Os11g0528700

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Revision as of 09:12, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0528700| Description = Similar to Indole-3-acetic acid-amido synthetase GH3.17 (EC 6.3.2.-) (Auxin- responsive GH3-like protein 17) (AtGH3-17...")
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Gene Name

Os11g0528700

Description

Similar to Indole-3-acetic acid-amido synthetase GH3.17 (EC 6.3.2.-) (Auxin- responsive GH3-like protein 17) (AtGH3-17)

Version

NM_001074537.1 GI:115485722 GeneID:4350632

Length

1561 bp

Definition

Oryza sativa Japonica Group Os11g0528700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:21016365..21017925

Sequence Coding Region

21016365..21017256,21017316..21017417,21017510..21017925

Expression

GEO Profiles:Os11g0528700

Genome Context

<gbrowseImage1> name=NC_008404:21016365..21017925 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:21016365..21017925 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgacgtccacgtcgtctgaaaatgcgcccgaccacgaccacgaccacgacgcctcttcgccggcgccggcgacggcgacggcggcggcgctgccaccgatgatcccggcgtgcgacccgcacgacgggccggcgtgcctggagctcatcgaggtgctgaccacgcgcgccgccgccgtccagcggcgcgtcctcgccgaggtcctcgccatgaacaccggcaccgactacctccgccggtttctcggcgacgaggtcgtcgccgccgccggcggcgaggacgagctcgccgcggcgttcaaggagcgcgtgccggtggtggagtacgaggacgtgaagccgtacatcgagcgcatcgccaacggcgccccgtcgtcgctcatctcctccaagcccatcaccgagctcctcacgagctccggcacgtcaggcgggcagccgaagctgatgccggcgacggaggaggagctcgaccgcaagaccttcctctacaacctcctcgtccccgtcatgaacaagtacgtggaggggctggacgaggggagggggatgtacctgctgttcgtgaagccggagatcacgacggcgtcggggatggtggcgaggccggtgctgacgagctactacaagagccgccacttccggcggcggccggacagcccgtacacgcggtacacgagccccgacgcggcgatcctctgcccggacagccgccagagcatgtacgcgcagctgctctgcggcctcgcccgccgcggcgaggtgctccgcgtcggcgccgtcttcgcctccgccttcctccgcgccgtcaagttcctcgagggccactggcgcgccctctgcgccgacatccgcgccggccgcgccgacccggccgtcgtcaccgacgccgcctgccgcggcgccgtcgacgccgtcctcgccgcccgcgccgaccccgacctcgccgacgccatcgccgccgagtgtggcggcgcgtcgtggcggggcatcgtgcggcggctgtggccgcggaccaagtacatcgacgtgatcgtgacggggtccatggcgcagtacatcccgctgctggagttctacggcggcgggctgccgctggtgtcgacgatgtacgcgtcgtcggagtcctacttcggcatcaacctccggccgctggacccgccggaggaggtggtgtacacgctgctgcccaacatgtgctactacgagttcatcaaggtggagaaggacggcgacggcgagaaggtccgcgacggcgaggtggtggacctcgtcggcgtcgaggtcggcgcctactacgagctcgtcgtcaccaccttcacaggtgagcgcgtgtgcagcccgttcgatttctttcccacctcctgcatgggtttatcaacgccgtccgatcgcaaaatcaacggctga</cdnaseq>

Protein Sequence

<aaseq>MTSTSSENAPDHDHDHDASSPAPATATAAALPPMIPACDPHDGP ACLELIEVLTTRAAAVQRRVLAEVLAMNTGTDYLRRFLGDEVVAAAGGEDELAAAFKE RVPVVEYEDVKPYIERIANGAPSSLISSKPITELLTSSGTSGGQPKLMPATEEELDRK TFLYNLLVPVMNKYVEGLDEGRGMYLLFVKPEITTASGMVARPVLTSYYKSRHFRRRP DSPYTRYTSPDAAILCPDSRQSMYAQLLCGLARRGEVLRVGAVFASAFLRAVKFLEGH WRALCADIRAGRADPAVVTDAACRGAVDAVLAARADPDLADAIAAECGGASWRGIVRR LWPRTKYIDVIVTGSMAQYIPLLEFYGGGLPLVSTMYASSESYFGINLRPLDPPEEVV YTLLPNMCYYEFIKVEKDGDGEKVRDGEVVDLVGVEVGAYYELVVTTFTGERVCSPFD FFPTSCMGLSTPSDRKING</aaseq>

Gene Sequence

<dnaseqindica>670..1561#509..610#1..416#atgacgtccacgtcgtctgaaaatgcgcccgaccacgaccacgaccacgacgcctcttcgccggcgccggcgacggcgacggcggcggcgctgccaccgatgatcccggcgtgcgacccgcacgacgggccggcgtgcctggagctcatcgaggtgctgaccacgcgcgccgccgccgtccagcggcgcgtcctcgccgaggtcctcgccatgaacaccggcaccgactacctccgccggtttctcggcgacgaggtcgtcgccgccgccggcggcgaggacgagctcgccgcggcgttcaaggagcgcgtgccggtggtggagtacgaggacgtgaagccgtacatcgagcgcatcgccaacggcgccccgtcgtcgctcatctcctccaagcccatcaccgagctcctcacgaggtaagctcaagctcgatcgatctcgatctcgccatggctaacctcacaatttgacacaatcactcggtcgatcatggcgatgtgcgccgcagctccggcacgtcaggcgggcagccgaagctgatgccggcgacggaggaggagctcgaccgcaagaccttcctctacaacctcctcgtccccgtcatgaacaagtgagtctctctcgctggcttcgccatcgatcgccatggatgctgacatggaggtgcaggtacgtggaggggctggacgaggggagggggatgtacctgctgttcgtgaagccggagatcacgacggcgtcggggatggtggcgaggccggtgctgacgagctactacaagagccgccacttccggcggcggccggacagcccgtacacgcggtacacgagccccgacgcggcgatcctctgcccggacagccgccagagcatgtacgcgcagctgctctgcggcctcgcccgccgcggcgaggtgctccgcgtcggcgccgtcttcgcctccgccttcctccgcgccgtcaagttcctcgagggccactggcgcgccctctgcgccgacatccgcgccggccgcgccgacccggccgtcgtcaccgacgccgcctgccgcggcgccgtcgacgccgtcctcgccgcccgcgccgaccccgacctcgccgacgccatcgccgccgagtgtggcggcgcgtcgtggcggggcatcgtgcggcggctgtggccgcggaccaagtacatcgacgtgatcgtgacggggtccatggcgcagtacatcccgctgctggagttctacggcggcgggctgccgctggtgtcgacgatgtacgcgtcgtcggagtcctacttcggcatcaacctccggccgctggacccgccggaggaggtggtgtacacgctgctgcccaacatgtgctactacgagttcatcaaggtggagaaggacggcgacggcgagaaggtccgcgacggcgaggtggtggacctcgtcggcgtcgaggtcggcgcctactacgagctcgtcgtcaccaccttcacaggtgagcgcgtgtgcagcccgttcgatttctttcccacctcctgcatgggtttatcaacgccgtccgatcgcaaaatcaacggctga</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0528700, RefSeq:Os11g0528700