BGIOSGA004601

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Revision as of 11:08, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA004601| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA004601, complete gene.| tag = OsI_040...")
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Gene Name

BGIOSGA004601

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA004601, complete gene.

LocusTag

OsI_04059

Ensembl Transcript ID

BGIOSGA004601-TA

Ensembl Protein ID

BGIOSGA004601-PA

Length

4415

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:37085642..37090056

Sequence Coding Region

37085642..37085734,37085822..37085913,37086077..37086174,37086524..37086637,37087258..37087413
,37087514..37088133,37088475..37088545,37088659..37088913,37089013..37089130
,37089258..37089429,37089515..37090056

Genome Context

<gbrowseImage1> name=IndicaChromosome01:37085642..37090056 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:37085642..37090056 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGATTCTGCACTCTCCATTTCAGCGCTTTCCAGCTTTCCTCCTATTTTGTGTATGGCTTTTGATGATCAGAGGAATATATGGATCTCGCAAGTTGTACATTGCCTATCTGGGCGAGAAGAAATATGATGACCCTACTCTTGTCACTGCCTCACACCATGACATGCTCACCAGCGTTCTTGGAAGCAAGGAAGAGGCGCTGGCCTCCATTGCTTACAGCTACAAACATGGCTTCTCAGGCTTTGCAGCAATGCTAACAGAGGAGCAAGCAGATAATCTTGCAGGATTGAATAGCTACTGCTTTGACCAGCTGCAATTGCTGTTGATGCGGTTACCTGAATCCCATGATGGCGACAGTAGGTCTGACTCCCACACTGACAAATTCAAAGACAACCAAGATTTACCTGAAGTGATCAGTGTTACCCCAAATAAGCAACATGAATTGCTGACCACAAGAAGTTGGGATTTCCTCGGACTGAACTACCAACCACCCAATAAACTTCTGCAGAGGAGCAAATATGGAGAAGATGTAATTATTGGAATGATTGACACTGGTATCTGGCCTGAATCAAGAAGCTTCAGTGATCATGGATACGGACCAATACCATCACGATGGAAGGGCGTGTGTCAACTAGGACAGGCCTGGGGGCCAACCAACTGCAGCAGGAAAATCATTGGTGCACGGTACTATGCTGCAGGTATAGAAAAAGCTGACTTTAAGAAGAATTACATGTCTGCCCGGGACATGATCGGGCATGGAACGCATACAGCATCCATAGCAGCTGGTGCAGTGGTAGATGGAGTCAGCGTCCATGGCCTAGCAACAGGAGTAGCCCGTGGAGGTGCACCCCGAGCACGTCTTGCTGTGTATAAGGTCATATGGAACACAGGGAATAGCCTACAGCTTGCTAGCGCCGGAGTGCTAGCAGCTCTAGATGATGCAATTCATGATGGAGTTGATATCCTGTCCCTCTCAATTCATGCTGATGAGGATTCATTTGGTGCACTCCATGCAGTCCAGAAGGGGATTACCATTGTTTATGCTGGGGGAAACGATGGCCCTCGACCACAAGTTATTTTCAATACAGCTCCTTGGGTTATTACAGCCGCAGCAAGCAAGATCGATCGGTCTTTTCCAACTACCATTACCCTGGGAAACAAGCAAACATTAGTGGGTCAATCATTATATTACAAGTTAAACAACGAATCCAAGAGTGGGTTCCAACCACTTGTAAATGGTGGAGATTGTTCAAAAGGGGCATTGAATGGAACAACAATCAATGGAAGCATTGTTCTGTGCATCGAAATAACTTATGGACCAATACTAAATTTTGTCAATACTGTCTTCGAAAACGTTTTTAGTGGTGGGGCATCTGGTCTTATTTTCGGACTGTATACCACAGATATGCTTTTGCGCACTGAAGATTGCCAAGGCATACCCTGTGTTTTAGTCGATATTGATATTGGGTCTCAAGTTGCAACATACATTGGTAGTCAAAGCATGCCGGTTGCAAAGATTGAACCAGCACATAGTATTACAGGAAAAGAAGTCCTGGCTCCAAAGGTGGCAATATTCTCATCAAGAGGCCCATCCACTAGGTACCCTACAGTTCTTAAGCCAGACATAGCAGCACCAGGGGTCAACATCCTAGCAGCCAAAGAAGATGGATATGCATTTAACTCGGGGACTTCAATGGCAGCCCCACATGTAGCAGGTGTCATAGCATTGCTAAAGGCTCTGCATCCTGATTGGTCTCATGCTGCTCTAAAATCAGCCATTGTTACCTCAGCATCAACCAAGGATGAATATGGCATGCCAATATTAGCGGAAGCTCTACCTCGGAAAGTTGCTGACCCATTCGACTATGGAGGGGGGAACATAAATCCTAATGGAGCTGCAGATCCCGGCCTGATTTACAACATTGATCCAATGGACTACAACAAATTCTTCGCTTGCAAGATCAAAAAACATGAGATCTGCAACATTACAACTTTACCTGCCTATCACCTCAACTTGCCTTCTATATCAATTCCTGAACTAAGGCATCCAATCAAGGTGCGGCGAGCAGTCACAAATGTGGGGGAAGTCGATGCAGTTTATCAATCTGCTATACAGAGCCCCCTAGGAGTCAAGATCGATGTTGAACCTCCAACCCTAGTCTTCAATGCCACAAAGAAAGTGAACACCTTCAAGGTCAGCATGAGACCCTTGTGGAAAGTGCAAGGGGAATACACATTTGGAAGCCTAACTTGGTACAACGAGCATCACACGGTAAGGATCCCCATCGCAGTCCGGATCACAATCCGAGATTTCTATGCGGATGTTGCATAG</cdnaseq>

