BGIOSGA004617

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Revision as of 11:09, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA004617| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA004617, complete gene.| tag = P0691E0...")
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Gene Name

BGIOSGA004617

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA004617, complete gene.

LocusTag

P0691E06.23

Ensembl Transcript ID

BGIOSGA004617-TA

Ensembl Protein ID

BGIOSGA004617-PA

Length

2701

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:37252728..37255428

Sequence Coding Region

37252728..37253364,37253447..37253504,37253597..37253680,37253796..37253931,37255168..37255428

Genome Context

<gbrowseImage1> name=IndicaChromosome01:37252728..37255428 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:37252728..37255428 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTGCAACTCCAACGTGAAGTCCGCCGGCGTCGCTCAGATCGACGGCCGCCCGGTGCTGCAGCCGGCGGGGAACCGCGTGGCGGCGCCTGAAGCTGCCCGGCCGCTCAAGAAGTCCCTGCAGAAGTCGCTCTCCATGCCGGCTTCGCTCGACAATGCTGCGGCCGCGACCACCTGCGCGGCGTCCCCCGAGAACACCCGCGCCGCCGACTTCGCCCGCGCTGCGGCGGCGTCTCTTCTCCCACCACCTACTCCAGCTTCGGTCAGTGCTAAGGCGACGAGGGTGTCTGGAGCCAAGGTGGCTGCCGCCAGGACTGTGGCGGCGGCTGCGGCCATGGGGGGCTTGGACAGGAGCAGGAAGCCCGCCAAGAAGGGCGGCGCCGCCGTGCTGCCGGTGGTGACGTTCGCGGGGCTCGAGGCGTACGAGCCCGCCGGGAGCATCGCGGCGGCGCAGCGGGAGCACGTCGCGATGGCGCAGGCGCAGCGCAAGATGCGGATCGCGCACTACGGCCGCACCGCGTCCTTCTCCCGAGTCGAAGGGAAAGTCAGCGCTACCGCGACGGGTGCCGCCGAGCTCGTCGCCGGTGCCGTCACCGGGCATGACGAGAAGCGATGCAGCTTCATCACTCCATATTCAGACCCCCTGTACGTCGCCTACCACGACGAGGAGTGGGGTGTGCCCGTGCGCGACGACGAGTTGCTGTTCGAGATGCTCACGTTGTCCGGCGTGCAAGTCGGGGCGGACTGGACCTCGATCCTGAAGAGGAGACACGTCTACAGGGAGGCATTCTCCGGTTTCAACGTGGACGCTGTCGCCAAGTACACTGAGAAGCAGATGGCATCGCTAAGCGCCGAGTTCGGCCTGGATTTGGGCACCATCAGAGGCGCCGTCAACAACGCCTGCCGGATTTCCGAGGTGAGGAGGGACTTCGGGTCGTTCAGCAAATACGTGTGGGCGTTCGTAAACAACAAGCCGCTGTCGCCGAGCTACAAATACAGCCGGAAGATCCCGGTGAAGACGTCCAAGTCGGAGTCGATCAGCAAGGACATGGTGCGGCGCGGCTTCCGGTTCGTCGGCCCCACCGTCATCCACTCGTTCATGCAGGCCGTCGGGCTCACCAACGACCACCTCGTGTCATGCCCGCGCCACCGCGTCTGCTCCTCCTCCTCCGCTTAA</cdnaseq>

Protein Sequence

<aaseq>MCNSNVKSAGVAQIDGRPVLQPAGNRVAAPEAARPLKKSLQKSLSMPASLDNAAAATTCAASPENTRAADFARAAAASLLPPPTPASVSAKATRVSGAKVAAARTVAAAAAMGGLDRSRKPAKKGGAAVLPVVTFAGLEAYEPAGSIAAAQREHVAMAQAQRKMRIAHYGRTASFSRVEGKVSATATGAAELVAGAVTGHDEKRCSFITPYSDPLYVAYHDEEWGVPVRDDELLFEMLTLSGVQVGADWTSILKRRHVYREAFSGFNVDAVAKYTEKQMASLSAEFGLDLGTIRGAVNNACRISEVRRDFGSFSKYVWAFVNNKPLSPSYKYSRKIPVKTSKSESISKDMVRRGFRFVGPTVIHSFMQAVGLTNDHLVSCPRHRVCSSSSA</aaseq>

