BGIOSGA004483

From RiceWiki
Revision as of 11:07, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA004483| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA004483, complete gene.| tag = OJ1414_...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA004483

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA004483, complete gene.

LocusTag

OJ1414_E05.9

Ensembl Transcript ID

BGIOSGA004483-TA

Ensembl Protein ID

BGIOSGA004483-PA

Length

2307

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:34982508..34984814

Sequence Coding Region

34982508..34982698,34982809..34983024,34983133..34983288,34983391..34983448,34983563..34983880
,34983971..34984210,34984290..34984388,34984474..34984506,34984617..34984814

Genome Context

<gbrowseImage1> name=IndicaChromosome01:34982508..34984814 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:34982508..34984814 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCACGTTCTTCTCGTATGAATCTGTGGCCGCATTGCTTCCCGTGTTTCGACGATGGCGACAGATCAGGCAACAGGTTCAGTACTGTATGCAACTTCCCCGATGATCTCCTCCCGTCGCTCGGTGCTACCGCTCACCAGCCTCCCAAGCTCAGGAAATACCTCGTCTCGCCTTATGACCCGCGTTACAAGGTCTGGGAAACATTTCTGATCATCCTGGTGGTGTACTCGGCGTGGATCTGCCCGCTGGAGTTCGCATTCCTGAGGTACCTGCCCAGCGCGCCTTTTGTCGTGGACGATGTCGTCAACGGGTTTTTCGCCGTCGACATCATGCTCACTTTCTTCGTCCCGTTCGTGGACAAGAAGTCCTACCTCCTCGTTAACGATCCGAAGAAAATAGCAGTCAGGTACCTGTCGTCTTGGTTCGTCTTCGATGTATGCTCGACTGTTCCATTCCACTCCATCAGCCTGCTGTTCAACGAGCACGGGCATGACCTTGGCTTCAAGTTTCTCAATGTTCTCAGGCTCTGGCGGTTGCGTCGAGTCAGTTCGATGTTTGCGAGGCTTGAGAAGGACATCCGGTTCAACTACGCGGTGATACGCTGCACGAAGCTCATCTCGGTCACCCTCTTCGCGATACACTGCGCCGGGTGCATCAACTACCTTATCGCCGACAGGTACCCGGACCCGAGGAGGACATGGATCGGCGCCGTGATGCCCAACTTCAGGGAGGACGGGCTGTGGATCCGGTACGTGACGGCCATGTACTGGTCCATCACGACGCTGACCACCACGGGCTACGGCGACCTGCACGCCGAGAACGCCAGGGAGATGCTGTTCGGCATCTGCTACATGCTCTTCAACCTCTGGCTCACCGCCTACCTCATCGGCAACATGACCAACCTCGTCGTCCACAGCACCAGCCGCACCCGAGACTTTAGGGATGTGGTTCAGGCCGCCTCAGAATTCGCGGCGAGGAACCAGCTGCCGCAGCAAATAGAGGAGCAGATGCTGAACCACATATGCCTCCGGTACAAGACCGATGGCCTCAAGCAGCAGGAGACGCTAGACGTCCTCCCGAAGGCGATGCGATCCAGCATTTCTCACTACCTCTTCTTCCGGGTTGTTCAAGGAGCCTACCTGTTCAAGGGAGTCTCCTCAAGGTTCATCCAGCAGTTGGTAACAGAGATGCAAGCAGAGTACTTCGCCCCAAAGGAAGACATCATACTGCAGAATGACAGCCCATCGGACTTGTATCTTCTTGTATCCGGAGCAGTAGACATTCTGGTATTCCTAGATGGAACAGAACAGGTTTACGGGAGAGCAGCTGAGGGAGAACTGCTAGGGGAGATAGGTGTACTGTGCAACAAGCCACAGTCGTTCACTTTCCGGACGACAAAACTATCTCAGATTCTGAGGATCAGTAGGACCAAGCTGTTGGGTATCATCCAGGAGAACAGAGAAGACGGCGACATCATCAGAAGCAACCTTCAGCAAGTGAACGTATAA</cdnaseq>

Protein Sequence

<aaseq>MPRSSRMNLWPHCFPCFDDGDRSGNRFSTVCNFPDDLLPSLGATAHQPPKLRKYLVSPYDPRYKVWETFLIILVVYSAWICPLEFAFLRYLPSAPFVVDDVVNGFFAVDIMLTFFVPFVDKKSYLLVNDPKKIAVRYLSSWFVFDVCSTVPFHSISLLFNEHGHDLGFKFLNVLRLWRLRRVSSMFARLEKDIRFNYAVIRCTKLISVTLFAIHCAGCINYLIADRYPDPRRTWIGAVMPNFREDGLWIRYVTAMYWSITTLTTTGYGDLHAENAREMLFGICYMLFNLWLTAYLIGNMTNLVVHSTSRTRDFRDVVQAASEFAARNQLPQQIEEQMLNHICLRYKTDGLKQQETLDVLPKAMRSSISHYLFFRVVQGAYLFKGVSSRFIQQLVTEMQAEYFAPKEDIILQNDSPSDLYLLVSGAVDILVFLDGTEQVYGRAAEGELLGEIGVLCNKPQSFTFRTTKLSQILRISRTKLLGIIQENREDGDIIRSNLQQVNV</aaseq>

