATTGGTATGTTGTGTTTTAACTTTTACCAAGACATCAGCATTCAGGAGATATCACTTTATCACCCTACAGACTAAATGGTGCTGCTTTAAACACTAGTTAACAACTTAATACCAACGGAAGCCTTGCAAGCTTTATAATATTCGCGTCACACTCTCCCTTGGGTTTTGGGAACTGAGGAGACCATAAATCTAGATTATGTGCATTCTTTGCTGAAAAATGTCATTTGCTTCCTTCCGTTGGCTTCCTCGGAAATGATTGTTACATAATCTTAACTAAAGGCACTGAATCATGCAGATGAGTTTGGAAGAGGCAATTGGATATGTTGCTGCAGATGAGCTTATTGAGGCAAGTTTTCTGTATTTGCTATTGATGATTCTACTTGTGTACTTGTGTGAGGACTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA004471