BGIOSGA004655

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Revision as of 11:09, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA004655| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA004655, complete gene.| tag = P0468B0...")
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Gene Name

BGIOSGA004655

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA004655, complete gene.

LocusTag

P0468B07.23

Ensembl Transcript ID

BGIOSGA004655-TA

Ensembl Protein ID

BGIOSGA004655-PA

Length

3681

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:37790495..37794175

Sequence Coding Region

37790495..37791574,37791665..37791793,37791872..37791940,37792046..37792098,37792819..37792931
,37793075..37793670,37794134..37794175

Genome Context

<gbrowseImage1> name=IndicaChromosome01:37790495..37794175 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:37790495..37794175 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGTTCCTGTCAATACCAATAACCAAGAGGAGGAAGGTTGTAATCCTTCCTCAGGCAATGAGCTTGAACAATTAGAATCAGATTTTTGTGATGAAGCCAATAACATTGAGCTTGCTAAGGCCTTTTGGTATAACAAGAGTGAATTGGAGCAATCAGCAATTCTATCGGTTGAGATTGAGGAATTGGAGATGACTTATTATAGGGGCTGTATACCCCCTTTTGAGCTGCATCAAGTTCCTTTATTATCTGATGCCATCAGCTTCATACAAGACACAAAATCCTGGTTATATTGGGTTTGTCCCAATTGTGAGAGGATGTTTCTAGATTCTGAAGGCTTCTTGTTGCATCTCGAGAATGAACATCTACCACAACTGCCTAGATCTGAGCCAATTATACCTAGGAGAATATCTGACAATGATGTAAGGGGATTAAAAACCTTTAGTTGGCTTCCAGGCAACATGTATATGAGAGGAGGAGTGGATGACACTAATTTTGAAGATACCGAGATAAGGAAAACAATCATGCAGAAGATTCAGGAAGTGGTTTTCAAGCTCATAGATCTAAGGATCCTTTCTGCTGATCTTACAAATAAATTGACCACGTTTTCAAGACTTCGGGTGGGAAGAAGAGCCTATCTGTTGCCCGGTATGTTGAGCATTGCATTTCTAGGTGCAGAAGATCTTGAAATGATCTATAAATTGCTGCATCAGTTGTCGTTAGCCAATACATGGGAACTTGAGCAGAGTCCTGAGTTTGATGAAGATGGGAGTGATTCTTTTGATGCTGTTACTCTCGTTCAAGATACTAACACCCTCTGTCTGGATGTAAGAAAAATCATTTCTAGTACTGATGGTTCTATCATGGAAGATGATGTCTTCAAATGGCTATTCTATACACCCCTGCAAGAAGGGATGCTGTTATCATGGTTGAGCATGAAACAAAAACGTCTTCAACGTGGAGTTCAGATCATATTGCAGATTAAGACTTTCAGGGACACACTAATAGATGCATACAAGAGTAAGCTTGATGATGGAAAGATTTCAGAACAGGAACCTCCTAACTGTTTCCTTACTGAGACTGACTATATTGATGCTAAGATATTGAGGATTGATTCTGAAATTGAGTACATGAAGAAAATGTTGTCAGAAGTCTGTGCATTTGATTACCGTCCTGCCATCATGCCTATTTTGAAGGCCTACATACGGGATAAGTTGAGAAAGGCTTCCTCTTGTGGTGTCTTTGATCAAGATGATAGATATGCAGAATATAACAAGAATTTGGACTCTGTCAATCAATTTCAGATGGACCAGCAAGCTGGGAGAAATCAAAATTTTGTTGATGAAGGCAACAGTTCTAGGACCAAGGTCGAGAAAGCACGGTGCTTTGTTTCAGATCATCAAGCCTCTATTATAGAACAAACGGGAACATGCACAATATCAGAGGAACCAAGTGCTCAGATTGACATCAGCTGCACCTACTGTGGAGAGATAGTTGAGGAAAATTCAACAATTGTGGAGAAAGAGGAGGAGATAGTTGAGGAAAATTCAACAAGTGTGGAGAAAGAGGAGTGGGAAGTGGTCATGGAGGCTATGAAGAGGTTGGTGGCATCTCTGCCTCCAGAGATGGTTCAGTTGCCAGGGACTATGTCAGAAGATCCAGCAAGCAAGATTGCCTTTCATATAATACGTGAGCTATCTTTTCGCCAGGCTATTAAAAGTGTGAATGGGCAAAGAATGGACACCAAGGCTGTGGATACTGGTGCAGGTGCTCTTGGAATTGCCAAGCCAGCATCAGACGAAAAGGTCAATGCAGCATCAGACAAAAAGGGCAATTCTGGAAGGCCCAAGAGGAGGATGCTTAAGAGCTTGATATGGGCTCTGCTCTCATCATTTGCTAGCCACCTGTCAATGCTACTGCTATCCAGATACTTGTTTGGAGGTGAAGAGGGAAAGGAATCAAAAGATTGCTGTCACATAACTAGAGAGAAGAAAAACAGAGAGTTCAAAAGGTGGCTTGTCATTAAAATAATTGCTCCGTTTTCAAAGCATACTCATTTTGCATTGAAGTTTCAGAACTAA</cdnaseq>

