BGIOSGA004650

From RiceWiki
Revision as of 11:09, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA004650| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA004650, complete gene.| tag = P0702B0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA004650

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA004650, complete gene.

LocusTag

P0702B09.41-1

Ensembl Transcript ID

BGIOSGA004650-TA

Ensembl Protein ID

BGIOSGA004650-PA

Length

3810

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:37685527..37689336

Sequence Coding Region

37685527..37685616,37685710..37685883,37686551..37686605,37686693..37686962,37687161..37687372
,37687556..37687676,37687954..37688041,37688114..37688192,37688372..37688459
,37688592..37688632,37688760..37688812,37688906..37689062,37689145..37689336

Genome Context

<gbrowseImage1> name=IndicaChromosome01:37685527..37689336 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:37685527..37689336 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGATGCCCTGCCGCCTCCACGGCGACATCCTGCTGCTCCTGCTCGGCGCCGTCGCCGTCGCGGTGGCTCACCCGGCGGCGAACGAGTTCTGCGCGGCCGTCGGTGGAGGAAGCGGTGGCTGCGGCGTCGGCGGCGGCGGCGGAGGGGACGGGAGGAGGATCCTGATCAGGGGCGGGACGGTGGTGAACGCGCACCGGGTGGAGGAGGCCGACGTGTACGTAGAGGACGGCGTGATCGTCGCCGTGCGGCCCAACATCCCGGTTGGTGATGATCATGTAAAAGTGATTGATGCAACTGGAAAATATGTCATGCCAGGTGGAATTGACCCTCACACTCACCTGGAGATGGAATTCATGGGAACTGTAACCATTGATGATTTCTTTAGTGGTCATGCTGCAGCATTGGCTGGTGGGACAACAATGCACATTGACTTCGTCATTCCAGTGAATGGCAATTTAACTGCAGGTTTGGAATCCTACAAGCAGAAGGCAGAAAAATCTGCCATGGATTATGGATTTCATATGGCCATTACAAAGTGGAATGATGATGTTTCGAGGGAAATGGAAACGATGGTTAAGGAACATGGGATCAATTCTTTCAAGTTCTTCATGGCGTATAAAGGTTCATTGATGGTCACGGATGACCTACTCCTGCAAGGCTTACAGAAATGCAAATCTCTTGGTGCCTTGGCTATGGTTCATGCAGAGAATGGGGATGCTGTTGCTGAGGGACAGCAACGAATGATCGATCTTGGGATAACTGGCCCAGAAGGACACGCTCTCTCAAGACCTCCAGTTTTGGAAGGGGAAGCAACTGCTCGGGCAATTCGATTAGCCAAGTTTGTCAATACACCATTGTATGTTGTTCATGTGATGAGCATTGATGCAATGGATGAGATTGCCAAGGCTAAAAGAGAAGGGCAGAGAGTCATTGGTGAACCTGTGGTTTCTGGGCTAGTACTTGATGATTCTTGGCTTTGGGATCCGGACTTCATGATAGCTTCAAAGTATGTAATGAGTCCTCCTATCCGAGAAGCAGGGCATAATAAAGCACTTCAAGCTGCTCTTTCATCAGGAATTTTACAGCTTGTAGGAACTGATCATTGCACCTTCAACTCCACACAGAAAGCTTTCGGCTCTGATGATTTCAGAAAGATTCCTAATGGTGTTAATGGTATTGAGGAAAGGATGCATATTATTTGGGACAGTATGGTGGAGACTGGCCGAATTTCTGTCAGTGATTATGTGAGAGTGACAAGCACAGAATGTGCCAAGATTTTCAACATATACCCTCGGAAAGGAGCAATTCTGGAAGGATCTGATGCAGATATTATCATCCTGAATCCCGAGAGGAGCTTTGTCATGGGTGCCCACACACACCATTCAAGGTCCAACACAAATGTGTACGAGGGCAGGAAAGGAAAGGGAATGGTAGAAGTCACGATCTCAAGAGGGCGAGTTGTGTGGGAGGATGGCATTCTGAACGTTGTTCCCGGTTCAGGAAGATACGTCAGAACACCGCCTTACAGCTACCTGTTTGATGGCATTGAAAAGTCAGACGCTGCCTACAGAGCCTCCCTTCGTGCCCCTGTGAAACGTGGCAAGGCTGCTGCTTAA</cdnaseq>

