BGIOSGA004509

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Revision as of 11:07, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA004509| Description = BGIOSGA004509| Definition = Oryza sativa Indica Group BGIOSGA004509, complete gene.| tag = | tid = BGIOSGA004509-TA|...")
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Gene Name

BGIOSGA004509

Description

BGIOSGA004509

Definition

Oryza sativa Indica Group BGIOSGA004509, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA004509-TA

Ensembl Protein ID

BGIOSGA004509-PA

Length

1843

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:35511475..35513317

Sequence Coding Region

35511475..35512251,35512546..35512618,35513046..35513317

Genome Context

<gbrowseImage1> name=IndicaChromosome01:35511475..35513317 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:35511475..35513317 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAAACCGCTGTACTAGTGTTTGCAGGGAAGTCACTCGCAACCCCTGCAATCTCCTTCTTTGTCAACAAGGCATTCAGCTACCTGAACGAGTACCGCAAGGCTGAAGGATTGGAGGCCGTGAAGAACAGGCTAGAGGAGAACATACCCAAGATCCAATCAGTGATCGATGTCGCTGATCCTGATTACATCAAGGACAAGAGTGAAGCCCTAGATGCATGGCTGTGGCAGCTCAGGGATGCAGTCGAGGAGGCTGAGGATGCCATCGATGAGCTCGAAGTGGAGAGGGATCAAAATAAGGTTAGTCATCAGGCCGGCTCTTCTTCTTTTACACGGATGAAGCATAAATTTGTCCAGTCTGTTAAGCATGTTAGAGTGTTGGGTACGACATCTAATTCCCCTCTCAAGAGGTTAAAGAAAGCCTTGGAAGGTTTAGATGAGGCTGCTAAAGGAGTCAAGAATTTTCTCACACTTGTACAAATTCATCAAAACACAAGATCCAACTTAAACAATCCAGAACAAGATGATATTAGCTTCCGTGCCAAGGGGAAGGACTTAAATGCTGATAGGGTGTTCGGTAGAGAAAATGAGAAGGAACATATTGTTGGATGGTTGACCAATACATCAAGTGAAGATAACCAAGATGCCAAGAACAATAATCATGTCCCCATTATGTCAATAGTTGGCCATGGCGGCATTGGGAAAACCACTTTGGCTCAGCTCATCTCCCATGACTCCAGAATCAAGAAACATTTTGACACCGTGATCTGGGTTGCTATCCCCAAGAATTTGAAGACGTTCCAACAAGNTTGGAGAAGAAATCGCAAAGAAACTAAGAGGGTGTCCCTTGGTGAATGTGCAAGAATTGCTGATGTTGCTAGCTCCAAGAAGCCGAAACCAACAGTACGCCACCTATCTGTTGCTGGTATTGATGGTTTTCCAGTCGACGCCATCAAAAGTTTGTCCCAGTTCAAAAATCTGCGCACCATTATCATTGAAGATTGCCATGATATCCAGGATGACACTTCACGGGAAGTGGAGAAAGTTATAGAAAGCTTAAAAGCCCTGCGTGTCGTGCAATACCACATGTTCAGTAGATCCCGATTCCCTGGAAAAAGCTAA</cdnaseq>

Protein Sequence

<aaseq>METAVLVFAGKSLATPAISFFVNKAFSYLNEYRKAEGLEAVKNRLEENIPKIQSVIDVADPDYIKDKSEALDAWLWQLRDAVEEAEDAIDELEVERDQNKVSHQAGSSSFTRMKHKFVQSVKHVRVLGTTSNSPLKRLKKALEGLDEAAKGVKNFLTLVQIHQNTRSNLNNPEQDDISFRAKGKDLNADRVFGRENEKEHIVGWLTNTSSEDNQDAKNNNHVPIMSIVGHGGIGKTTLAQLISHDSRIKKHFDTVIWVAIPKNLKTFQQXWRRNRKETKRVSLGECARIADVASSKKPKPTVRHLSVAGIDGFPVDAIKSLSQFKNLRTIIIEDCHDIQDDTSREVEKVIESLKALRVVQYHMFSRSRFPGKS</aaseq>

