BGIOSGA004526

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Revision as of 11:07, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA004526| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA004526, complete gene.| tag = P0665A1...")
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Gene Name

BGIOSGA004526

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA004526, complete gene.

LocusTag

P0665A11.6

Ensembl Transcript ID

BGIOSGA004526-TA

Ensembl Protein ID

BGIOSGA004526-PA

Length

5046

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:35758009..35763054

Sequence Coding Region

35758009..35758256,35758693..35758846,35759297..35759694,35760012..35760107,35760186..35760258
,35760390..35760672,35760761..35761092,35761178..35761448,35762038..35762319
,35762642..35763054

Genome Context

<gbrowseImage1> name=IndicaChromosome01:35758009..35763054 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:35758009..35763054 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGTTGGGCGTGGCGGAGGGAGCAGTGGGCGGTTGCATGGCTGTCCGTGGCGGTTCTTGGGGCGGCGCTGATGGGCGCCGCCGGCGCGTTCGAGGAGGGCACGGCGGTGTACATTGTGACCATGAAGCAGGCGCCGGTGTTCCACAAGCGCCTCGACCTGGAGAGGTTTGGGAGCAGCAGAGTCGCTGGCGGCGGCGGCGGCGGCGGGGGGGACACCCCGTCCACTAGCATCCTCATGAAGCCAAGGCATGGTCCAGCCCAACCTATGAATTATGGCTCGTACTTAGTTCGTCTTCAAAATTCACTCTTGAAGAGAACACTGAGAGGAGAGCGCTATATAAAGCTCTACAGCTACGGCTATCTGATTAATGGTTTTGCTGTTGTCATCACTCCTCAGCAGGCAGAGAGGCTATCTATGACGAAAGAAGTGGCAAATGTAATGTTGGACTTCTCAGTTAGGACGGCAACAACTCATACCCCTGAATTCCTTGGTTTGCCACAAGGAGCATGGGTTCAAGAGGGTGGCCCACAATGTGCTGGTCAGGGTGTTGTTGTTGGCCTCATCGACACAGGAATCGATCCAACTCATCCCAGCTTCGCAGACGACTTGATAACTGACAGTTATCCTGTTCCTGCTCATTACTCTGGCATTTGCGAGGTTACAAATGATTTTCCATCTGGATCCTGCAACAGAAAACTTGTGGGAGCTAGGCATTTTGCAGCCTCTGCAATAACCAGGGGAGTGTTCAATGCCTCTCAAGATCATGCTTCACCTTCTGATAGTGATGGTCATGGGACCCATACAGCATCCATAGCAGCTGGTAATCATGGAATTCCTGTTGTTGTGGCTGGGCATCATTTTGGGAATGCAAGTGGAATGGCTCCTCGTGCACACATTGCTGTCTATAAAGCTCTGTACAAAAGCTTTGGAGGGTTTGCTGCTGATGTAGTAGCTGCAATAGATCAGGCAGCTGAAGATAATGTTGATATAATCAGCTTATCCATTACCCCAAATAGAAGGCCTCCTGGACTAGCCACCTTCTTTAATCCAATTGACATGGCTCTTCTTTCAGCTGTAAAAGCTGGCATATTTGTCGTGCAAGCTGCAGGAAATACAGGTCCTTCCCCCAAGAGCATGTCATCATACAGTCCATGGATTTTTACTGTAGGAGCATCTGCCCATGACAGGGAATACAACAACTATGTTGTACTTGGCAACAATCTGACCATTACAGGAGTTGGCCTTGCTCCTGGAACAGATGGTGATTCCATGTTCACTCTAGTTGCTGCACCTCATGCACTGAAAAACAATGTAGCCAGTCCTACTGAAATGTCCCTAGGGGAGTGCCAAGATTCAAGCCACCTTGATGAAGATCTGATAAGGGGAAAGATACTGGTCTGCAGCTATTCCATACGATTTGTACTTGGCCTGTCGTCTGTGAAGCAAGCTTTAGATACTGCAAAGAATGTCAGTGCTGCAGGAGTTATATTCTATCTGGATCCATTTGTCATTGGATTCCAGCTGAATCCAACTCCAATGGATATGCCTGGACTTATAATACCATCATCTGATGACTCTAAGGTATTTCTAAATTATTACAATGAGTCCCTTGTGAGAGATGAGACCTCAAACAAAATCGTCAGCTTTGGTGCAATTGCAAAAATACTAGGAGGCCAAAATCCAAATTATGGTATTTCTGCCCCAAAAGTAATGTTTTATTCTGCCAGGGGTCCTGATCCTGAGGACAACTCACTGGCCAATGCTGATATCCTGAAGCCAAATCTGATAGCACCTGGCAGTTCCATTTGGGGTGCTTGGAGTTCTCTTGGATTGGACTCTGCTGAATTTGCTGGTGAAAGTTTTGCAATAATTTCCGGTACAAGTATGGCTGCACCACACGTTGCTGGGCTTGCTGCTCTAGTCAAGCAGAAGTTCCCTTATTTTAGCCCTGCAGCTATAGGTTCTGCATTATCGACTACTACAAGTCTCAGTGACAGGGAGGGGAATCCAATCATGGCACAGAGAACATACGGCAATCCAAATTCAACTCAATCTCCAGCTACACCTTTTGACATGGGAAATGGATTTGTCAATGCTACTGCTGCTTTGGATCCTGGGCTCATATTTGATTCCAGTTACGACGATTTCTTCTCCTTTCTATGTGGCATAAACGGCTCTGCTCCAGTAGTGATGAATTACACCGGCAACAGCTGCAGCTCCTCCGCCATGACAGGGGCTGATCTGAACCTCCCCTCCATCACCATTGCAGTGCTCAACCGGTCAAGAACGATAACAAGAACTGTAACCAACGTGGCGAGCGACGAGCGCTACACGGTCAGTTACAGCGCCCCTTACGGGGTCGCCGTCTCGGCGTCGCCGGCCCAGTTCTTCATCCCCAGCGGGCAGAGGCAGCAGGTGATCTTCGTCGTCAACGCCACCATGAACGGCACCTCCGCGAGCTTCGGCAGCGTCGGCTTCTACGGCGACAAGGGCCACCGGGTGATGATCCCGTTCTCAGTTATCTCCAAGGTTGTGCACGGTTCATGA</cdnaseq>

