BGIOSGA004520

From RiceWiki
Revision as of 11:07, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA004520| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA004520, complete gene.| tag = OsI_038...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA004520

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA004520, complete gene.

LocusTag

OsI_03880

Ensembl Transcript ID

BGIOSGA004520-TA

Ensembl Protein ID

BGIOSGA004520-PA

Length

2921

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:35668374..35671294

Sequence Coding Region

35668374..35668508,35668630..35668980,35670081..35670161,35670512..35671294

Genome Context

<gbrowseImage1> name=IndicaChromosome01:35668374..35671294 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:35668374..35671294 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGCTCGAGCTCGGTGGCGAATCCTCGCGCTGCCGCTCGCTCTTCTCCTAGCGGTCGGGTCGTCGCCTGGCCTCGTGAGGCAGGCGTCGTCGTCGGCGGCGGCCAAGCCTCCCGTCCCCAAGGCCATCTCGGACCTGAGGGAGGCGATCGTGAAGGGGCTGGGGTTCCAGTCGGAGGAGCTCAAGGTGTCCGGGTTCGACGTGCGCGACGCGCTCGTGGGGCAGGCGGTGGCGTACGAGTTCGACATCGAGGTCGGGAGGAAGGTGGTGCCGGTGCGCCTGCTCGAGGACGTCAACCGATGGGACTTCGTCGACCTGCCCATCTTCCGGTCCCAGGCCGACGCCGACGACACGGCGCTCGCCGAGATCCGGCGTGGCAAGAGCGGGAAGCGAGCCTTCGACCCGACCCTGCCACCGTTCCAGCTCGCCGGGCCCATGGAGCTCTGGATCCAGGACGGCGACGACGTTAGGCTCGCCTTGCCGAGGAGGAGATTCTCCTCTGAAAACTACATCACCGTGATGATTCCAGAGCCCCCAGAGACAGAGCAGGAAGAAGACCTTGAACATGATGTGGAAGCAGGGACGCTGAAGAAAGTAGTGCTATCAGATGGTGCCGTGGTAACAGTGAAGGGTGCCAAGGCTGTGAGCCTCCGGTTGCCACTTGAATTACCGCTCCCTCTCAACCGCACCACTTACAAGGGCCGGTTGTCAAGCTTGATATCCATTGCGCAAACGCTACGGGGCGCCGCCCGGTCGAACCAGAAGCCGCTGCTCTCCCTCCGCATCGAAGGTCCGACGTCGTTGTCCTCGACTCCTTCCATGTCTCCCAATGACAGGCTTAAGCTCAAACGGTTGGCCCCAGGCCAAGTGGAGCTCTCCTCGCGTGCAATCCCTGCTGTTACAGACGATGATGGTGATGGATCACACGCAGCTGGATTGTGGCCCCTTCTGTCACTGAATGGGTCAGATGGCAGCCTGCAGGGGTTTGAGGAGTTGCTGGCCTCGGTTCTTGGAAAGAAGGCAGGTGAGAAGGGGACGTTCAAGCTGTTGAAGGCGCGAGCTTCTGCCCAAACGTACGTCAAGATGGGGTTTGCGGTGGAGAAGAGGATTGCTGACGGAGAGGTGAACTGGTCCAACTTCCCGGAGTGGAAGACGAAGCCCAAGAAGTTGAGGGCGCACTACGAGGTTCTTGCTCGTGTGGAGGGTGGCCAGGCGATCCCTGAAAGGATCGCGCAGGTGCAGCCTTTTGAGGCCGACGAGGCCATGTCAGAGAGCGTGCTCACCGGGAATGTGTCGATGTCGAAGACGGAGGTGGTTCATCCGCCGCCGGTTTACTTCACTCTTTGA</cdnaseq>

Protein Sequence

<aaseq>MAARARWRILALPLALLLAVGSSPGLVRQASSSAAAKPPVPKAISDLREAIVKGLGFQSEELKVSGFDVRDALVGQAVAYEFDIEVGRKVVPVRLLEDVNRWDFVDLPIFRSQADADDTALAEIRRGKSGKRAFDPTLPPFQLAGPMELWIQDGDDVRLALPRRRFSSENYITVMIPEPPETEQEEDLEHDVEAGTLKKVVLSDGAVVTVKGAKAVSLRLPLELPLPLNRTTYKGRLSSLISIAQTLRGAARSNQKPLLSLRIEGPTSLSSTPSMSPNDRLKLKRLAPGQVELSSRAIPAVTDDDGDGSHAAGLWPLLSLNGSDGSLQGFEELLASVLGKKAGEKGTFKLLKARASAQTYVKMGFAVEKRIADGEVNWSNFPEWKTKPKKLRAHYEVLARVEGGQAIPERIAQVQPFEADEAMSESVLTGNVSMSKTEVVHPPPVYFTL</aaseq>

