BGIOSGA004651

From RiceWiki
Revision as of 11:09, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA004651| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA004651, complete gene.| tag = P0468B0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA004651

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA004651, complete gene.

LocusTag

P0468B07.1

Ensembl Transcript ID

BGIOSGA004651-TA

Ensembl Protein ID

BGIOSGA004651-PA

Length

2274

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:37710741..37713014

Sequence Coding Region

37710741..37711370,37711485..37711602,37711718..37711870,37711962..37712077,37712190..37712357
,37712479..37712606,37712701..37712800,37712922..37713014

Genome Context

<gbrowseImage1> name=IndicaChromosome01:37710741..37713014 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:37710741..37713014 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGCAACTGCTGTCCTGGCTCTGGGGATGCGGAGCCCGCCTCCTCCGACGCCTCCACCGGCAACGGCTCGTCCTCCTTCAAGGCCGGCGCGTCGCCGTCGTCGGCGCCCGCGCAGAACAAGCCGCCGGCGCCCATCGGGCCCGTGCTCGGCCGCCCCATGGAGGACGTCCGGAGCATCTACACCATCGGCAAGGAGCTCGGGCGCGGGCAGTTCGGCGTCACCTCCCTGTGCACCCACAAGGCGACGGGGCAGAAGTTCGCGTGCAAGACCATCGCCAAGCGGAAGCTGTCCACCAAGGAGGACGTGGAGGACGTGCGGCGGGAGGTGCAGATCATGTACCACCTCGCCGGGCAGCCCAACGTGGTGGAGCTCAAGGGCGCCTACGAGGACAAGCAGTCCGTCCACCTCGTCATGGAGCTCTGCGCCGGCGGCGAGCTCTTCGACCGGATCATCGCCAAGGGCCACTACACCGAGCGCGCCGCCGCCTCGCTCCTCCGCACCATCGTCGAGATCATCCACACCTGCCACTCCCTCGGCGTCATCCACCGCGACCTCAAGCCCGAGAACTTCCTCCTCCTCAGCAAGGACGAGGACGCCCCTCTCAAGGCCACCGACTTCGGCCTCTCCGTGTTCAAGGACATCGTCGGCAGCGCGTACTACATCGCGCCGGAGGTGCTGAAGCGGAGCTACGGCCCCGAGGCGGACATCTGGAGCGTCGGCGTCATCCTCTACATCCTCCTCTGCGAATCGGAGCATGGCATCTTCAATTCCATCCTGAGAGGGCAGGTGGACTTCACCAGTGACCCATGGCCACGCATTTCAGCTAGCGCCAAGGACCTTGTCAGGAAGATGCTCAACTCCGACCCCAAGAAGAGAATTTCAGCCTACGAAGTCCTCAATCACCCGTGGATCAAGGAAGATGGAGAAGCACCTGACACGCCGCTTGACAACGCTGTCATGAACAGGCTCAAGCAGTTCAGGGCTATGAACCAATTCAAGAAAGCAGCGCTAAGGGTCATTGCTGGATGCTTGTCGGAGGAAGAGATCAGAGGGCTGAAGGAGATGTTCAAGAGCATGGACTCTGACAACAGCGGCACCATTACCGTCGATGAGCTGCGCAAAGGGCTGTCCAAGCAAGGGACCAAGCTCACGGAGGCCGAAGTGCAGCAGCTAATGGAGGCTGCCGACGCGGACGGGAACGGAACCATCGATTACGACGAGTTCATCACAGCGACGATGCACATGAACAGGATGGACAGAGAGGAGCATCTTTACACCGCGTTTCAGTATTTCGACAAGGACAACAGCGGCTGCATTTCGAAGGAGGAGCTCGAGCAAGCGCTGAGGGAGAAAGGTCTTCTCGATGGCAGAGACATCAAAGACATCATATCAGAAGTCGACGCCGATAACGATGGAAGGATAGACTACAGCGAGTTCGCGGCGATGATGCGGAAGGGAAACCCGGAGGCCAATCCCAAGAAGCGACGGGACGTTGTGATATAG</cdnaseq>

Protein Sequence

<aaseq>MGNCCPGSGDAEPASSDASTGNGSSSFKAGASPSSAPAQNKPPAPIGPVLGRPMEDVRSIYTIGKELGRGQFGVTSLCTHKATGQKFACKTIAKRKLSTKEDVEDVRREVQIMYHLAGQPNVVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVEIIHTCHSLGVIHRDLKPENFLLLSKDEDAPLKATDFGLSVFKDIVGSAYYIAPEVLKRSYGPEADIWSVGVILYILLCESEHGIFNSILRGQVDFTSDPWPRISASAKDLVRKMLNSDPKKRISAYEVLNHPWIKEDGEAPDTPLDNAVMNRLKQFRAMNQFKKAALRVIAGCLSEEEIRGLKEMFKSMDSDNSGTITVDELRKGLSKQGTKLTEAEVQQLMEAADADGNGTIDYDEFITATMHMNRMDREEHLYTAFQYFDKDNSGCISKEELEQALREKGLLDGRDIKDIISEVDADNDGRIDYSEFAAMMRKGNPEANPKKRRDVVI</aaseq>