Protein Sequence

<aaseq>MGWAWRREQWAVAWLSVAVLGAALMGAAGAFEEGTAVYIVTMKQAPVFHKRLDLERFGSSRVAGGGGGGGGDTPSTSILMKPRHGPAQPMNYGSYLVRLQNSLLKRTLRGERYIKLYSYGYLINGFAVVITPQQAERLSMTKEVANVMLDFSVRTATTHTPEFLGLPQGAWVQEGGPQCAGQGVVVGLIDTGIDPTHPSFADDLITDSYPVPAHYSGICEVTNDFPSGSCNRKLVGARHFAASAITRGVFNASQDHASPSDSDGHGTHTASIAAGNHGIPVVVAGHHFGNASGMAPRAHIAVYKALYKSFGGFAADVVAAIDQAAEDNVDIISLSITPNRRPPGLATFFNPIDMALLSAVKAGIFVVQAAGNTGPSPKSMSSYSPWIFTVGASAHDREYNNYVVLGNNLTITGVGLAPGTDGDSMFTLVAAPHALKNNVASPTEMSLGECQDSSHLDEDLIRGKILVCSYSIRFVLGLSSVKQALDTAKNVSAAGVIFYLDPFVIGFQLNPTPMDMPGLIIPSSDDSKVFLNYYNESLVRDETSNKIVSFGAIAKILGGQNPNYGISAPKVMFYSARGPDPEDNSLANADILKPNLIAPGSSIWGAWSSLGLDSAEFAGESFAIISGTSMAAPHVAGLAALVKQKFPYFSPAAIGSALSTTTSLSDREGNPIMAQRTYGNPNSTQSPATPFDMGNGFVNATAALDPGLIFDSSYDDFFSFLCGINGSAPVVMNYTGNSCSSSAMTGADLNLPSITIAVLNRSRTITRTVTNVASDERYTVSYSAPYGVAVSASPAQFFIPSGQRQQVIFVVNATMNGTSASFGSVGFYGDKGHRVMIPFSVISKVVHGS</aaseq>