Gene Sequence

<dnaseqindica>1..135#257..607#1708..1788#2139..2921#ATGGCCGCTCGAGCTCGGTGGCGAATCCTCGCGCTGCCGCTCGCTCTTCTCCTAGCGGTCGGGTCGTCGCCTGGCCTCGTGAGGCAGGCGTCGTCGTCGGCGGCGGCCAAGCCTCCCGTCCCCAAGGCCATCTCGGTGAGTTACACGAAGAAATTTCTCCTCTTCCAACGCCCGATTGGCCGATTCGTCCTTGTCGCGGAACGATTCTGATATGTTAATGTAACGATGCGCGCGTGTGGCGGATCGATCGGTGCAGGACCTGAGGGAGGCGATCGTGAAGGGGCTGGGGTTCCAGTCGGAGGAGCTCAAGGTGTCCGGGTTCGACGTGCGCGACGCGCTCGTGGGGCAGGCGGTGGCGTACGAGTTCGACATCGAGGTCGGGAGGAAGGTGGTGCCGGTGCGCCTGCTCGAGGACGTCAACCGATGGGACTTCGTCGACCTGCCCATCTTCCGGTCCCAGGCCGACGCCGACGACACGGCGCTCGCCGAGATCCGGCGTGGCAAGAGCGGGAAGCGAGCCTTCGACCCGACCCTGCCACCGTTCCAGCTCGCCGGGCCCATGGAGCTCTGGATCCAGGACGGCGACGACGTTAGGCTCGCCTTGCCGGTAAGAGAATTTTTTTTTTCTTCTCGTGCTTATGGTTAAAAGGATATTTTCATCGGAATGATTTTGTTGTTATTAAGTTGCATGCACCAACCAGTTCAACCTAAAAACTAATATTAGGGAAGATGGGCAATTCAGTTTATATTTCAAAGTACTGTTTGTGTTTAAAAACGATGAATTTTCCTTCAGCAATTTTTTTTAAAAAACATACAAAGTAGAATTAGGTATCAAAGCTAACAATACATCGTTCTACACCTCAAATGTGAAATGTGTCAACAGTTGGGAAAATAGAGATTGTAGAGCATAACTTCAGGTTTCTGATGTCATCTTGATAACAAGGCAAAGTTTCAGTTGCTGCTATAATTAAGCCACCTGACGTCTCATCTGATTGCAATTCAATTTAGTTCTATGAAATTATGGAAGTGAATTTTTGGATTACGTTGATAATTCGTCATCGTCATTTCGTCTGGCGTAATAGGCTCTGAAGTCTGAACTATTTGTGTGCTTGCAGACTTTGAATAACGAACACCAACTTTGTTCACGTATACAAAAGAATGATTTGAATTGAGCTTATGTGTTCATGTATTGTAAGATTTCATTAAGCAATGAATATGATGATTTTTGTCCTGGTGAGTTCAAGAGTCAGTGTTCTGCAAATCTGCGTTAGTATTCTTCATTGTGGATTCTACACCAGAATGGTTTTTCATTACAACATTAGTAGCTTCTTCATTGCGCGTTCTGCTCTGAAGTAATGTTGAGCAAATCTGTATGGAATATCCTACTCCTTTCACAGCAATGGAATGTCTCACATCTGGAGGTTCTGTGATTCCTAGTTAGCTGTAAATACTGTTTTGTGCTAGGCTTAAACTCTGAATATTTACAATATGTGTTTTTTTTTAGACTGGTCACCGGGGGGGGGGGGGAGCTTTTCCACCTGAATTTTGATTTAAAGAGAGATTGAGTACATTAAGTCAGGGTACATTTGAACGGAGGGGAGAAGATAGAATTTGTTTCCAGGATTCTACTACTATCCTGTTGGCACAGTTCAATCTTTCCGCCCAGAGAGTAGCATCCTCTATGCACTTTGTTGCTAAACGATTTAGAGGAGGAGATTCTCCTCTGAAAACTACATCACCGTGATGATTCCAGAGCCCCCAGAGACAGAGCAGGAAGAAGACCTTGAAGTGTGTACAATATGTGTTGTTTTATAATTCCTTTCTCTTTAGAAACTTGACATTATTTTGCAAGGCATAGTTATTTCTAATAGTTGCCTCATAAGTTGGTGGTATAGACTTTTACGCATTTGCCATAATGCTAACACCATCTGCGGCCTGGGGTTCATTTAAGATTGGTCATTTGGTTGCCATTGCTGTATTTAACCATGGGAAGGTTCATCTAACCATTATGTTACACACATGCCTAACATTGCTTTACTGGGTGAATTACTTTATCTACTATGTATTTTAAATACAAAATGCTAATACTGTTTACTATGTATTTTAAATACAATATGCTAATACTGTTTTCTTTACAGCATGATGTGGAAGCAGGGACGCTGAAGAAAGTAGTGCTATCAGATGGTGCCGTGGTAACAGTGAAGGGTGCCAAGGCTGTGAGCCTCCGGTTGCCACTTGAATTACCGCTCCCTCTCAACCGCACCACTTACAAGGGCCGGTTGTCAAGCTTGATATCCATTGCGCAAACGCTACGGGGCGCCGCCCGGTCGAACCAGAAGCCGCTGCTCTCCCTCCGCATCGAAGGTCCGACGTCGTTGTCCTCGACTCCTTCCATGTCTCCCAATGACAGGCTTAAGCTCAAACGGTTGGCCCCAGGCCAAGTGGAGCTCTCCTCGCGTGCAATCCCTGCTGTTACAGACGATGATGGTGATGGATCACACGCAGCTGGATTGTGGCCCCTTCTGTCACTGAATGGGTCAGATGGCAGCCTGCAGGGGTTTGAGGAGTTGCTGGCCTCGGTTCTTGGAAAGAAGGCAGGTGAGAAGGGGACGTTCAAGCTGTTGAAGGCGCGAGCTTCTGCCCAAACGTACGTCAAGATGGGGTTTGCGGTGGAGAAGAGGATTGCTGACGGAGAGGTGAACTGGTCCAACTTCCCGGAGTGGAAGACGAAGCCCAAGAAGTTGAGGGCGCACTACGAGGTTCTTGCTCGTGTGGAGGGTGGCCAGGCGATCCCTGAAAGGATCGCGCAGGTGCAGCCTTTTGAGGCCGACGAGGCCATGTCAGAGAGCGTGCTCACCGGGAATGTGTCGATGTCGAAGACGGAGGTGGTTCATCCGCCGCCGGTTTACTTCACTCTTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA004520