BGIOSGA004600

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Revision as of 11:08, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA004600| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA004600, complete gene.| tag = OsI_040...")
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Gene Name

BGIOSGA004600

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA004600, complete gene.

LocusTag

OsI_04058

Ensembl Transcript ID

BGIOSGA004600-TA

Ensembl Protein ID

BGIOSGA004600-PA

Length

4954

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:37077289..37082242

Sequence Coding Region

37077289..37077606,37079070..37079161,37079290..37079387,37079671..37079826,37079953..37080578
,37080673..37080743,37080834..37081088,37081184..37081301,37081442..37081613
,37081701..37082242

Genome Context

<gbrowseImage1> name=IndicaChromosome01:37077289..37082242 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:37077289..37082242 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCAGTGGAGGCCGGCTCGGCGCGAGAGGCGCGGGCGGCGGAGATGAAGGCCGGCTTGGCGCGAGAGGCGCGGCCGATGGAGGGAGGCCGGAATGGCGCGAGAGGCGCATCCGGTGGAGGAGGCCGGTTTGGCGCGAGTGGCGCGGCCGGCGGTGGAGGAGGCGACCTAGGTGTGAGGAGGAGCTGCCGGTGGGAGTGGCGCGGTCTTCGGCGCACGAAGGCTGGCCGGCGGGGGACGCCGGTGCAGGGGTTCCACATGTCGGCAGAGCTTGTGTGGTGGTGGAGCATCGGTGTATCAGCCGTGGATTCGCAAGTGTTGTACATCGCCTACCTTGGTGAGAAGAAACATGATGATCCTACTCTTGTGACTGGTTCACACCATGACATGCTCAGCAGTATTATTGGAAGTAAGGAGGAGGCCAAGGCTTCCATCACCTACAGCTACAAGCATGGCTTTTCAGGCTTTGCAATAATGTTAACAGAAGACCAAGCTGAGGATCTGGCAGAATTACCTGAAGTTATCAGTATTACTCCAAATCAGAAGCATGAGCTAATGACCACCAGAAGCTGGGATTTCCTCGGGCTTAAAAATGAACCACCCAGTGAGTTTCTGCAAAGGAGCAACTATGGAGAAGACATAATTATTGGGATAATTGACACTGGTATTTGGCCTGAATCAAAAAGCTTCCATGACCACGGATATGATGCAATACCATCACGATGGAAGGGCGTCTGTCAACTAGGAGAGGCCTGGGGGCCCTCCAATTGCAGCAGGAAAATCATTGGTGCACGGTACTACGCGGCTGGCCTTGACAAAGCCAACTTCAAGAAGAATTACATGTCTGCCCGGGACAACAATGGCCATGGAACACACACAGCATCCACAGCAGCAGGTGTGGCAGTAGAGGGGGTTAACCTCCATGGCCTAGGAGCTGGGGTAGCACGTGGTGGTGCACCCCGAGCACGGCTTGCAGTTTATAAGGTTGGGTGGGAGGAGGGTGGTGCTGGTGGAGTATACCTCGCTACTGCCGCAGTACTAGCAGCTCTAGATGATGCTATCCATGATGGAGTCGATATCCTGTCCCTCTCACTTGGTGTTGATGAGAATTCATTTGGGGCACTCCATGCAGTCCAGAATGGGATTACTGTTGTTTATGCCGGGGGAAATAGAGGCCCTCGACCTCAAGTCCTTTATAACACAGCTCCTTGGGTCATTACAGTCGCAGCGAGCAAGATTGATCGATCTTTCCCAACTGCCATCACCCTGGGAAACAAGCAAACATTAGTGGGCCAATCACTCTATTACAAGTTAAAGAACGATACAGAGAGCAGATTTGAATCACTTGTAAATGGTGGCAATTGTTCAAGGGAGGCGTTAAATGGCACAAGCATCAATGGAAAAGTTGTTCTATGCATTGAATTAACTTTTGGCCCGATAGGAAGAATTTTCAAAGATGTCTTTGCAGGCGTTATTCAGGGTGGGGCGTCTGGTCTTATCTTCGCTTTTTATACCACGGATGTTCTTTTGAGCACAGAAGATTGCAAGGGGATAGCCTGTGTTTTTGTTGACAATGAGATTGGATATCAAGTTGCAACATACATAGGCAGTGAAAGATTACCCACTGTTAAGATTGAGCCAGCAAGTAGTATTACAGGAAATCAGGTCCCCGCTCCAAAGGTGGCAATATTCTCCTCAAGAGGCCCATCCATCAAATACCCTACAGTTCTTAAGCCTGACATAGCAGCTCCAGGAGTCAACATCTTAGCTGCCAAAGAAGATGCATATGTATTTAACTCAGGGACATCAATGGCAGCCCCACATGTAGCAGGCGTTGTGGCATTGCTTAAGGCTCTACATCCTCATTGGTCTCATGCTGCTCTCAAATCAGCAATTGTCACCACAGCATCAACAAAGGACGAATATGACACGCCGATATTAGCAGAAGCGCTTCCTCGGAAAGTTGCTGACCCTTTCGATTATGGAGGAGGGAACATAAATCCTATTGGAGCTGCTGATCCTGGCCTAATTTATGACATCGATCCAAAGGATTACAACAAATTCTTCGCTTGTCAGATCAAGAAATATGAGATCTGTAACATTACGACATTGCCAGCCTATCACCTGAATCTGCCTTCTATATCTATACCAGACCTAAGGCATCCAATAAACGTACGACGAGCAGTCACTAATGTCGGGGAGGTGGATGCGGTTTACCAATCCTCTATAGAATCCCCCCTTGGAGTGAAGATGACTATCGAACCGCCTGTCCTAGTCTTCAATGCTAGCAAGAAAGTGCATGCCTTCAAGATTTGCATTACACCTCTGTGGAAAGTGCAGGGAGGCTACACATTCGGCAGCCTAACTTGGTACAATGAGCACCACACTGCAAGAATCCCAATTGCTGTCCGGATCACAATTCAAGACTTCTACGCTGATGTTGCTTAG</cdnaseq>