Protein Sequence

<aaseq>MAMPCRLHGDILLLLLGAVAVAVAHPAANEFCAAVGGGSGGCGVGGGGGGDGRRILIRGGTVVNAHRVEEADVYVEDGVIVAVRPNIPVGDDHVKVIDATGKYVMPGGIDPHTHLEMEFMGTVTIDDFFSGHAAALAGGTTMHIDFVIPVNGNLTAGLESYKQKAEKSAMDYGFHMAITKWNDDVSREMETMVKEHGINSFKFFMAYKGSLMVTDDLLLQGLQKCKSLGALAMVHAENGDAVAEGQQRMIDLGITGPEGHALSRPPVLEGEATARAIRLAKFVNTPLYVVHVMSIDAMDEIAKAKREGQRVIGEPVVSGLVLDDSWLWDPDFMIASKYVMSPPIREAGHNKALQAALSSGILQLVGTDHCTFNSTQKAFGSDDFRKIPNGVNGIEERMHIIWDSMVETGRISVSDYVRVTSTECAKIFNIYPRKGAILEGSDADIIILNPERSFVMGAHTHHSRSNTNVYEGRKGKGMVEVTISRGRVVWEDGILNVVPGSGRYVRTPPYSYLFDGIEKSDAAYRASLRAPVKRGKAAA</aaseq>