Gene Sequence

<dnaseqindica>1..637#720..777#870..953#1069..1204#2441..2701#ATGTGCAACTCCAACGTGAAGTCCGCCGGCGTCGCTCAGATCGACGGCCGCCCGGTGCTGCAGCCGGCGGGGAACCGCGTGGCGGCGCCTGAAGCTGCCCGGCCGCTCAAGAAGTCCCTGCAGAAGTCGCTCTCCATGCCGGCTTCGCTCGACAATGCTGCGGCCGCGACCACCTGCGCGGCGTCCCCCGAGAACACCCGCGCCGCCGACTTCGCCCGCGCTGCGGCGGCGTCTCTTCTCCCACCACCTACTCCAGCTTCGGTCAGTGCTAAGGCGACGAGGGTGTCTGGAGCCAAGGTGGCTGCCGCCAGGACTGTGGCGGCGGCTGCGGCCATGGGGGGCTTGGACAGGAGCAGGAAGCCCGCCAAGAAGGGCGGCGCCGCCGTGCTGCCGGTGGTGACGTTCGCGGGGCTCGAGGCGTACGAGCCCGCCGGGAGCATCGCGGCGGCGCAGCGGGAGCACGTCGCGATGGCGCAGGCGCAGCGCAAGATGCGGATCGCGCACTACGGCCGCACCGCGTCCTTCTCCCGAGTCGAAGGGAAAGTCAGCGCTACCGCGACGGGTGCCGCCGAGCTCGTCGCCGGTGCCGTCACCGGGCATGACGAGAAGCGATGCAGCTTCATCACTCCATATTCAGGTGCGCACACACGACACCACACAAAACAATTTACACTACTGCGAAATTAACTCTTAACTAATACGCAATCGTTCATGCGCAGACCCCCTGTACGTCGCCTACCACGACGAGGAGTGGGGTGTGCCCGTGCGCGACGACGAGTGAGTTTGCCCTTCTTTTTTTTGCGAATAATACAAGCATCCGATTGCTTTGCAACAGTTCTCCTCACATTTCGTGCCAACTGAAACGACAGGTTGCTGTTCGAGATGCTCACGTTGTCCGGCGTGCAAGTCGGGGCGGACTGGACCTCGATCCTGAAGAGGAGACACGTCTACAGGTTCGAAAACAGAGCAACCCAATCCATACTCTGCTGCTAAAGATGAAGCCATCCGTGTGATACCAGTAGTATATTGGTGCTGATTTTGCGTTGCTGCTTGCTTGATCACAAATAGGGAGGCATTCTCCGGTTTCAACGTGGACGCTGTCGCCAAGTACACTGAGAAGCAGATGGCATCGCTAAGCGCCGAGTTCGGCCTGGATTTGGGCACCATCAGAGGCGCCGTCAACAACGCCTGCCGGATTTCCGAGGTACTGTCACCTGCATCTGCATGCCAAGCTACTAGTACTATCAATTAAGCCCATGATCTTTCTGAACTTGTCCTCAAGCAAGAACGTTTCCATTCCTAGTAATCAGGACATTTGACAATTCTAACAAGCTCGTCGTCCTATTCACTGACGTGCGATGTCCCAAAACTGTATTTTTCTTTAGATAGTTCACATAGAGCCCATACTCCTCAGCTTATTTTTTTGCATTTCCATACTAATGTTTAATTTCCGGTTGATGAATAGACCGGATGAGACAGTACCACAACTTGACAACCGAAACTTTACCAAAAAGAAAAAGGGAGGTCAATGAATGAATGCTTGGGAAAGAAAGGTCAGTTAAGTGAAAGCGAAGCCTAACAGAATCCCTGACAGCTTACGCCCCCTCATGGTAGACAGCTCAATCAGCAGCTGCAGGGCCCTTTAAATGCCACTAGTAATTTGCAGAATCAAAGCAAAGTGCGTGGTAAAGTACAACAAAAAAGGGCGAACACTTCCTAGCTAATTGGCATTTGACACCCAAGAGCTAGCCTGAAAGGCAGAAAGAAGCTACTCCCTCCGGTTGGTTTCATATTAATTAACATTTTAGACAAGATTAAGGTCAAACTTTTACTTTTATAACTTTGACCATCAATAACTTTAAAAATATTTAGTTTAAAGGAACTATAACAACATATATAGATTTGCCTTTTAAAGCACTATAATAAAAGTAAATATGCATTTATTTATTATATATATTATAGTAAAAAAATAAGGTGAAAGATATATTTTGTAGACCGTATTATTGTACAAAACGTCAATTAAAATAAAACCGGAGAGAGTACTAGTACTTGCTGTCAATCTTTTGGCTGAAGCCTTGCTTCGCGCCATCACGAAGGAGACACGGCTAATTAACTGTGCGCAACTGTTCTCTTTCGTGTTTAGTTGGCAAAGGGTTTCTGCACACGATGCATCGCTCTTGCACAGCTAGCGATCCAATATTCGGAGTGCAATCAACTATACCTAGTTTAAGTACGCTTAGTACGTAGCTGACGCCAACTAATCTATCAGTAAGTACACTGACCAGGGATTATCTTATTTTCGTGAGGTTAATTAGGTACGTATATACCTAGTACCTACTCAAATTCTACGTACAAGCAGTAGTTGTTATATATAAGTGTATATGCAGTGGAAGAATGGAGGGAGAATCTAATGGTGTACTTGATATATTCGATGAAACAGGTGAGGAGGGACTTCGGGTCGTTCAGCAAATACGTGTGGGCGTTCGTAAACAACAAGCCGCTGTCGCCGAGCTACAAATACAGCCGGAAGATCCCGGTGAAGACGTCCAAGTCGGAGTCGATCAGCAAGGACATGGTGCGGCGCGGCTTCCGGTTCGTCGGCCCCACCGTCATCCACTCGTTCATGCAGGCCGTCGGGCTCACCAACGACCACCTCGTGTCATGCCCGCGCCACCGCGTCTGCTCCTCCTCCTCCGCTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA004617