Gene Sequence

<dnaseqindica>1..248#685..838#1289..1686#2004..2099#2178..2250#2382..2664#2753..3084#3170..3440#4030..4311#4634..5046#ATGGGTTGGGCGTGGCGGAGGGAGCAGTGGGCGGTTGCATGGCTGTCCGTGGCGGTTCTTGGGGCGGCGCTGATGGGCGCCGCCGGCGCGTTCGAGGAGGGCACGGCGGTGTACATTGTGACCATGAAGCAGGCGCCGGTGTTCCACAAGCGCCTCGACCTGGAGAGGTTTGGGAGCAGCAGAGTCGCTGGCGGCGGCGGCGGCGGCGGGGGGGACACCCCGTCCACTAGCATCCTCATGAAGCCAAGGTTTTTGATGGTTTATTACTCCTCTATGATTTGGTTTTGCTCTATCTTTACAGTTTATGCGAAATATGTATGTACGATTCAGTTTGGGTGAGAATCTCTCCTTTTGGGGGAGGAGTTTTTGGGTGATTTTGATTGGTCTATAGTGAAATGTTAGAGATGCTACGTCATTATCTGCCGACAGCTCGGTTCATTGGTGTAGTTGCTGCTAATATTGGGAAGGCTAACCCACTATTGCAGTAGAAATGTTTGGTTTTTTTAACACACAAAAGATATGGAATTTAATACCAACATGAACAATGTGTGTGCGGCTGTGCTGCTAGCGTGCTATTGATGATTCTGTACTTTACTGTTTATCTGACAAGTTTTTAGCAAGTATTTTCCCTTGCTTGTCACAAATTAAGTTTTCGTTTTTTTGCTCACCAGTGTTGTAATGCAGGCATGGTCCAGCCCAACCTATGAATTATGGCTCGTACTTAGTTCGTCTTCAAAATTCACTCTTGAAGAGAACACTGAGAGGAGAGCGCTATATAAAGCTCTACAGCTACGGCTATCTGATTAATGGTTTTGCTGTTGTCATCACTCCTCAGCAGGTATCATTTTTTTCTTTGATTCCACCACTTTTGCACCTTTGTTCTGTAACGTCACATTACAAGTTTTTTTAAGTTGCATTTCAAAAAGAAGTTCTGAAATCTTCAGACTATTAGATGCTGCATCAATGTTCTCGAAAGAAAAGTCCATGGCAATATGAATTATGGCGTGTTGATATCTGCTAGGTTACATACACTGAACACTTATGATTTTGCTTCTACTGCTATCTCTCTCTAAAATTTGCTATGTTTTAGCATGTTAAAATGTTGTACCTTGTATACCCTTGGTTGTTTTATCATCGTTCTCAAGAACCTGTCAGGTTTATTGCATGATTGTTTAGATTTGGTCACTTCTCTAAATCTCAACTGATTTTTATAGCACTAAAAAATATCGAAGCTATTTGGATTGACAATAAGGTTTTAACTGGTTTTCCTTGCATTAAAATTTAAAAGGCAGAGAGGCTATCTATGACGAAAGAAGTGGCAAATGTAATGTTGGACTTCTCAGTTAGGACGGCAACAACTCATACCCCTGAATTCCTTGGTTTGCCACAAGGAGCATGGGTTCAAGAGGGTGGCCCACAATGTGCTGGTCAGGGTGTTGTTGTTGGCCTCATCGACACAGGAATCGATCCAACTCATCCCAGCTTCGCAGACGACTTGATAACTGACAGTTATCCTGTTCCTGCTCATTACTCTGGCATTTGCGAGGTTACAAATGATTTTCCATCTGGATCCTGCAACAGAAAACTTGTGGGAGCTAGGCATTTTGCAGCCTCTGCAATAACCAGGGGAGTGTTCAATGCCTCTCAAGATCATGCTTCACCTTCTGATAGTGATGGTCATGGGACGTAAGTACTATCTGCTGATTCACCCTTTAAAATTATTTGAAGGAGCAAGAATACGAAGCCATTACCAATCTACTACTGGTTTTGTTACATTGTCCAATCACGCTTGCAAATTTTAAGTAAAATAGTAGCATTCTTGAGAATTCATAGTGCTACAGTAGAGTTTTCTTATTTTTCTTGTTTGACTATCCAGTTCTGCAGCTTCTGCCTAAATTATTCATAGATATTTCATTTACATTTTTCACTCCATATGTCATTGTGGCTCTTTTTTTTTGTCAGCATATCTGTTTTCTGATATATTTTTTTTGTACATCGTACAGCCATACAGCATCCATAGCAGCTGGTAATCATGGAATTCCTGTTGTTGTGGCTGGGCATCATTTTGGGAATGCAAGTGGAATGGCTCCTCGTGCACAGTAAGTCCATTACCTTTTTCTGCGGAGACATATAAGATCCACTTTATTCCCAAATGTTAATGACAAATTAATTTCCAGCATTGCTGTCTATAAAGCTCTGTACAAAAGCTTTGGAGGGTTTGCTGCTGATGTAGTAGCTGCAATAGATCAGGTAATGGTTTACCTGCAAGCTAACTATCTTCTTTTGATTTAGCACAAATTAATACCACATTTTAGAATGCTACAATGCATATGGGCACATTGTGACATTTTATTGATGACAAGTCATTCATCATATTGCAGGCAGCTGAAGATAATGTTGATATAATCAGCTTATCCATTACCCCAAATAGAAGGCCTCCTGGACTAGCCACCTTCTTTAATCCAATTGACATGGCTCTTCTTTCAGCTGTAAAAGCTGGCATATTTGTCGTGCAAGCTGCAGGAAATACAGGTCCTTCCCCCAAGAGCATGTCATCATACAGTCCATGGATTTTTACTGTAGGAGCATCTGCCCATGACAGGGAATACAACAACTATGTTGTACTTGGCAACAATCTGACCATTACAGGAGTTGGCCTTGCTCGTAAGTTCCTAGTAGTATTTTCCATTGTGCGCAACTGCACATGGCTGGTGTTGTTTGATTCTAACTTTGTGTTACTCCACAAATACAGCTGGAACAGATGGTGATTCCATGTTCACTCTAGTTGCTGCACCTCATGCACTGAAAAACAATGTAGCCAGTCCTACTGAAATGTCCCTAGGGGAGTGCCAAGATTCAAGCCACCTTGATGAAGATCTGATAAGGGGAAAGATACTGGTCTGCAGCTATTCCATACGATTTGTACTTGGCCTGTCGTCTGTGAAGCAAGCTTTAGATACTGCAAAGAATGTCAGTGCTGCAGGAGTTATATTCTATCTGGATCCATTTGTCATTGGATTCCAGCTGAATCCAACTCCAATGGATATGCCTGGACTTATAATACCATCATCTGATGACTCTAAGGTATGACAGCCAAAGCAAGAGTCTTGTTATTACTCATCCCTTGCTGATATGAAGAAAATTAACAAATGTGATGCAACATTCTCAGGTATTTCTAAATTATTACAATGAGTCCCTTGTGAGAGATGAGACCTCAAACAAAATCGTCAGCTTTGGTGCAATTGCAAAAATACTAGGAGGCCAAAATCCAAATTATGGTATTTCTGCCCCAAAAGTAATGTTTTATTCTGCCAGGGGTCCTGATCCTGAGGACAACTCACTGGCCAATGCTGATATCCTGAAGCCAAATCTGATAGCACCTGGCAGTTCCATTTGGGGTGCTTGGAGTTCTCTTGGATTGGACTCTGCTGAATTTGCTGGTAACTTGACAATTTACCTACTTTCTAATCTTGTTTAGAACATAAGTTTTATTCTTTGAATCATCAGGCATATAAAATAGCAATAAAACAAAACAGTGGCATGCATTTTCTGTTTTTTTAACAGTTCTATTAGGTGCTAAAATACCTGTTAATGAGAGAGCTTATGTCTGAATTGAAGATTCAGCCTAATTTTTTCCCCTTCAATAGTACCATGAATCATTTGTAGATTACGGTTGGCATTGATTTGTGCCAACAGTTGTTCTGCATTTTTGTTAGTCCATTCCCTTTACCTCGCTGATAGAGTGATAGAGCAAAATTTTATGTAGAAGTAATCACAGAAAGCGCTACATGATTTCACTCTTTAATTGTGCATTTTAACACCTAAGTTTAGGTCATGCTCTAGACATAATGCTTTACAGAAAAGGTTGTATAAAAACTGTTCTAGTTATTGTGGAAGCCCTTAATAAGATGTTCGTTTAGCATTAGAATCCAACCTATAACATCTTCTATTAATAAATTTGCTTATATAATAATTTTTTTCTTACATAGATTAATTGAATAATTATGTTGTTTTTGACTTACTGTCTAGGTGAAAGTTTTGCAATAATTTCCGGTACAAGTATGGCTGCACCACACGTTGCTGGGCTTGCTGCTCTAGTCAAGCAGAAGTTCCCTTATTTTAGCCCTGCAGCTATAGGTTCTGCATTATCGACTACTACAAGTCTCAGTGACAGGGAGGGGAATCCAATCATGGCACAGAGAACATACGGCAATCCAAATTCAACTCAATCTCCAGCTACACCTTTTGACATGGGAAATGGATTTGTCAATGCTACTGCTGCTTTGGATCCTGGGCTCATATTTGATTCCAGTAAGTTCAACTGCCATTTCTTCTGTTTATTTTACTATTATCAGTACCTCTACCTTTGGTAGAGTTCACTGGGGCCTATGTTATACAAACTCCGTTCCAAAATATAAGCATTTTTTCTATGCATTTTTCAAAATGTATCTGATGCTTCTATCTGGAACGGAGGGAGTACCTGATAGTATGAATACAAACTAGCAAGTAGCAACAGCAATATAGCTTGAATGTCATACATGCAATGCAACATTTTTTCTCACTATAAAGTCAGACTGAAATTCTCAGTGTAGTTTAGTAATTATTCAATCCTGACAGCGGCATGACTTTACAGGTTACGACGATTTCTTCTCCTTTCTATGTGGCATAAACGGCTCTGCTCCAGTAGTGATGAATTACACCGGCAACAGCTGCAGCTCCTCCGCCATGACAGGGGCTGATCTGAACCTCCCCTCCATCACCATTGCAGTGCTCAACCGGTCAAGAACGATAACAAGAACTGTAACCAACGTGGCGAGCGACGAGCGCTACACGGTCAGTTACAGCGCCCCTTACGGGGTCGCCGTCTCGGCGTCGCCGGCCCAGTTCTTCATCCCCAGCGGGCAGAGGCAGCAGGTGATCTTCGTCGTCAACGCCACCATGAACGGCACCTCCGCGAGCTTCGGCAGCGTCGGCTTCTACGGCGACAAGGGCCACCGGGTGATGATCCCGTTCTCAGTTATCTCCAAGGTTGTGCACGGTTCATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA004526

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA004526&oldid=42250"