Gene Sequence

<dnaseqindica>1..777#1072..1144#1572..1843#ATGGAAACCGCTGTACTAGTGTTTGCAGGGAAGTCACTCGCAACCCCTGCAATCTCCTTCTTTGTCAACAAGGCATTCAGCTACCTGAACGAGTACCGCAAGGCTGAAGGATTGGAGGCCGTGAAGAACAGGCTAGAGGAGAACATACCCAAGATCCAATCAGTGATCGATGTCGCTGATCCTGATTACATCAAGGACAAGAGTGAAGCCCTAGATGCATGGCTGTGGCAGCTCAGGGATGCAGTCGAGGAGGCTGAGGATGCCATCGATGAGCTCGAAGTGGAGAGGGATCAAAATAAGGTTAGTCATCAGGCCGGCTCTTCTTCTTTTACACGGATGAAGCATAAATTTGTCCAGTCTGTTAAGCATGTTAGAGTGTTGGGTACGACATCTAATTCCCCTCTCAAGAGGTTAAAGAAAGCCTTGGAAGGTTTAGATGAGGCTGCTAAAGGAGTCAAGAATTTTCTCACACTTGTACAAATTCATCAAAACACAAGATCCAACTTAAACAATCCAGAACAAGATGATATTAGCTTCCGTGCCAAGGGGAAGGACTTAAATGCTGATAGGGTGTTCGGTAGAGAAAATGAGAAGGAACATATTGTTGGATGGTTGACCAATACATCAAGTGAAGATAACCAAGATGCCAAGAACAATAATCATGTCCCCATTATGTCAATAGTTGGCCATGGCGGCATTGGGAAAACCACTTTGGCTCAGCTCATCTCCCATGACTCCAGAATCAAGAAACATTTTGACACCGTGATCTGGGTTGCTGTATCTATGAGCTTTGATGCAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGAGAACAGGAGTGTGTGGAAGGAAGATTTTGTTGACAAGCCGAATGCAATCAGTTGCAGATTTAGCATCAGCGGTAATGAGATGTGAAAGGGAGTTCTTCCCATTATGTGGACTTGAAGAAGATGAAAATTTAAGACTTTTTAATCATCATGTCTTCATTAATCCAGATCCCCAAGAATTTGAAGACGTTCCAACAAGNTTGGAGAAGAAATCGCAAAGAAACTAAGAGGGTGTCCCTTGGTAACTAAGGTTGTCGCTGGGCATCTACGGGCACACATGAAAGTTCAATTTTGGAATACATTTTTGCATGAACATCTGGATAATTTTGATGGAAGTATGGAAGATGTTGTCAAAGTTCTCAAGTTAAGTTACTACCATTTGGTACCTGGCCTACAAGTGTGCTTCCGATATTGTAGCATATTCCCAAAAAACCATGAATTCAAAAAACAAGAATTGGTGAAGATGTGGATAGCTCCAGGATTGATCTCCCAGACCACAGGTGAAGCAGAGAGAGCACAGGATGCTGCAGAAGAGTACTTGGATCTGCTGAATAGAAAGTCATTCTTTGAACTCAAGTTGAGAAACTTCCGTTTCGGAAGGAACGAATGCCATGAATATTTTGTGATGCATGACTTAATGCATGATTTGGCAACATGGGTTTCTTCAGGTGAATGTGCAAGAATTGCTGATGTTGCTAGCTCCAAGAAGCCGAAACCAACAGTACGCCACCTATCTGTTGCTGGTATTGATGGTTTTCCAGTCGACGCCATCAAAAGTTTGTCCCAGTTCAAAAATCTGCGCACCATTATCATTGAAGATTGCCATGATATCCAGGATGACACTTCACGGGAAGTGGAGAAAGTTATAGAAAGCTTAAAAGCCCTGCGTGTCGTGCAATACCACATGTTCAGTAGATCCCGATTCCCTGGAAAAAGCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA004509