Os11g0529500

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Revision as of 09:12, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0529500| Description = Type III polyketide synthase family protein| Version = NM_001074538.2 GI:297611927 GeneID:4350633| Length = 1690 bp|...")
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Gene Name

Os11g0529500

Description

Type III polyketide synthase family protein

Version

NM_001074538.2 GI:297611927 GeneID:4350633

Length

1690 bp

Definition

Oryza sativa Japonica Group Os11g0529500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:21054610..21056299

Sequence Coding Region

21054762..21055837,21056061..21056226

Expression

GEO Profiles:Os11g0529500

Genome Context

<gbrowseImage1> name=NC_008404:21054610..21056299 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:21054610..21056299 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgagcccactgccgacgatggagaccgcgcacgccaccgtgctcgccatcgggacggcgaacccggcgaagtgcgtggcccaggaggagtacgtcgactggtacttccgggtcaccaagagcgaccacctggtcgaccttaaagccaagatgaagaggatgtgtgacaaatcaggcatcaggaagcgccatttgtgcctcacggaggacatgatcgctgcccatccagagctcctcgaccgcgccgccccgtccctcgacgcgcgcctcggcatcgccagggacgccgtgccggagctggccatggccgcggcggcgagggcgatcgccgagtggggccgccccgccgcggacatcacccacctcgtcgtctccaccaacgccggcgcccacgcccccggcgccgacgcgcggctcgcggagctcctcggcctccgcgccaccgtccagcgcaccgtcctctacatgcacggctgctccgccggctgcagcgcgctccgcctcgccaaggacatcgccgagagcaaccgccgcgcgcgcgtgctcgtggcgtgcgcggaggtcttcctcatagcgctcgccgcccccgacgaggcccgcctcgacgccctcgtcgccgcgtcgctgttcggcgatggcgccggtgctgtcatcgtgggcaccgacggcgacgacgacccgggagcccccgtcgaacacccccccatcttccacatgttgtccgcgtcgcagaccaccatagccgggacccaccagagagtctccctgcagctgagcgagcgcggcctcgactacaagatctccggcgaggtgccggcgctggtgcgcgccggcatcgagcggtgcatggaggacgcgctggcgccgctcggcctcgccggctgcggcggcggatggaaccacctcttatgggcgatgcacccgggcggccgcgctatcttggacagctacgaggcgggtctccggctggagcccgggaagctggcggcgagccggcgggtgctgagcgagtacggcaacatgagcggcgccgcgatcatcttcgtcctcgacgagctgcgacgccggcgccggcggcgggatggtggggaagaagaggaggaggagtcggacgagtactgcgagtggggtgccatggttggggtcgggccggggctcaccattgagacgatggtgctgcgtgccagtgccaccggcggccatgtcggcgacgaagtcaagaagtcgactactgcttga</cdnaseq>

Protein Sequence

<aaseq>MASPLPTMETAHATVLAIGTANPAKCVAQEEYVDWYFRVTKSDH LVDLKAKMKRMCDKSGIRKRHLCLTEDMIAAHPELLDRAAPSLDARLGIARDAVPELA MAAAARAIAEWGRPAADITHLVVSTNAGAHAPGADARLAELLGLRATVQRTVLYMHGC SAGCSALRLAKDIAESNRRARVLVACAEVFLIALAAPDEARLDALVAASLFGDGAGAV IVGTDGDDDPGAPVEHPPIFHMLSASQTTIAGTHQRVSLQLSERGLDYKISGEVPALV RAGIERCMEDALAPLGLAGCGGGWNHLLWAMHPGGRAILDSYEAGLRLEPGKLAASRR VLSEYGNMSGAAIIFVLDELRRRRRRRDGGEEEEEESDEYCEWGAMVGVGPGLTIETM VLRASATGGHVGDEVKKSTTA</aaseq>

Gene Sequence

<dnaseqindica>463..1538#74..239#gtgtgcatcctctctcaccttacagtgcttttcgttctcgatctcggcaacgacgacgacgacggcgactgccatggcgagcccactgccgacgatggagaccgcgcacgccaccgtgctcgccatcgggacggcgaacccggcgaagtgcgtggcccaggaggagtacgtcgactggtacttccgggtcaccaagagcgaccacctggtcgaccttaaagccaagatgaagaggatgtgtgagatttcttaaacgatgatatgcttcatcagatgtttttaatttaatgttgagacattagattccttcagtttcaagctattaatccactaaaataacagagaaatactaaaactattaaccttttattaatccttttattttatgttgaaaccgtttctccatcttttaattccttcagtttctctgttaatgttgaaacattttcgcttcattggcaggtgacaaatcaggcatcaggaagcgccatttgtgcctcacggaggacatgatcgctgcccatccagagctcctcgaccgcgccgccccgtccctcgacgcgcgcctcggcatcgccagggacgccgtgccggagctggccatggccgcggcggcgagggcgatcgccgagtggggccgccccgccgcggacatcacccacctcgtcgtctccaccaacgccggcgcccacgcccccggcgccgacgcgcggctcgcggagctcctcggcctccgcgccaccgtccagcgcaccgtcctctacatgcacggctgctccgccggctgcagcgcgctccgcctcgccaaggacatcgccgagagcaaccgccgcgcgcgcgtgctcgtggcgtgcgcggaggtcttcctcatagcgctcgccgcccccgacgaggcccgcctcgacgccctcgtcgccgcgtcgctgttcggcgatggcgccggtgctgtcatcgtgggcaccgacggcgacgacgacccgggagcccccgtcgaacacccccccatcttccacatgttgtccgcgtcgcagaccaccatagccgggacccaccagagagtctccctgcagctgagcgagcgcggcctcgactacaagatctccggcgaggtgccggcgctggtgcgcgccggcatcgagcggtgcatggaggacgcgctggcgccgctcggcctcgccggctgcggcggcggatggaaccacctcttatgggcgatgcacccgggcggccgcgctatcttggacagctacgaggcgggtctccggctggagcccgggaagctggcggcgagccggcgggtgctgagcgagtacggcaacatgagcggcgccgcgatcatcttcgtcctcgacgagctgcgacgccggcgccggcggcgggatggtggggaagaagaggaggaggagtcggacgagtactgcgagtggggtgccatggttggggtcgggccggggctcaccattgagacgatggtgctgcgtgccagtgccaccggcggccatgtcggcgacgaagtcaagaagtcgactactgcttgagcctcgaagctatagctaagctagcgagctcgatccattcgctgctgagcttgaagcgtcttgagtgtgggtgcggtcgtgcagagtatgcaagtaaaaaaaaagacggaaataagatactataaaataatgggaaataactaaatactccc</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0529500, RefSeq:Os11g0529500