Protein Sequence

<aaseq>MAVEAGSAREARAAEMKAGLAREARPMEGGRNGARGASGGGGRFGASGAAGGGGGDLGVRRSCRWEWRGLRRTKAGRRGTPVQGFHMSAELVWWWSIGVSAVDSQVLYIAYLGEKKHDDPTLVTGSHHDMLSSIIGSKEEAKASITYSYKHGFSGFAIMLTEDQAEDLAELPEVISITPNQKHELMTTRSWDFLGLKNEPPSEFLQRSNYGEDIIIGIIDTGIWPESKSFHDHGYDAIPSRWKGVCQLGEAWGPSNCSRKIIGARYYAAGLDKANFKKNYMSARDNNGHGTHTASTAAGVAVEGVNLHGLGAGVARGGAPRARLAVYKVGWEEGGAGGVYLATAAVLAALDDAIHDGVDILSLSLGVDENSFGALHAVQNGITVVYAGGNRGPRPQVLYNTAPWVITVAASKIDRSFPTAITLGNKQTLVGQSLYYKLKNDTESRFESLVNGGNCSREALNGTSINGKVVLCIELTFGPIGRIFKDVFAGVIQGGASGLIFAFYTTDVLLSTEDCKGIACVFVDNEIGYQVATYIGSERLPTVKIEPASSITGNQVPAPKVAIFSSRGPSIKYPTVLKPDIAAPGVNILAAKEDAYVFNSGTSMAAPHVAGVVALLKALHPHWSHAALKSAIVTTASTKDEYDTPILAEALPRKVADPFDYGGGNINPIGAADPGLIYDIDPKDYNKFFACQIKKYEICNITTLPAYHLNLPSISIPDLRHPINVRRAVTNVGEVDAVYQSSIESPLGVKMTIEPPVLVFNASKKVHAFKICITPLWKVQGGYTFGSLTWYNEHHTARIPIAVRITIQDFYADVA</aaseq>

