BGIOSGA004631

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Revision as of 11:09, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA004631| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA004631, complete gene.| tag = P0003D0...")
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Gene Name

BGIOSGA004631

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA004631, complete gene.

LocusTag

P0003D09.29

Ensembl Transcript ID

BGIOSGA004631-TA

Ensembl Protein ID

BGIOSGA004631-PA

Length

4845

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:37388028..37392872

Sequence Coding Region

37388028..37388216,37389122..37389217,37389312..37389380,37390101..37390205,37390309..37390365
,37390522..37390722,37391372..37391464,37391527..37391626,37391779..37391878
,37392326..37392411,37392763..37392872

Genome Context

<gbrowseImage1> name=IndicaChromosome01:37388028..37392872 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:37388028..37392872 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTTGCTCCACCCACCTCCTGTCCCAGAGCCTCTACCCGCTCAACCGCGCTAACCCGGCAGCCGCGCGCGGGCACCTCCGGTTCCAGGCTTCTCCCAGTGTGAGGCTCGGCTCCGGCACCAGTCGCCGCCGGGCGCTGGGCCTGAGAGTCGCCGCGTCGGCGGAGCAAGGGAGGAGGCAAGTGGAGGTTGAGTATGATCTACAAGCAAAGTTCAACAAGCTAGCGGACCAAATTGACCAGAATGCTGGGATTACACGGCTGAACCTATTCTCACCTTGCAAAATTAATGTGTTCTTGAGGATAACGGGTAAGAGACCAGATGGGTTCCATGACCTGGCTTCTCTGTTTCATGTGATAAGTTTGGGTGATACTATCAAATTCTCATTGTCACCAAGTAAGAGCAAAGATCGCTTGTCAACCAATGTAGCAGGTGTCCCAGTTGATGAAAGCAATTTGATCATCAAGGCACTCAATCTTTACCGCAAGAAAACTGGAACTGACAACTTTTTTTGGATTCATCTTGATAAGAAGGTCCCTACTGGTGCTGGTCTTGGTGGTGGAAGCAGTAATGCTGCAACTGCGCTGTGGGCCGCCAACCAGTTTAGTGGCTGCATTGCTTCAGAAAAGGAGCTTCAGGAGTGGTCTGGAGAGATAGGATCGGATATTCCCTTCTTCTTTTCACAAGGAGCAGCGTATTGTACTGGTAGAGGAGAGATTGTTGAAGATATTCGGAATCCATTGCCAGCGAATTTGCCAATGGTACTAGTAAAGCCACCTGAAGCATGCTCAACAGCTGAAGTTTACAAGCGGCTCAGGTTAGAGCACACAAGTCAAACTGATCCCTTGGTATTGCTCAAGGAAATTACTGAAAATGGGATATCACAGGATGCCTGTGTTAATGATCTAGAACCTCCAGCATTTGACGTGTTGCCATCACTAAAGAGGTTGAAGAAACGTATAATTGCTGCTAACCGGGGAGATTATGATGCTGTTTTTATGTCAGGAAGTGGAAGCACAATTGTTGGGATTGGTTCACCAGATCCGCCTGCATTTGTGTATGATGATGATGACTACAAGGATACTTTTGTGTCAGAGGCCTGCTTCCTCACTCGTAATGAGAACGAGTGGTACAGAGAACCAATCTCATCGAAAATCACTAGCGAGGAAGATTTACCTCCGGAGGTAGCATCAGTTTCTGACTGA</cdnaseq>

Protein Sequence

<aaseq>MACSTHLLSQSLYPLNRANPAAARGHLRFQASPSVRLGSGTSRRRALGLRVAASAEQGRRQVEVEYDLQAKFNKLADQIDQNAGITRLNLFSPCKINVFLRITGKRPDGFHDLASLFHVISLGDTIKFSLSPSKSKDRLSTNVAGVPVDESNLIIKALNLYRKKTGTDNFFWIHLDKKVPTGAGLGGGSSNAATALWAANQFSGCIASEKELQEWSGEIGSDIPFFFSQGAAYCTGRGEIVEDIRNPLPANLPMVLVKPPEACSTAEVYKRLRLEHTSQTDPLVLLKEITENGISQDACVNDLEPPAFDVLPSLKRLKKRIIAANRGDYDAVFMSGSGSTIVGIGSPDPPAFVYDDDDYKDTFVSEACFLTRNENEWYREPISSKITSEEDLPPEVASVSD</aaseq>