Gene Sequence

<dnaseqindica>1..90#184..357#1025..1079#1167..1436#1635..1846#2030..2150#2428..2515#2588..2666#2846..2933#3066..3106#3234..3286#3380..3536#3619..3810#ATGGCGATGCCCTGCCGCCTCCACGGCGACATCCTGCTGCTCCTGCTCGGCGCCGTCGCCGTCGCGGTGGCTCACCCGGCGGCGAACGAGGTGGGGTGCGCTCGGATTTCTCTGTCGCTCGATCGCCAGCGTGTTTGGTTGGTTTGGTTGGTCTGATGTGATTTTGGGTTTTGGACTCTGAAGTTCTGCGCGGCCGTCGGTGGAGGAAGCGGTGGCTGCGGCGTCGGCGGCGGCGGCGGAGGGGACGGGAGGAGGATCCTGATCAGGGGCGGGACGGTGGTGAACGCGCACCGGGTGGAGGAGGCCGACGTGTACGTAGAGGACGGCGTGATCGTCGCCGTGCGGCCCAACATCCCGGTGAGTGTGGCTGCTGATCTCTGAGACTTTGCTCTGGGGTTGGGGAGATTCGGATTGGCTCCTCTTGGGATTCGGACTGCGCATTGACTTGCCGTCTTCAAGACTGCAACAACCAGTGAGCCATCAGTAGAGGCTAGACTGTAGCCATGTTCGTTGATGCCAAATTGCCAAGTGACTCTGGAACTGGCTTATACTCCCTCCGTCCCAAAATATAAAAGATATTTCTATTTCCTAGTAGTTGACCAGATTCGTAATACTCAGAAATATCTATATGTTCATATTCGTGTTACTAGGAAATCTCTCATCCGATTTAGGTTCTTATATTTTGGGACGGATGTAGCATCTTAAGATGAACAGTTTTGTAGTAATAGGTCACTGCAATTTACTATGGTAAATGTAAAAGTAACTGCTATGGTAAATGTAAAACAAAGGTCATGGAGATATGAAGTGACAGTATAAACAGTAAACTGGAAAAAATGAACACAGTTATCTTTCCTTCTTTCTTGAGATGAGTGAGAAGCCATCTGAAACTAGCAATTTTTTTATGGAACTGTGAATTGGGGTCCATAAATAGAGGGAAGTTGTGTTGGAGCAGCTTTTTATCAAACCATGTCCTCTCTTAATGTTTCAACCTTGCTATTGAAAAGTCTCATGTTTTCATATCTAGGTTGGTGATGATCATGTAAAAGTGATTGATGCAACTGGAAAATATGTCATGCCAGGTAAATTCTTACGGTTTTGATAAACATTTTGGAATTAGTTATTACTTGCTCTTCGGGTTTATCATTCTTCTGGCAAATGTCACACAGGTGGAATTGACCCTCACACTCACCTGGAGATGGAATTCATGGGAACTGTAACCATTGATGATTTCTTTAGTGGTCATGCTGCAGCATTGGCTGGTGGGACAACAATGCACATTGACTTCGTCATTCCAGTGAATGGCAATTTAACTGCAGGTTTGGAATCCTACAAGCAGAAGGCAGAAAAATCTGCCATGGATTATGGATTTCATATGGCCATTACAAAGTGGAATGATGATGTTTCGAGGGAAATGGAAACGATGGTTAAGGAACATGGTCAGTACTTTTTGTGCTGTCAGTTATTTTCATCAGAAATAAGAAATTCCATTCTGGTTCATGAAGCAACTCCTATGTTTCAACCTGAAATCAACTTTGCAAATTTCCTGTAGTCTGCAATGTCTATCAGAACATGATGCTTTGGTACTATATTGTATCGTAGTCTAAGTGCCAGAATTTAAATTGCCAACATTTCAGGGATCAATTCTTTCAAGTTCTTCATGGCGTATAAAGGTTCATTGATGGTCACGGATGACCTACTCCTGCAAGGCTTACAGAAATGCAAATCTCTTGGTGCCTTGGCTATGGTTCATGCAGAGAATGGGGATGCTGTTGCTGAGGGACAGCAACGAATGATCGATCTTGGGATAACTGGCCCAGAAGGACACGCTCTCTCAAGACCTCCAGTTGTAATTTCACACTAACTCTTCGCATTTACTGTTATGCCTATTTATCTTGATATGTTGGACAGATCAAGTGTTTTCTTATACAATATTCAAGTCAATTTGGTGAACTAGACACACCATGAAATTTGTGTATTTTCTCTCACAAGGAAGGATAGATACCATTGAGCTGCTTCTTGTTCCCTGCAGTTGGAAGGGGAAGCAACTGCTCGGGCAATTCGATTAGCCAAGTTTGTCAATACACCATTGTATGTTGTTCATGTGATGAGCATTGATGCAATGGATGAGATTGCCAAGGCTAAAAGAGAAGGTCTGCCACGTTACCTTTCAGTTGCAATCAAATTACTCATGCATGCAAGCAAGCCAGAGTTTTTATATGAATGTACATGTTCCTAGAAAGATACATTGTATATGTTCATTTGCACTTTTAAGTAGTCTGGTTTCAAATAACAAGCTGGCCTGGGTCCTGGGAACTGAAAAGTCGCATTGGATTGATCATGCCCCAGATATCTACATTGATATAAATTTGGCAAGATATCTCAATTTGACAAACAAAGCATATATTGATACAAATTCATACTTTGCAGGGCAGAGAGTCATTGGTGAACCTGTGGTTTCTGGGCTAGTACTTGATGATTCTTGGCTTTGGGATCCGGACTTCATGATAGCTTCAAAGTAAATAAAAGCACAAATTTAATGCTTTGTTTATGCAATTGTTGTTTCTTTTATCTCATATCACATTTCTAGGTATGTAATGAGTCCTCCTATCCGAGAAGCAGGGCATAATAAAGCACTTCAAGCTGCTCTTTCATCAGGAATTTTACAGGTGATACTTTTCATACCCTAAGTTTGACATCACGGAGTTACTTTTTCATCTTAGCTAATATTTGGAGGTCAGTTAGCAAATTATAGGGGCGCACTGTTTGCTTGCAGAAACTTATACCTTGCTAAGGGGTAGGAAACTTCACATGGATGACTATCTAACTGCTCTTCATTTCTATGCAGCTTGTAGGAACTGATCATTGCACCTTCAACTCCACACAGAAAGCTTTCGGCTCTGATGATTTCAGAAAGATTCCTAATGGTGTTAATGGTAATCCTTGTGGGTTGTGAATTTCAACGTTGACAAATAAGTATATAAAAGAACTTTTGATTTTATAAGGAATTCGTGTTTGGTTTGAATAAACCCAGCTAAGGCATCCCTCTCTTAAACGCTTGACCCCAGGTATTGAGGAAAGGATGCATATTATTTGGGACAGTATGGTGGTAAGTTGATATTTTGAATGGTGTTTTTAATGGAAAATATTCTACAGTATCAAAAAAAAAAAAGTCAGCAATCCAGTGGTTCCATTTCCAGTATATCTATTATCTGACATTCATACAATGTATGCAGGAGACTGGCCGAATTTCTGTCAGTGATTATGTGAGAGTGACAAGCACAGAATGGTATATTGAAGAAATTCACTAGCTATCATTTTAAACAACAAATTCCCCACTATTCAACGAAGTACAATGATCAAATTACTCAAATCTTTTCAGTGCCAAGATTTTCAACATATACCCTCGGAAAGGAGCAATTCTGGAAGGATCTGATGCAGATATTATCATCCTGAATCCCGAGAGGAGCTTTGTCATGGGTGCCCACACACACCATTCAAGGTCCAACACAAATGTGTACGAGGGCAGGAAAGGAAAGGTCGGTCCCTCATTACTCACAACTGCATTTGCAAAAGCTTGAATTCAACTTATGTTTTCTTTTTCTCTCTCAATCGGTGTAGGGAATGGTAGAAGTCACGATCTCAAGAGGGCGAGTTGTGTGGGAGGATGGCATTCTGAACGTTGTTCCCGGTTCAGGAAGATACGTCAGAACACCGCCTTACAGCTACCTGTTTGATGGCATTGAAAAGTCAGACGCTGCCTACAGAGCCTCCCTTCGTGCCCCTGTGAAACGTGGCAAGGCTGCTGCTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA004650