Gene Sequence

<dnaseqindica>1..318#1782..1873#2002..2099#2383..2538#2665..3290#3385..3455#3546..3800#3896..4013#4154..4325#4413..4954#ATGGCAGTGGAGGCCGGCTCGGCGCGAGAGGCGCGGGCGGCGGAGATGAAGGCCGGCTTGGCGCGAGAGGCGCGGCCGATGGAGGGAGGCCGGAATGGCGCGAGAGGCGCATCCGGTGGAGGAGGCCGGTTTGGCGCGAGTGGCGCGGCCGGCGGTGGAGGAGGCGACCTAGGTGTGAGGAGGAGCTGCCGGTGGGAGTGGCGCGGTCTTCGGCGCACGAAGGCTGGCCGGCGGGGGACGCCGGTGCAGGGGTTCCACATGTCGGCAGAGCTTGTGTGGTGGTGGAGCATCGGTGTATCAGCCGTGGATTCGCAAGTGGTGAGCGGCGGGTGAAAACCTAGTCTGGCCTCGGCCGGACCGACAACGATGCCTGAGGGCGTTGTCGTGCTGTCTCACCCCTCAAGGGTGGTTGCCGGGCGAAAGCGCAGTCTTGGCTCCTTTGAGCTTCGACGGATGGCGGCGGCGGTTTTCTGTCGCTTCTCTTCTTGAAGACGTCGTCTTGGCATCCCCTAGGGGGGTGATCTCGTCTGTGTCCCTTTGTTGGTCTAGTGGCGGTCGGTCACGCTTAGCGGCGGCCGTTCTAGTGCTAGCCTTCTCCTGGGTTGGTGTGTTGGTGATGTCGATGTGTGGGTGGTGGTTTTTTTTTCCTTTTTCCTGGTTACGACCCTCCAGGGTTGTAATCTTGTAATTTTTTCCTGCTCTATCAATAGAACTTCGCACCGTCTCGTGCGAGTCGTTCAAAAAAAAAAAAAAACAGACGGATGATCAACCTTTCATCCTACCAATCTACCATCGAGAAGTATCATCACTCAAGAAGTTCATTCAAGGTTCAATTTATCCTCTTCTACTTCTCTTCCAAGAAAACAGATTGTGCTCCACTTGATTAACGCCTACTATTCCTTGGATTCGACTAGTCAAACTGTGGGTCATGACTCCATACAATGATGTCTAACAAATGCCAAGGAAAAAAATGATGACACATAAGCATGATAGTATCTTGCAAGAAAATCCCTGCTGATTGGAACGTTTTGACTAACTGTTTGGAAGAAATGCCAGATGATGTAACTGGGCGCAGAAATTTGCTCACACCAAGTGATTACACTCACTAACTGTTTGGAAAAAATCCCTGCTCGTCAGTGAGCTGATAGCTTCTTACTCTTATCCTGAAATATAGAGAAATATAAATCAGATATGTGGAGAGGAACATACAAATCAGAAATATACAGATTTTAGGCCATTGTTCACTGCACAGCACGGCAATACACGTCTTTATCCTCTCAACGTATAAATCAGAAATATAGAGATTCTAGGCCATAATTCTTATGCTGCAAGATAAGCTGGGGTTGGAACAGTGGTACAAACCCATGCTTCAGCCGCAAGGCATACCAGTTAAACTGGAATGAGGAAACTAGCCGCAATGCGTAACATTATATCCAAAATCTTGCACTGTGATTGACAATGAAGTTTTTTGAATTCATCGAACAGGACCTAGCTCTGCCCTTTCTTTCTGAAATAAATAATGCATTCTAGCTTGACAGCTAAAGATATTGGGTAATGGACTATAAATAACACCACCTACTGAAACGAACTAGTAATCACAACATGGCTTTTCACTTCTCTTCTCGACTGTTTTCATCTTGCCTCCTATTTAGCTTTTGCCTGATGTTAATAAGAGCACATGGATCTCGCAGAGTATGGATGACACACTGAACTGCATTTCATTTCATAAAACTGATCCTGTTGGAATGCTAAAAATGTTTTATGTGACTCTCTAAATGTAGTTGTACATCGCCTACCTTGGTGAGAAGAAACATGATGATCCTACTCTTGTGACTGGTTCACACCATGACATGCTCAGCAGTATTATTGGAAGGTAACCTCAGAATTTCTTCTTTTGGCTTTCGAGTTTGTTTCTAGAGATTTCTTTTCTTTGAACCACTTGATTTAACAATATCAAATATCTCTATAATTGGTTATGATAATTTACTAATTGAATTTCAGTAAGGAGGAGGCCAAGGCTTCCATCACCTACAGCTACAAGCATGGCTTTTCAGGCTTTGCAATAATGTTAACAGAAGACCAAGCTGAGGATCTGGCAGGTAGGCGGATTTTTAACTGACCTTTATTTGTAAATAGTTCATGTTAAAAGCCTTTTGCTATCAGTTAAGATAGATGACTAGAGGATTCAGTTCCGATGTATTCCTAGCATTGAATGGTAAAAAGAAATGGCATGTTCACTAATGTGCTTATCAATTTACCATTGCAAACTGCTTTCACTATCAGAAACTGCCTCTGTAAAGCAAATGCGTTCTCCCCCAAAAAGAAATGGCATGTTTATTAATGTGCTTTATTTTTTGAGATGCTTTTTTTTTTCATGTTCAGAATTACCTGAAGTTATCAGTATTACTCCAAATCAGAAGCATGAGCTAATGACCACCAGAAGCTGGGATTTCCTCGGGCTTAAAAATGAACCACCCAGTGAGTTTCTGCAAAGGAGCAACTATGGAGAAGACATAATTATTGGGATAATTGACACTGGTAAGTCCATCATTTTAATGGAATCAATTGTAAAAATCTTGACCTACAGAATTCTTCCAAAATTCCTCATGCATGAACATGTACATGGATGTACATTAAGTAGGACAACACATACTATTGATGCAGGTATTTGGCCTGAATCAAAAAGCTTCCATGACCACGGATATGATGCAATACCATCACGATGGAAGGGCGTCTGTCAACTAGGAGAGGCCTGGGGGCCCTCCAATTGCAGCAGGAAAATCATTGGTGCACGGTACTACGCGGCTGGCCTTGACAAAGCCAACTTCAAGAAGAATTACATGTCTGCCCGGGACAACAATGGCCATGGAACACACACAGCATCCACAGCAGCAGGTGTGGCAGTAGAGGGGGTTAACCTCCATGGCCTAGGAGCTGGGGTAGCACGTGGTGGTGCACCCCGAGCACGGCTTGCAGTTTATAAGGTTGGGTGGGAGGAGGGTGGTGCTGGTGGAGTATACCTCGCTACTGCCGCAGTACTAGCAGCTCTAGATGATGCTATCCATGATGGAGTCGATATCCTGTCCCTCTCACTTGGTGTTGATGAGAATTCATTTGGGGCACTCCATGCAGTCCAGAATGGGATTACTGTTGTTTATGCCGGGGGAAATAGAGGCCCTCGACCTCAAGTCCTTTATAACACAGCTCCTTGGGTCATTACAGTCGCAGCGAGCAAGATTGATCGATCTTTCCCAACTGCCATCACCCTGGGAAACAAGCAAACATTAGTGGTACATGAGACTCGTGATCTCTGTTAGAACCTTTGCTCCATGCAATCTTCCTCAAGAATTTACCACTCAAAAGTACATGCTTTTATATTTGCAGGGCCAATCACTCTATTACAAGTTAAAGAACGATACAGAGAGCAGATTTGAATCACTTGTAAATGGTGGCAAGTATGTATAAAGTTAATGCCAGTTTCTGATTAACATCATTTACATACCAACTTATGTTTAGGTGTTGAAGCTTTTTGCCTGTGTCTACAGTTGTTCAAGGGAGGCGTTAAATGGCACAAGCATCAATGGAAAAGTTGTTCTATGCATTGAATTAACTTTTGGCCCGATAGGAAGAATTTTCAAAGATGTCTTTGCAGGCGTTATTCAGGGTGGGGCGTCTGGTCTTATCTTCGCTTTTTATACCACGGATGTTCTTTTGAGCACAGAAGATTGCAAGGGGATAGCCTGTGTTTTTGTTGACAATGAGATTGGATATCAAGTTGCAACATACATAGGCAGTGAAAGGTATGGATAAATATTTAACGACCCACCAAGCTCTAGCTGTATTTTCTCTGTAACTATTTAAACTCCCAAATAATTTTGCTTTATTTTTTATCCAGATTACCCACTGTTAAGATTGAGCCAGCAAGTAGTATTACAGGAAATCAGGTCCCCGCTCCAAAGGTGGCAATATTCTCCTCAAGAGGCCCATCCATCAAATACCCTACAGTTCTTAAGGTACAATCTGAAAGGAAGTACATACTGTTGGTCTTTATTTTAGTTAGGAAAATCTTTAGACAGACATCAGATACCGTGCACCTTAAGATGATTTTATTCCACAGGAGCATTTCCTAACCATATTATATCTGCTTTAACAGCCTGACATAGCAGCTCCAGGAGTCAACATCTTAGCTGCCAAAGAAGATGCATATGTATTTAACTCAGGGACATCAATGGCAGCCCCACATGTAGCAGGCGTTGTGGCATTGCTTAAGGCTCTACATCCTCATTGGTCTCATGCTGCTCTCAAATCAGCAATTGTCACCACAGGTAAATTACTTGAGTGTGCTATCCACATGAAACAACTATATAGGTAAATCCACTCAACCATGAATTACTCTTTTTTGCATGCAAAAGCATCAACAAAGGACGAATATGACACGCCGATATTAGCAGAAGCGCTTCCTCGGAAAGTTGCTGACCCTTTCGATTATGGAGGAGGGAACATAAATCCTATTGGAGCTGCTGATCCTGGCCTAATTTATGACATCGATCCAAAGGATTACAACAAATTCTTCGCTTGTCAGATCAAGAAATATGAGATCTGTAACATTACGACATTGCCAGCCTATCACCTGAATCTGCCTTCTATATCTATACCAGACCTAAGGCATCCAATAAACGTACGACGAGCAGTCACTAATGTCGGGGAGGTGGATGCGGTTTACCAATCCTCTATAGAATCCCCCCTTGGAGTGAAGATGACTATCGAACCGCCTGTCCTAGTCTTCAATGCTAGCAAGAAAGTGCATGCCTTCAAGATTTGCATTACACCTCTGTGGAAAGTGCAGGGAGGCTACACATTCGGCAGCCTAACTTGGTACAATGAGCACCACACTGCAAGAATCCCAATTGCTGTCCGGATCACAATTCAAGACTTCTACGCTGATGTTGCTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA004600