Gene Sequence

<dnaseqindica>1..191#302..517#626..781#884..941#1056..1373#1464..1703#1783..1881#1967..1999#2110..2307#ATGCCACGTTCTTCTCGTATGAATCTGTGGCCGCATTGCTTCCCGTGTTTCGACGATGGCGACAGATCAGGCAACAGGTTCAGTACTGTATGCAACTTCCCCGATGATCTCCTCCCGTCGCTCGGTGCTACCGCTCACCAGCCTCCCAAGCTCAGGAAATACCTCGTCTCGCCTTATGACCCGCGTTACAAGTACGCGTGCCTCTGCTTCCGTATATGCCTCCAAGACTGTTGTTGTTCATGGATATCGATCGATCAAGAACTGAAATGTACGTTTTGATGCTCCTTGTTAATTTTTACAGGGTCTGGGAAACATTTCTGATCATCCTGGTGGTGTACTCGGCGTGGATCTGCCCGCTGGAGTTCGCATTCCTGAGGTACCTGCCCAGCGCGCCTTTTGTCGTGGACGATGTCGTCAACGGGTTTTTCGCCGTCGACATCATGCTCACTTTCTTCGTCCCGTTCGTGGACAAGAAGTCCTACCTCCTCGTTAACGATCCGAAGAAAATAGCAGTCAGGTACGTACTAGCTAGTTAGTTCAGAACTTGAACAGCTAGTTAATTTCCGGAGATCAGGCAGACAGACAACATGGCACAGCTTAATTTTCTTGTGCTCACTGCATTCAGGTACCTGTCGTCTTGGTTCGTCTTCGATGTATGCTCGACTGTTCCATTCCACTCCATCAGCCTGCTGTTCAACGAGCACGGGCATGACCTTGGCTTCAAGTTTCTCAATGTTCTCAGGCTCTGGCGGTTGCGTCGAGTCAGTTCGATGTTTGCGAGGTAAACGCCACACGTGCCCTACCAATCCACTGTAAAAGGTTATACGCTAGCAGTAGTCAGCATGTGACATATATATACTATACTTTGATACACCATATATAGGCTTGAGAAGGACATCCGGTTCAACTACGCGGTGATACGCTGCACGAAGCTCATCTCGGTACGTCCATGATACGATATCTTTTCCTCTGATCAGTACGTTCTATTCCTCTGATCAGTACGTTCTACTCCACCAACGAGCAAAACGAAACTTCTATCTGCATGGCAACACCAGGTCACCCTCTTCGCGATACACTGCGCCGGGTGCATCAACTACCTTATCGCCGACAGGTACCCGGACCCGAGGAGGACATGGATCGGCGCCGTGATGCCCAACTTCAGGGAGGACGGGCTGTGGATCCGGTACGTGACGGCCATGTACTGGTCCATCACGACGCTGACCACCACGGGCTACGGCGACCTGCACGCCGAGAACGCCAGGGAGATGCTGTTCGGCATCTGCTACATGCTCTTCAACCTCTGGCTCACCGCCTACCTCATCGGCAACATGACCAACCTCGTCGTCCACAGCACCAGCCGCACCCGAGACTTTGTACGTACTGTCCGATCCTACCAAAGCTTCTGTGCTTTTGTTCTCTGTATTGTGGTTTGACGATCGAAATGGCTTGTGCGTTATTTGCAGAGGGATGTGGTTCAGGCCGCCTCAGAATTCGCGGCGAGGAACCAGCTGCCGCAGCAAATAGAGGAGCAGATGCTGAACCACATATGCCTCCGGTACAAGACCGATGGCCTCAAGCAGCAGGAGACGCTAGACGTCCTCCCGAAGGCGATGCGATCCAGCATTTCTCACTACCTCTTCTTCCGGGTTGTTCAAGGAGCCTACCTGTTCAAGGGAGTCTCCTCAAGGTTCATCCAGCAGTTGGTGAGAAACGAGGCTGAATTTTGCATAAAAAATTGCGTAATAGAAGACCCTCATTAACAATTTGGTTGTATATATGCAGGTAACAGAGATGCAAGCAGAGTACTTCGCCCCAAAGGAAGACATCATACTGCAGAATGACAGCCCATCGGACTTGTATCTTCTTGTATCCGGAGCAGTAGTACGTAAAATCTAGTACTTTAATACTACCTATATATGTATGACCAGTGCACAAATCGTAACGGAAAATGAATTTCTACTTACAGGACATTCTGGTATTCCTAGATGGAACAGAACAGGTAATGGTATCTCCTGAGTTGCTGTTTCTGAAAAGACAGATAACGGGTTTCCGGACAAAGATCAGACAAGCACTTGAAAAAATGACACCTGGGGCCGTATCATGTTTCAGGTTTACGGGAGAGCAGCTGAGGGAGAACTGCTAGGGGAGATAGGTGTACTGTGCAACAAGCCACAGTCGTTCACTTTCCGGACGACAAAACTATCTCAGATTCTGAGGATCAGTAGGACCAAGCTGTTGGGTATCATCCAGGAGAACAGAGAAGACGGCGACATCATCAGAAGCAACCTTCAGCAAGTGAACGTATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA004483