Gene Sequence

<dnaseqindica>1..630#745..862#978..1130#1222..1337#1450..1617#1739..1866#1961..2060#2182..2274#ATGGGCAACTGCTGTCCTGGCTCTGGGGATGCGGAGCCCGCCTCCTCCGACGCCTCCACCGGCAACGGCTCGTCCTCCTTCAAGGCCGGCGCGTCGCCGTCGTCGGCGCCCGCGCAGAACAAGCCGCCGGCGCCCATCGGGCCCGTGCTCGGCCGCCCCATGGAGGACGTCCGGAGCATCTACACCATCGGCAAGGAGCTCGGGCGCGGGCAGTTCGGCGTCACCTCCCTGTGCACCCACAAGGCGACGGGGCAGAAGTTCGCGTGCAAGACCATCGCCAAGCGGAAGCTGTCCACCAAGGAGGACGTGGAGGACGTGCGGCGGGAGGTGCAGATCATGTACCACCTCGCCGGGCAGCCCAACGTGGTGGAGCTCAAGGGCGCCTACGAGGACAAGCAGTCCGTCCACCTCGTCATGGAGCTCTGCGCCGGCGGCGAGCTCTTCGACCGGATCATCGCCAAGGGCCACTACACCGAGCGCGCCGCCGCCTCGCTCCTCCGCACCATCGTCGAGATCATCCACACCTGCCACTCCCTCGGCGTCATCCACCGCGACCTCAAGCCCGAGAACTTCCTCCTCCTCAGCAAGGACGAGGACGCCCCTCTCAAGGCCACCGACTTCGGCCTCTCCGTCTTCTTCAAGCAAGGCACGCACACCTCCATTGAACTCTTTCCTTCCTCTCCTCAATGGCGCATCGACTTGAATTGAATTCATCCGTTGCCGCCATTGTTGATTGCAGGAGAGGTGTTCAAGGACATCGTCGGCAGCGCGTACTACATCGCGCCGGAGGTGCTGAAGCGGAGCTACGGCCCCGAGGCGGACATCTGGAGCGTCGGCGTCATCCTCTACATCCTCCTCTGCGGTGTTCCTCCATTCTGGGCTGGCAAGTCATCTTGATCTTTCCTCCCATCCATTTCGTCGAACACATCAACGGCGATGTGATGGCTGGAGGAGTTAATCGATCTCTCATGTTTCAGAATCGGAGCATGGCATCTTCAATTCCATCCTGAGAGGGCAGGTGGACTTCACCAGTGACCCATGGCCACGCATTTCAGCTAGCGCCAAGGACCTTGTCAGGAAGATGCTCAACTCCGACCCCAAGAAGAGAATTTCAGCCTACGAAGTCCTCAGTACGTGCCTCTTCTGGTTCTCCATTTTGCATCGTTTCATTTGGGATGTTTGAAATTTTAACTAACAATGCAATTTTTGGTTGTTAATTAGATCACCCGTGGATCAAGGAAGATGGAGAAGCACCTGACACGCCGCTTGACAACGCTGTCATGAACAGGCTCAAGCAGTTCAGGGCTATGAACCAATTCAAGAAAGCAGCGCTAAGGGTCTGTGATTTTGTTTCCCCTTTCAGCAACTACACTTCTGATCCACGAACAACCCACCTCAGCTTCTTGTTTCTCACTGAATCCGTTGGACAAAAAAAAAATAAATTAAAAGGTCATTGCTGGATGCTTGTCGGAGGAAGAGATCAGAGGGCTGAAGGAGATGTTCAAGAGCATGGACTCTGACAACAGCGGCACCATTACCGTCGATGAGCTGCGCAAAGGGCTGTCCAAGCAAGGGACCAAGCTCACGGAGGCCGAAGTGCAGCAGCTAATGGAGGCTGTAAGTGTGCACACTCTCTTGGGGGCTTTGGCTTTTCTTTGTATCCGAGTTGTGATCTGCTACATGGTATAGGTGCAATGCTTAATCACTGCAATGTTAAATTTTGCTGCGAAATATTCAGGCCGACGCGGACGGGAACGGAACCATCGATTACGACGAGTTCATCACAGCGACGATGCACATGAACAGGATGGACAGAGAGGAGCATCTTTACACCGCGTTTCAGTATTTCGACAAGGACAACAGCGGGTAACTACTGCAGATTCTCCAAAATTTGATGCAAAAAATTACACAAGAGAGCAGTCAAATTCTTTATTTATGATCTGTGCGTGTACCTCTGCAGCTGCATTTCGAAGGAGGAGCTCGAGCAAGCGCTGAGGGAGAAAGGTCTTCTCGATGGCAGAGACATCAAAGACATCATATCAGAAGTCGACGCCGATAACGTAAAATCGCAGCAGATTCCTTTGCTCTACAAATCATTTCTAACATTCTACAACACGAGTGACAAGGCAATGCCAATGATCAATGTAGAGCTGACTAATTTCGCTGGAATTTTACCTGCAGGATGGAAGGATAGACTACAGCGAGTTCGCGGCGATGATGCGGAAGGGAAACCCGGAGGCCAATCCCAAGAAGCGACGGGACGTTGTGATATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA004651