BGIOSGA004500

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Revision as of 11:07, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA004500| Description = Glutelin| Definition = Oryza sativa Indica Group BGIOSGA004500, complete gene.| tag = OS01G0762500| tid = BGIOSGA004...")
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Gene Name

BGIOSGA004500

Description

Glutelin

Definition

Oryza sativa Indica Group BGIOSGA004500, complete gene.

LocusTag

OS01G0762500

Ensembl Transcript ID

BGIOSGA004500-TA

Ensembl Protein ID

BGIOSGA004500-PA

Length

1776

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:35355019..35356794

Sequence Coding Region

35355019..35355349,35355439..35355713,35355818..35356297,35356381..35356794

Genome Context

<gbrowseImage1> name=IndicaChromosome01:35355019..35356794 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:35355019..35356794 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCATCCATAAATCGCCCCATAGTTTTCTTCACAGTTTGCTTGTTCCTATTGTGCAATGGCTCTCTAGCCCAGCAGCTATTAGGCCAGAGCACTAGTCAATGGCAGAGTTCTCGTCGTGGAAGTCCAAGAGAATGCAGGTTCGATAGGTTGCAAGCATTTGAGCCAATTCGGAGTGTGAGGTCTCAAGCTGGCACAACTGAGTTCTTCGATGTCTCTAATGAGCAATTTCAATGTACCGGAGTATCTGTTGTCCGTCGAGTTATTGAACCTAGAGGCCTTCTACTACCCCATTACACTAATGGTGCATCTCTAGTATATATCATCCAAGGGAGAGGTATAACAGGGCCAACTTTCCCAGGCTGTCCTGAGTCCTACCAACAACAGTTCCAACAATCAGGCCAAGCCCAATTGACCGAAAGTCAAAGCCAAAGTCATAAGTTCAAGGATGAACATCAAAAGATCCACCGTTTCAGACAAGGAGATGTAATTGCATTGCCTGCTGGTGTAGCTCATTGGTGCTACAATGATGGTGAAGTGCCAGTTGTTGCCATATATGTCACTGATCTCAACAACGGTGCTAATCAACTTGACCCTAGGCAAAGGGATTTCTTGTTAGCTGGAAATAAGAGAAACCCTCAAGCATACAGGCGTGAGGTTGAGGAGCGGTCACAGAACATATTTAGTGGCTTTAGCACTGAACTACTTAGCGAGGCTCTTGGCGTAAGCAGCCAAGTGGCAAGGCAGCTCCAATGTCAAAATGACCAAAGAGGAGAAATTGTCCGTGTCGAACATGGGCTCAGTTTGCTGCAGCCATATGCATCATTGCAGGAGCAGGAACAAGGACAAGTGCAATCAAGAGAGCGTTATCAAGAAGGACAATATCAGCAAAGTCAATATGGAAGTGGCTGCTCTAACGGTTTGGATGAGACCTTTTGCACCATGAGGGTAAGGCAAAACATCGATAATCCTAACCGTGCTGATACATACAATCCAAGAGCTGGAAGGGTTACAAATCTCAACACCCAGAATTTCCCCATTCTTAATCTTGTACAGATGAGTGCAGTCAAAGTAAATCTATACCAGAACGCACTCCTTTCACCATTTTGGAACATCAACGCTCACAGCGTCGTGTATATTACTCAAGGCCGTGCCCGGGTTCAAGTTGTCAACAACAATGGAAAGACAGTGTTCAACGGCGAGCTTCGCCGCGGACAGCTGCTTATTATACCACAACACTATGCAGTTGTAAAGAAGGCACAAAGAGAAGGATGTGCTTACATTGCATTCAAGACCAATCCTAACTCTATGGTAAGCCACATTGCAGGAAAGAGTTCCATCTTCCGTGCTCTCCCAAATGATGTTCTAGCAAATGCATATCGCATCTCAAGAGAAGAGGCTCAGAGGCTCAAGCATAACAGAGGAGATGAGTTCGGTGCATTCACTCCAATCCAATACAAGAGCTACCAAGACGTTTATAATGCGGCAGAATCCTCTTAG</cdnaseq>