Protein Sequence

<aaseq>MILHSPFQRFPAFLLFCVWLLMIRGIYGSRKLYIAYLGEKKYDDPTLVTASHHDMLTSVLGSKEEALASIAYSYKHGFSGFAAMLTEEQADNLAGLNSYCFDQLQLLLMRLPESHDGDSRSDSHTDKFKDNQDLPEVISVTPNKQHELLTTRSWDFLGLNYQPPNKLLQRSKYGEDVIIGMIDTGIWPESRSFSDHGYGPIPSRWKGVCQLGQAWGPTNCSRKIIGARYYAAGIEKADFKKNYMSARDMIGHGTHTASIAAGAVVDGVSVHGLATGVARGGAPRARLAVYKVIWNTGNSLQLASAGVLAALDDAIHDGVDILSLSIHADEDSFGALHAVQKGITIVYAGGNDGPRPQVIFNTAPWVITAAASKIDRSFPTTITLGNKQTLVGQSLYYKLNNESKSGFQPLVNGGDCSKGALNGTTINGSIVLCIEITYGPILNFVNTVFENVFSGGASGLIFGLYTTDMLLRTEDCQGIPCVLVDIDIGSQVATYIGSQSMPVAKIEPAHSITGKEVLAPKVAIFSSRGPSTRYPTVLKPDIAAPGVNILAAKEDGYAFNSGTSMAAPHVAGVIALLKALHPDWSHAALKSAIVTSASTKDEYGMPILAEALPRKVADPFDYGGGNINPNGAADPGLIYNIDPMDYNKFFACKIKKHEICNITTLPAYHLNLPSISIPELRHPIKVRRAVTNVGEVDAVYQSAIQSPLGVKIDVEPPTLVFNATKKVNTFKVSMRPLWKVQGEYTFGSLTWYNEHHTVRIPIAVRITIRDFYADVA</aaseq>

