BGIOSGA004507

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Revision as of 11:07, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA004507| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA004507, complete gene.| tag = P0403C0...")
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Gene Name

BGIOSGA004507

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA004507, complete gene.

LocusTag

P0403C05.7

Ensembl Transcript ID

BGIOSGA004507-TA

Ensembl Protein ID

BGIOSGA004507-PA

Length

2987

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:35475952..35478938

Sequence Coding Region

35475952..35476274,35476466..35476577,35476751..35476910,35477323..35477471,35477566..35477717
,35478589..35478703,35478801..35478938

Genome Context

<gbrowseImage1> name=IndicaChromosome01:35475952..35478938 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:35475952..35478938 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGCGGCTGCGCGCGTGCACCCGCCTCCGCCGCCTCCTCGCGACGAGGCCTCCTCATCCGGCTCCGCCGCCGCCGCCGCCGAGGACGACGACGACGGGCCAGACTCTCCCGCGCTTCTCCGCTAGGGCCTTCTCGTCGGCCTCGGCGGTCGCCGTCGCGGTGCCGCACGAGGCGCGCGACTCCGGCCTCGGGAGCTCGGCCTACTGGGCCTGGATCCGGGCGGCGGCCGAGTCGGCCCCGGCCCCGCCTCCGCAGCAAGAGGAGGAGGATGAGGGCCTCGCGCGCTGCATCCCCGTCAAGGCGTACTTCCTCTCCACCAGCATTGATTTGAAGAGTTTGCAGGCGGACCATGGGAGCGACGTGGTACCTCCGTCGACCCGATCATTGAACTACATTGCACTCCGATACTCAGAATTCCCTCAAGAAATCATGGACATTGGAGTTAAGGACAACAGATTTTGCTATCGCTATGTGGTTGTGTTCCAATATGGTTCGGCTGTGCTTTTCAACATTGCTGACCATGAGGCTGAGCACTATCTTGATATCATCAGGAAACATGCTTCAGGATGGCTTCCGGAGATGAGAAAAGATGATTATGCAGTAGTTGAGAAGCCCTCCCTGACAACATGGATGAAAGGAGGTCTTGACTATATAGTTCTTAAAAGCCTAGATACAGATGGAATTCGCATCATTGCAAGTGTTCTTGGCCAAAGTATTGCTCTTGATCATTACATACGGCAGGTCGATGACATGGTTGAGGAATTTACTGAAATTAATCGTGTCATGGAGAAGACTGGGAACTTTACCATGCAAAGAAAGAAGCTGTTCCAACTTGTTGGCAAGGCTAATTCTAACCTTGCTGATGTTATCATCAGACTTGGCCTTTTTGACAGGTCTGAAATCGCTTGGAAAAATTCAAATTATGCTCAAATACTTGAGTATCTTCGGGAAGAATATGAGCTGAACCAACGTTTTGGAAGCCTCGACTTCAAATTGAAATTTGTGGAGCACAACATTCATTTTCTTCAAGAAGTTCTCCAGAATAGAAGATCAGATTTGCTGGAGTGGGGTGTCATTATACTGCTGATTATCGAGATTGTCATCTCATTATACGAAATTATCAAGGATTCCAGCATGATGTCCTGA</cdnaseq>

Protein Sequence

<aaseq>MGRLRACTRLRRLLATRPPHPAPPPPPPRTTTTGQTLPRFSARAFSSASAVAVAVPHEARDSGLGSSAYWAWIRAAAESAPAPPPQQEEEDEGLARCIPVKAYFLSTSIDLKSLQADHGSDVVPPSTRSLNYIALRYSEFPQEIMDIGVKDNRFCYRYVVVFQYGSAVLFNIADHEAEHYLDIIRKHASGWLPEMRKDDYAVVEKPSLTTWMKGGLDYIVLKSLDTDGIRIIASVLGQSIALDHYIRQVDDMVEEFTEINRVMEKTGNFTMQRKKLFQLVGKANSNLADVIIRLGLFDRSEIAWKNSNYAQILEYLREEYELNQRFGSLDFKLKFVEHNIHFLQEVLQNRRSDLLEWGVIILLIIEIVISLYEIIKDSSMMS</aaseq>