Protein Sequence

<aaseq>MASINRPIVFFTVCLFLLCNGSLAQQLLGQSTSQWQSSRRGSPRECRFDRLQAFEPIRSVRSQAGTTEFFDVSNEQFQCTGVSVVRRVIEPRGLLLPHYTNGASLVYIIQGRGITGPTFPGCPESYQQQFQQSGQAQLTESQSQSHKFKDEHQKIHRFRQGDVIALPAGVAHWCYNDGEVPVVAIYVTDLNNGANQLDPRQRDFLLAGNKRNPQAYRREVEERSQNIFSGFSTELLSEALGVSSQVARQLQCQNDQRGEIVRVEHGLSLLQPYASLQEQEQGQVQSRERYQEGQYQQSQYGSGCSNGLDETFCTMRVRQNIDNPNRADTYNPRAGRVTNLNTQNFPILNLVQMSAVKVNLYQNALLSPFWNINAHSVVYITQGRARVQVVNNNGKTVFNGELRRGQLLIIPQHYAVVKKAQREGCAYIAFKTNPNSMVSHIAGKSSIFRALPNDVLANAYRISREEAQRLKHNRGDEFGAFTPIQYKSYQDVYNAAESS</aaseq>

Gene Sequence

<dnaseqindica>1..331#421..695#800..1279#1363..1776#ATGGCATCCATAAATCGCCCCATAGTTTTCTTCACAGTTTGCTTGTTCCTATTGTGCAATGGCTCTCTAGCCCAGCAGCTATTAGGCCAGAGCACTAGTCAATGGCAGAGTTCTCGTCGTGGAAGTCCAAGAGAATGCAGGTTCGATAGGTTGCAAGCATTTGAGCCAATTCGGAGTGTGAGGTCTCAAGCTGGCACAACTGAGTTCTTCGATGTCTCTAATGAGCAATTTCAATGTACCGGAGTATCTGTTGTCCGTCGAGTTATTGAACCTAGAGGCCTTCTACTACCCCATTACACTAATGGTGCATCTCTAGTATATATCATCCAAGGTTCGTGCAACAATTTAAGTGCATAATGAATTAATGATCAGCTTCCATGTTTATATTGCTTGTAATTAACATGCATGCCATACTTTCAGGGAGAGGTATAACAGGGCCAACTTTCCCAGGCTGTCCTGAGTCCTACCAACAACAGTTCCAACAATCAGGCCAAGCCCAATTGACCGAAAGTCAAAGCCAAAGTCATAAGTTCAAGGATGAACATCAAAAGATCCACCGTTTCAGACAAGGAGATGTAATTGCATTGCCTGCTGGTGTAGCTCATTGGTGCTACAATGATGGTGAAGTGCCAGTTGTTGCCATATATGTCACTGATCTCAACAACGGTGCTAATCAACTTGACCCTAGGCAAAGGGTAATTAAGCAGAACTTTTCCAAAGCTAAACATTTTTACTACTATTTTGATATTTTTATTCCACTTATCTTAGATGATGATTTAGCCTTTTAATCAACTGTTAGGATTTCTTGTTAGCTGGAAATAAGAGAAACCCTCAAGCATACAGGCGTGAGGTTGAGGAGCGGTCACAGAACATATTTAGTGGCTTTAGCACTGAACTACTTAGCGAGGCTCTTGGCGTAAGCAGCCAAGTGGCAAGGCAGCTCCAATGTCAAAATGACCAAAGAGGAGAAATTGTCCGTGTCGAACATGGGCTCAGTTTGCTGCAGCCATATGCATCATTGCAGGAGCAGGAACAAGGACAAGTGCAATCAAGAGAGCGTTATCAAGAAGGACAATATCAGCAAAGTCAATATGGAAGTGGCTGCTCTAACGGTTTGGATGAGACCTTTTGCACCATGAGGGTAAGGCAAAACATCGATAATCCTAACCGTGCTGATACATACAATCCAAGAGCTGGAAGGGTTACAAATCTCAACACCCAGAATTTCCCCATTCTTAATCTTGTACAGATGAGTGCAGTCAAAGTAAATCTATACCAGGTAAAATGAACAGCACATTTTTTTTCTTGGTAAAAGCTTTAATGCACACAATATGCTAATGATGTGCACCTTTTCTATTGCAGAACGCACTCCTTTCACCATTTTGGAACATCAACGCTCACAGCGTCGTGTATATTACTCAAGGCCGTGCCCGGGTTCAAGTTGTCAACAACAATGGAAAGACAGTGTTCAACGGCGAGCTTCGCCGCGGACAGCTGCTTATTATACCACAACACTATGCAGTTGTAAAGAAGGCACAAAGAGAAGGATGTGCTTACATTGCATTCAAGACCAATCCTAACTCTATGGTAAGCCACATTGCAGGAAAGAGTTCCATCTTCCGTGCTCTCCCAAATGATGTTCTAGCAAATGCATATCGCATCTCAAGAGAAGAGGCTCAGAGGCTCAAGCATAACAGAGGAGATGAGTTCGGTGCATTCACTCCAATCCAATACAAGAGCTACCAAGACGTTTATAATGCGGCAGAATCCTCTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA004500