Gene Sequence

<dnaseqindica>1..189#1095..1190#1285..1353#2074..2178#2282..2338#2495..2695#3345..3437#3500..3599#3752..3851#4299..4384#4736..4845#ATGGCTTGCTCCACCCACCTCCTGTCCCAGAGCCTCTACCCGCTCAACCGCGCTAACCCGGCAGCCGCGCGCGGGCACCTCCGGTTCCAGGCTTCTCCCAGTGTGAGGCTCGGCTCCGGCACCAGTCGCCGCCGGGCGCTGGGCCTGAGAGTCGCCGCGTCGGCGGAGCAAGGGAGGAGGCAAGTGGAGGTAAGCTGCCGTCGCGTTCGCCCCCATATTACCTGCTTGGATTGGGAGGGATTAATTTCATAATTTGGATTGCAGCGGAGAAGCGCGTAGAATTAGCTTTGATGTTCGTCCGTTTTGGTTTCGTACTAAACTAGAGGAATGCACGGAGGAAGATTTTGAGCTGATGCAAAGCAATCACGCTAAACTCAGAGGCGAATCACCAGCTTGATTTTGAAAACTTCCTACGGGCGAGGGCGAGCTAGAGGTGCCGCGTTCAGCTGTCGCTGAGCCGTCGGTGGCACGAAGGTCCCGTCGCGGGGGACGTTCCCTGCCGATCCTCTCGCTCGACGCCGGAGTCGTCCATCGCTGAATTCCGTCTTGCTCGGGGTTGGCGGTCGGACGTTCGCCGTCGGCGTCATTTCCACCACCAGCCGCGACCACGTTTGGCTTCTTCCGTGCTGCCGCAATCTCTCCCCGCGTGCACTCGATGATAAGAGAGCAAAAGTGCAAAAGTTCCCCTATTTGATTGGAACCAGGGCGCAATGCCGAAGAGCACATGGATATGGATAAGAAGGCTGACTGCCTGCTCTTGGAATCGTCATCTGTTAATTACGTTTTCTCCCTATTCCTGCTATTTCATTGAGTATTTGTGTTTCCAAACCAGGTCTGCACTCGCATTTCCTTTCCATTTCCCGGGTTCCAAATGGATCCAATTTCTTAATGATGACACCCCTTGGTTAGATCATCATACTATAACTTCTGTTGTTCAGTTTGAATCTTACCCATTATGCTCAAATAGCTTCCTTTCTTAATGCTTATCCTTTCTTTATAAATTATGTTTTCTTGGGAGCTTCTAAAAATTCTTCTGAAGTCCTTTTCTTTTCCTGACACAATAAGTATATAGTTTATAATGGTGTGTACTTTAGGTTGAGTATGATCTACAAGCAAAGTTCAACAAGCTAGCGGACCAAATTGACCAGAATGCTGGGATTACACGGCTGAACCTATTCTCACCTTGCAAAGTATGTACCCAGCGATTTTGTTTTAAGAATAGTTTAAAGCTTGATCGTTTCTATTGTGCTTCTGACTCATTTTATATACCTTTTTTTTGTGTAGATTAATGTGTTCTTGAGGATAACGGGTAAGAGACCAGATGGGTTCCATGACCTGGCTTCTCTGTTTCATGTGAGCATTTTACTTGTACCTGCTTTGATATGTCATGCATGAACGTACAAAGGTGTTTTACAGTTCATAATATATCCATTTTTTTCAATGTTCAAAAATAGTTTGCTGGGATAATAGACATTGTTATTATTTGTCCAAGCAAGAGACTATATGCAGCGATCAGGAATTTATGTGATTTAACATGCCAAAGGACAAAATAGAAAACAGAAAAGTATTACTGGTTTACTACATAAAGCAATCACTATAGGAAAAAATATGCAAAAACAATTTCATCTTCTATTTCCTGACATCAACAGACATATGAAACTCCGACCATTCCTCTTTGCAACCTTCCATGGTGTACAACATAAATATAAATATGCTGATTCTGAATGATAAACTAGAGTTGTTAGCGACATTTATATTTAAACCAAGGTGAACTCTTGACTCTTGAGCAATTGCACCTGCTTTGGGCAACAGGAAAAAAAATATACATTAGGAGTTAGGAAAGGGACTTTATGAACTTCCGATCACATGCTGATATGCACCCATTTTGGTTCGTGCAATTTTAAATAAAACTAACTTACAGGGGCCTATGTCGTATTGTCTGCAATTATAGGATGCAATCTAACATATCATTATGTTACAGTGGTTCCTTCCTATTAGTGTGGTCATATACTTATTGTGCTGCATAAATTTGTTTTGATTTCACTTTTAATAATTCTGTTAAGGAAATCTTAGGTGATAAGTTTGGGTGATACTATCAAATTCTCATTGTCACCAAGTAAGAGCAAAGATCGCTTGTCAACCAATGTAGCAGGTGTCCCAGTTGATGAAAGCAATTTGGTATGTGGCTACAGATACTTCTGCCATTCTTCATCTTACTAATAAATGCTCTATATGTATTTCTAGCTGACTAACTTTACTATTCTATTTCATGAATCTGCAGATCATCAAGGCACTCAATCTTTACCGCAAGAAAACTGGAACTGACAACTTTTTTTGGGTAATGCCAATTGCACATTTCTACCAAGGGATTATACATCAATTTTTGCTACTAGTATAAAGTTTTCTCTATCAAAGAGACTGAATTCTGTTCTGTTTATTTTTTTTCTTTGGTATGCTGGGGCTTATCTTTACTTTTCTCTTAATTGAAAAACAGATTCATCTTGATAAGAAGGTCCCTACTGGTGCTGGTCTTGGTGGTGGAAGCAGTAATGCTGCAACTGCGCTGTGGGCCGCCAACCAGTTTAGTGGCTGCATTGCTTCAGAAAAGGAGCTTCAGGAGTGGTCTGGAGAGATAGGATCGGATATTCCCTTCTTCTTTTCACAAGGAGCAGCGTATTGTACTGGTAGAGGAGAGGTATTTCACAAACTGCTTCTAATTGCCGTGAATAGTTTGTAGTTCATTTCAGCATGTACAGTGTTCCCTAATTTGCTCAAGTTGCTGTGTTGGCTGATGTCATGTTCTTATATTGACCTTTCATCTCTGTCTAGCAACCTTGGTAGTACAGTTCAGTTTTCCGAAAGTACAGTACCTCTAGAGTTACAGTCTATATGAATGTATTCTTACTTTTTAGCTTGTTCCATGTTTTTGCCTGTCAACTTAATGAAACTTTTTTTACCAGATTATGAGCAATATGTTGAAATGGTTTGCAATGAAAGCCATCTCATTCTTGACTAGAAACTGCAGTGTTTATTGATTTGTTGGTATCAACTTATTAATGGTTGCCCGCTTAGTTGATTTAGCTGGTCATGCTATTGCAATTGGCTCATTATATGCTAGCGATTGCTTATTTATAAAATTCCCCTTGCTCTATCTGTTCCAAGTATATGGCTATATGCTCTCTTAGAGAGGAATTGTACTAAATTGCTGCTTGAAAAAGTATCTATTAGTTATTAATTTGTTATTTTTGACAACATTGGTATGGAGATGTATATCTTTGATCAATATTGCCTTGCTCCAAAAATGTCTGATCATAATCTCCAACTCTGGACTTAAATGTATGAAGATTGTTGAAGATATTCGGAATCCATTGCCAGCGAATTTGCCAATGGTACTAGTAAAGCCACCTGAAGCATGCTCAACAGCTGAAGTTTACAAGGTAACATATTTTCATAGCATGAATTTTGAAATGAATCATTTACTAAAATACTTGCACTGCAGCGGCTCAGGTTAGAGCACACAAGTCAAACTGATCCCTTGGTATTGCTCAAGGAAATTACTGAAAATGGGATATCACAGGATGCCTGTGTTAATGATCTAGGTATGCAATTTGGTATCAGCAATTGTCGTATGCTAGTTCCGTACCAGAACTTATGTTATATTCAATAATGTTTTTAAAATTACATCCAGTAAGCATCCCCTGAAAAATAACATTCAGTGAAATATGGTACGTGTGCTTGCCATCTTTTCCAGAACCTCCAGCATTTGACGTGTTGCCATCACTAAAGAGGTTGAAGAAACGTATAATTGCTGCTAACCGGGGAGATTATGATGCTGTTTTTATGTCAGGAAGGTAAGGGGGCCACATTTTTCAATCGCTTAAGCTAGTTCATGAATTTATTTATTCTTTTTTCCTTTTCGTTTTTGAAAGCAATCATATCCCAAACATAGCATTCATAGTGAAGCCATTTTCAAAGTGTCTCTGGAGAGCTTCAGTTATGAAATTTTGGTTGTGTAATTTTCATTGATATCTAAAATGTTAAAAGTCAAAAAATGATGTTTAATTAGTCATTATATTATTTTAGAGCTTTAGTTATGAAATTTTGGTTGTGTAATCACCAGTTATATCGAAAATGCCAAAAGTCAAAAAATGATGTTTAATTAATCATTCTACCAATTTAGCATCGTAAGCATATTTAAGGTGGAGGTTATATATTGCATATATCAAGGATATCTATGTTTTATGGAACATTGTTCAATCATAAATTACGTGATATAATATTGTATATGTACCACGCAGTGGAAGCACAATTGTTGGGATTGGTTCACCAGATCCGCCTGCATTTGTGTATGATGATGATGACTACAAGGATACTTTTGTGTCAGGTTTGTTAAGTTCCCCATCACTATATTCATGTTTTCATTTCAGTACTGTGACAAGGTTTTACAATTGCTGAATATATGGCAAAACTAGAGGGTGTGTTTAGATAATGGGAAATGAGGAGTGGGATTGGGATTGGGAAATGAATGAAATGTTTGGATTAAATGGAACGGGGAGAATGAATGGTTAGGATTTAAAGATGCATTTTGGTGGGTGGGAAATCATTTTCCTATCCCATTAGCCAAACACTCCCAGAGTTCTAAAATATAAATAGACACAAGAGAGAGAGAGAGAGAGAGAGAGAGAGTAGCTATCATGGCTGTCATCTTTAACGTTCCATGTTTTTTTTGGTGCAGAGGCCTGCTTCCTCACTCGTAATGAGAACGAGTGGTACAGAGAACCAATCTCATCGAAAATCACTAGCGAGGAAGATTTACCTCCGGAGGTAGCATCAGTTTCTGACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA004631

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA004631&oldid=42355"