Gene Sequence

<dnaseqindica>1..93#181..272#436..533#883..996#1617..1772#1873..2492#2834..2904#3018..3272#3372..3489#3617..3788#3874..4415#ATGATTCTGCACTCTCCATTTCAGCGCTTTCCAGCTTTCCTCCTATTTTGTGTATGGCTTTTGATGATCAGAGGAATATATGGATCTCGCAAGGTATGCACAGTGCATCACCCTACATCTTATTTCGTATACAGATTTGGTGGTCAAAGATGTTTTCTCTGCTTCTCTATATATGCATAGTTGTACATTGCCTATCTGGGCGAGAAGAAATATGATGACCCTACTCTTGTCACTGCCTCACACCATGACATGCTCACCAGCGTTCTTGGAAGGTAATCTAAGGAGTTTATTTGCTTTGGGGTGTTTTAGTTCTTACCTTCTCAACACCAATATTATTTTATGAGCTGCCTATTTGCTTCAACAACTCCAAACACTTCATTTTATAACTAACTATAATTTCGGTGTTGTTTCTCATGGCTTACCACTTTGTTTCAGCAAGGAAGAGGCGCTGGCCTCCATTGCTTACAGCTACAAACATGGCTTCTCAGGCTTTGCAGCAATGCTAACAGAGGAGCAAGCAGATAATCTTGCAGGTGAACTGAGTTTAGCTAACAAAAGTTAACTTGACTAACTCAGTGCTAAATTTACCAGTCATGTTTGTTATGTGCATGGTATGGGTTTGAGAGTTGAGACCAAGGGTAGGACGCTCACTTCCATCTAACCACCGGCAGAATTCTTCCCAACTGCAGTACAGAAGCTTTGAGGTTTATTGCTGAACTGGGAAGAAGATTAGAGACTTTGTTTATTCTTCCTTGCCTAGTTGTTTTTCACTGTGAACATCTCTTCATAAACAGAGAAGTATAAAGATAAGGAAAGCAACTATCATTGTGAGAATGTAACTAATCAAATCCTAATGACCAAATGATCCTAAAACGTTCCTAGGATTGAATAGCTACTGCTTTGACCAGCTGCAATTGCTGTTGATGCGGTTACCTGAATCCCATGATGGCGACAGTAGGTCTGACTCCCACACTGACAAATTCAAAGACAACCAAGGTGAAGAAATCAATCCTGATGCATGATGCTATTTCTGAATGATAGAAAAAGACACTCAAAACATATTCAACATTGATTAAAAACAGCTCCTTTATGGGAAGGTACCTATGTTAAGCTATTCACTTTCTGCCCAAGAAGAAAAAAACTAACACAACTTAACACCTATATGCCCATGGGAGGGGAATGTGTCCTATACACACAAGCCTTTACATGTACATACTACTGTACGCACCAACTAATAAATATCACTAAAAATTCTAGAAAACTTTGCACATGTACTTTCAATAGTATTACATCTACGTGTAAAGTCCCATGTTCAAATTCATCCTACATAGAGACTAGAAGCAACACAAAATACAAAATTCTGACAGACTTATAGTCTTAAAACTGCCAGAATTTTTTTTTCGTTATGGCTAAAATACAATGAATTTGAGGTTAATATTTTACACGTGTGTAAAGTATATGCACAAATTTTGCTAGATTTTTCAGTGACATTTGTTAGTTGGCGTGTACGGAGTGTGCAAAGGATACGTTCCCCTATTGGAGCACTATATATATATGGTTCTTCTCCTTATTTATTTATACAGAAGAATTTCTCATGTATACTTTTTTATGTTCAGATTTACCTGAAGTGATCAGTGTTACCCCAAATAAGCAACATGAATTGCTGACCACAAGAAGTTGGGATTTCCTCGGACTGAACTACCAACCACCCAATAAACTTCTGCAGAGGAGCAAATATGGAGAAGATGTAATTATTGGAATGATTGACACTGGTTAGTACAATATCACCAAATCATCTGAAAAGACCTTGGCCATACAAATTCTTGCAAAATCCTTAATGTGTAAATTGGAAAACATATGCAATTGATGCAGGTATCTGGCCTGAATCAAGAAGCTTCAGTGATCATGGATACGGACCAATACCATCACGATGGAAGGGCGTGTGTCAACTAGGACAGGCCTGGGGGCCAACCAACTGCAGCAGGAAAATCATTGGTGCACGGTACTATGCTGCAGGTATAGAAAAAGCTGACTTTAAGAAGAATTACATGTCTGCCCGGGACATGATCGGGCATGGAACGCATACAGCATCCATAGCAGCTGGTGCAGTGGTAGATGGAGTCAGCGTCCATGGCCTAGCAACAGGAGTAGCCCGTGGAGGTGCACCCCGAGCACGTCTTGCTGTGTATAAGGTCATATGGAACACAGGGAATAGCCTACAGCTTGCTAGCGCCGGAGTGCTAGCAGCTCTAGATGATGCAATTCATGATGGAGTTGATATCCTGTCCCTCTCAATTCATGCTGATGAGGATTCATTTGGTGCACTCCATGCAGTCCAGAAGGGGATTACCATTGTTTATGCTGGGGGAAACGATGGCCCTCGACCACAAGTTATTTTCAATACAGCTCCTTGGGTTATTACAGCCGCAGCAAGCAAGATCGATCGGTCTTTTCCAACTACCATTACCCTGGGAAACAAGCAAACATTAGTGGTAAATAGTAGAAACACAATCTCTTGGCTCCGTTCGATACTGCATATAGGATATGATTATTGCTTGCACAGGAAACAGGAAAGATGATTAGCATATAATTAATTAACTATTATAAACTTAAAAAGTGGATTTATTTGATTTTTTAAAGAAACTTCTATAAGGAAAACTTTTGCACAAAGCGCACCATTTAACAGTTTGGAAAGCGTGTGCACGAAAATGAGGAAAATTTTCAGCCCACTAGCAGTATCGAACGGAGCGCTCCTAGAGGCACCTTTCCTCGCCTATCATCTCCAAACACTTACCACTCAAAATTTATGTGCAAATCTCTATCATATTTGCAGGGTCAATCATTATATTACAAGTTAAACAACGAATCCAAGAGTGGGTTCCAACCACTTGTAAATGGTGGAGAGTATGTGCATTTCTGTTTAACTTATTGATTAACTAAATTCATGGATAGATGGCAGCTTAGATTCTGATGTTGCATTTCCAAATTGGTTGAGCAACCATTGTTTCTGTCTGCAGTTGTTCAAAAGGGGCATTGAATGGAACAACAATCAATGGAAGCATTGTTCTGTGCATCGAAATAACTTATGGACCAATACTAAATTTTGTCAATACTGTCTTCGAAAACGTTTTTAGTGGTGGGGCATCTGGTCTTATTTTCGGACTGTATACCACAGATATGCTTTTGCGCACTGAAGATTGCCAAGGCATACCCTGTGTTTTAGTCGATATTGATATTGGGTCTCAAGTTGCAACATACATTGGTAGTCAAAGGTAGGAAAAAATTCATGTGAAGAACCAGGCTTAGTAATTGTATTTTCTGTGGAACTATATTTATTTAGTCTAAAATAATATGGTCTTTGTACTAAGCAGCATGCCGGTTGCAAAGATTGAACCAGCACATAGTATTACAGGAAAAGAAGTCCTGGCTCCAAAGGTGGCAATATTCTCATCAAGAGGCCCATCCACTAGGTACCCTACAGTTCTTAAGGTAAACAAAGCTGAAACGGTGCACATTCTTTTGACCTAACCAACTTTGAGTTGCTTGTAATAGTGATCTCAGTAGGCTTGCAATGCTTTACTGCAATGGTATAATCTCATTATAATTACTTTAACAGCCAGACATAGCAGCACCAGGGGTCAACATCCTAGCAGCCAAAGAAGATGGATATGCATTTAACTCGGGGACTTCAATGGCAGCCCCACATGTAGCAGGTGTCATAGCATTGCTAAAGGCTCTGCATCCTGATTGGTCTCATGCTGCTCTAAAATCAGCCATTGTTACCTCAGGTAAGCTATACTATCCACATGAAACACTATGTTTATCAATCCAATAACATGGTCTTACATGTGATTGTCTTTTGCATGGCCAAAGCATCAACCAAGGATGAATATGGCATGCCAATATTAGCGGAAGCTCTACCTCGGAAAGTTGCTGACCCATTCGACTATGGAGGGGGGAACATAAATCCTAATGGAGCTGCAGATCCCGGCCTGATTTACAACATTGATCCAATGGACTACAACAAATTCTTCGCTTGCAAGATCAAAAAACATGAGATCTGCAACATTACAACTTTACCTGCCTATCACCTCAACTTGCCTTCTATATCAATTCCTGAACTAAGGCATCCAATCAAGGTGCGGCGAGCAGTCACAAATGTGGGGGAAGTCGATGCAGTTTATCAATCTGCTATACAGAGCCCCCTAGGAGTCAAGATCGATGTTGAACCTCCAACCCTAGTCTTCAATGCCACAAAGAAAGTGAACACCTTCAAGGTCAGCATGAGACCCTTGTGGAAAGTGCAAGGGGAATACACATTTGGAAGCCTAACTTGGTACAACGAGCATCACACGGTAAGGATCCCCATCGCAGTCCGGATCACAATCCGAGATTTCTATGCGGATGTTGCATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA004601

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA004601&oldid=42325"