Gene Sequence

<dnaseqindica>1..323#515..626#800..959#1372..1520#1615..1766#2638..2752#2850..2987#ATGGGGCGGCTGCGCGCGTGCACCCGCCTCCGCCGCCTCCTCGCGACGAGGCCTCCTCATCCGGCTCCGCCGCCGCCGCCGCCGAGGACGACGACGACGGGCCAGACTCTCCCGCGCTTCTCCGCTAGGGCCTTCTCGTCGGCCTCGGCGGTCGCCGTCGCGGTGCCGCACGAGGCGCGCGACTCCGGCCTCGGGAGCTCGGCCTACTGGGCCTGGATCCGGGCGGCGGCCGAGTCGGCCCCGGCCCCGCCTCCGCAGCAAGAGGAGGAGGATGAGGGCCTCGCGCGCTGCATCCCCGTCAAGGCGTACTTCCTCTCCACCAGGTACGTTGGAAGCATATGCGCGTGCTTGCACGACAGGTGTTTGTTGATTTTTTTTTTCAAAGGTGTATGTTGCTATCATATTGTGCTAATTCAATCTTCCTTATGCCATTTTGATGGATGGGCACGACTAATAGATGCAGAGGACTAAAATGATGTTTTGTTTGTCTGATTTTTCTTTCCCCCTGTGGCAGCATTGATTTGAAGAGTTTGCAGGCGGACCATGGGAGCGACGTGGTACCTCCGTCGACCCGATCATTGAACTACATTGCACTCCGATACTCAGAATTCCCTCAAGAAATCATGGTTAGTGATTCCAATTTACCATCACATAGTTCCTGGTCCAAATGCTTTTGAATCAACAAATTTAAGTTATTAACTCCACCTTGGTAATTTGTTGAACGCAATTTTGTGAAATCTCTCTTTTTCTGCACTGCAAAATTTAACTTCTCTGCAATGATTGGCTAACATTTCTGTAGGACATTGGAGTTAAGGACAACAGATTTTGCTATCGCTATGTGGTTGTGTTCCAATATGGTTCGGCTGTGCTTTTCAACATTGCTGACCATGAGGCTGAGCACTATCTTGATATCATCAGGAAACATGCTTCAGGATGGCTTCCGGAGATGAGAAAAGATGGTATTACACATGCTATTCACTATCTTGCTTGTCATATTTTACCTTGTGAACAAAGACATTTTACTCGGTACTTCTAGTTTTCTTCACACTGTTCCATTATATTGTGTGTACGACTAGCATATAATTCAATTGCCTTCTATGTTAGTGAAAATTACATTTTGATAAAATCCCATAGAACTACAAGAGAGTCCATATGCATCTGATTGATATTGGACGTGATGCATTCATAGGCTGGTAATATGTGAAGTCATTTAGAGTTGAGTAGCTCCCCTTCTACCCCCTAAACAGTTGCAAAAGCTTTTCTTTCACTGGGACAAAACTGGCTCATTTGCAAAGTAGTGAAGTAGCGTGTAAGGTTAAGAATTTAAGATTGTATTACATCCTCACATGATATCAATTCTACAATGACCAGATTATGCAGTAGTTGAGAAGCCCTCCCTGACAACATGGATGAAAGGAGGTCTTGACTATATAGTTCTTAAAAGCCTAGATACAGATGGAATTCGCATCATTGCAAGTGTTCTTGGCCAAAGTATTGCTCTTGATCATTACATACGGCAGGTACTGAAAAGGGGCAACTTCGACAAGCTTTTTCCATGTGGTGGTAGCCTTGAAATTTTGTTCTTAAGGTTCTAAAAAACACTAATTTTGGTAGGTCGATGACATGGTTGAGGAATTTACTGAAATTAATCGTGTCATGGAGAAGACTGGGAACTTTACCATGCAAAGAAAGAAGCTGTTCCAACTTGTTGGCAAGGCTAATTCTAACCTTGCTGATGTTATCATCAGACTTGGCCTTTTTGACAGGTATCTCTTCTACAATCTAAGTACCACATTCCCTTTTTAGATGGTTCATGTCTTCCGTTGCAATTGCATAATTTCCTCTCTTTTTTATCATGTATGGAAGTAATCCCATTGTATACCAATCCTACGTGCATTGTGACAAGCTATGCTGTGGGGGAAGGAGGCATGTAAAGCAAGATGCTACTCAGATATTTCATGTAGACATCCTATAAACATGGGTTACTTATTTCGCACAAAATTTCCTTTTGAGGAAAACAATCAAATGAGATTTACACTGAGTAGTTTGATATTCTTTTCTGGTGTGTTTAAAAGGTTAATGCATTTTAGCTCTGAACTGTAAAATTGGAGTTTACATGCCACAGCTCTGTGTTATAAAAGCACTTTGTTCATTATACAAATGTTATGTTATTGTTTTCCCTGATGCTTTGCATTAACCCTAGCTCTGCAAATGCCATTTTACTTAAGGAAGCATATTCATTTGCCATTTAAGTAAGGGAATAATTGAAGGAAAGGAAGAATTATATGGCTTCTATAACATAAATTATTTATATTCCGAGTGAAGGTGGCATTTTTTGTCGGAAGTCTCATTAGTTAATGCTGATTTGCCATAATACTCCACCTTTTAATAAAATTCCTCTTTCCATATCATGCTTAGCTTATGAAAATTGCAAAACATTTTGGTGTCCTCAACTGGCTGTTTCCAGTTGTAAGGCTTGGAATTTGCCAACTATCCACATGGTTTGATAAGAACCCAAGACTACCATGACAAAAAAATATGGATAAAAGCTGATCTAAAGGGAATTTTACGACATCGTGGATACGGTCTCCTTGCGTATCTTATGGCAGCCCCTTAAAAGAATGACTTTTTCTTCAGGTCTGAAATCGCTTGGAAAAATTCAAATTATGCTCAAATACTTGAGTATCTTCGGGAAGAATATGAGCTGAACCAACGTTTTGGAAGCCTCGACTTCAAATTGAAATTTGTGGAGGTAAGTTCTTCGATTTGCGTTCATTTTCAGTGTATTAGCTGATTTTTTAAAAAAATTTTGAGTTCCCATTCGTGCTTACACTTTATTATTGCAACAGCACAACATTCATTTTCTTCAAGAAGTTCTCCAGAATAGAAGATCAGATTTGCTGGAGTGGGGTGTCATTATACTGCTGATTATCGAGATTGTCATCTCATTATACGAAATTATCAAGGATTCCAGCATGATGTCCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA004507