Protein Sequence

<aaseq>MAVPVNTNNQEEEGCNPSSGNELEQLESDFCDEANNIELAKAFWYNKSELEQSAILSVEIEELEMTYYRGCIPPFELHQVPLLSDAISFIQDTKSWLYWVCPNCERMFLDSEGFLLHLENEHLPQLPRSEPIIPRRISDNDVRGLKTFSWLPGNMYMRGGVDDTNFEDTEIRKTIMQKIQEVVFKLIDLRILSADLTNKLTTFSRLRVGRRAYLLPGMLSIAFLGAEDLEMIYKLLHQLSLANTWELEQSPEFDEDGSDSFDAVTLVQDTNTLCLDVRKIISSTDGSIMEDDVFKWLFYTPLQEGMLLSWLSMKQKRLQRGVQIILQIKTFRDTLIDAYKSKLDDGKISEQEPPNCFLTETDYIDAKILRIDSEIEYMKKMLSEVCAFDYRPAIMPILKAYIRDKLRKASSCGVFDQDDRYAEYNKNLDSVNQFQMDQQAGRNQNFVDEGNSSRTKVEKARCFVSDHQASIIEQTGTCTISEEPSAQIDISCTYCGEIVEENSTIVEKEEEIVEENSTSVEKEEWEVVMEAMKRLVASLPPEMVQLPGTMSEDPASKIAFHIIRELSFRQAIKSVNGQRMDTKAVDTGAGALGIAKPASDEKVNAASDKKGNSGRPKRRMLKSLIWALLSSFASHLSMLLLSRYLFGGEEGKESKDCCHITREKKNREFKRWLVIKIIAPFSKHTHFALKFQN</aaseq>

Gene Sequence

<dnaseqindica>1..1080#1171..1299#1378..1446#1552..1604#2325..2437#2581..3176#3640..3681#ATGGCGGTTCCTGTCAATACCAATAACCAAGAGGAGGAAGGTTGTAATCCTTCCTCAGGCAATGAGCTTGAACAATTAGAATCAGATTTTTGTGATGAAGCCAATAACATTGAGCTTGCTAAGGCCTTTTGGTATAACAAGAGTGAATTGGAGCAATCAGCAATTCTATCGGTTGAGATTGAGGAATTGGAGATGACTTATTATAGGGGCTGTATACCCCCTTTTGAGCTGCATCAAGTTCCTTTATTATCTGATGCCATCAGCTTCATACAAGACACAAAATCCTGGTTATATTGGGTTTGTCCCAATTGTGAGAGGATGTTTCTAGATTCTGAAGGCTTCTTGTTGCATCTCGAGAATGAACATCTACCACAACTGCCTAGATCTGAGCCAATTATACCTAGGAGAATATCTGACAATGATGTAAGGGGATTAAAAACCTTTAGTTGGCTTCCAGGCAACATGTATATGAGAGGAGGAGTGGATGACACTAATTTTGAAGATACCGAGATAAGGAAAACAATCATGCAGAAGATTCAGGAAGTGGTTTTCAAGCTCATAGATCTAAGGATCCTTTCTGCTGATCTTACAAATAAATTGACCACGTTTTCAAGACTTCGGGTGGGAAGAAGAGCCTATCTGTTGCCCGGTATGTTGAGCATTGCATTTCTAGGTGCAGAAGATCTTGAAATGATCTATAAATTGCTGCATCAGTTGTCGTTAGCCAATACATGGGAACTTGAGCAGAGTCCTGAGTTTGATGAAGATGGGAGTGATTCTTTTGATGCTGTTACTCTCGTTCAAGATACTAACACCCTCTGTCTGGATGTAAGAAAAATCATTTCTAGTACTGATGGTTCTATCATGGAAGATGATGTCTTCAAATGGCTATTCTATACACCCCTGCAAGAAGGGATGCTGTTATCATGGTTGAGCATGAAACAAAAACGTCTTCAACGTGGAGTTCAGATCATATTGCAGATTAAGACTTTCAGGGACACACTAATAGATGCATACAAGAGTAAGCTTGATGATGGAAAGATTTCAGAACAGGAACCTCCTAACTGTTTCCTTACTGAGGTCTCATTCTTAGTTTCTTACTTGACCCTTTCTTTTCCTCGAATTCTTGGATTGCAATTAATTTTTAATCTTTTGCCATTGAATTTGCAGACTGACTATATTGATGCTAAGATATTGAGGATTGATTCTGAAATTGAGTACATGAAGAAAATGTTGTCAGAAGTCTGTGCATTTGATTACCGTCCTGCCATCATGCCTATTTTGAAGGCCTACATACGGGTTGGTGTTACATTTCTAATTTTGCTTGAAGTCACATTGATTGTTTTCATCTCCTGATTTCTCATCACTTTTTGGCAGGATAAGTTGAGAAAGGCTTCCTCTTGTGGTGTCTTTGATCAAGATGATAGATATGCAGAATATAACAAGGTGATGCCAGTTAAATCTTGATTCTTCATGGACTAAATGTTCCAGTTCTATTATAGTATTATTCCATGTATTATGATGATCATAACAACATAAATTCCTTTGCAGAATTTGGACTCTGTCAATCAATTTCAGATGGACCAGCAAGCTGGGAGAAATCAGTAAGCATGCTTGATTTTCTCTTAAGTTGCTCCCTTTCCATACTTACATGTAGTAGGATTTTTCTCCTAACTGTGGTGACATGATTGTTATATTTAGCAACTCTGTGTCCTTTTCTTGTGGAACCACATTCATGTTTTTTATGTGTATTGATATACAAGATATAGCAGGCACCCCTTTTATTCTAAATGCTCTTATATAAAGCAGTTCAAGTAATACATGTATGAAATTTGTGCAAAAGGTGGCTTGTAGGTGACCTCAACCTGACCTATTTTCATATCCATGTGATATACCCAACATCTCTGCTATTCCTTTCTTACTGATCTGTTATACAAAATCTCTAGCGCCTTCAAGATGTAACTGCTTGGTACCACCAAAATCTTCAGAAGTTTATTCGTAAGTAAAATAGAAAGGGCACTGGAGTATCTGTAGAATTTTCGTGTAAAGCATCCTCCATTTGTTTGCTAAGATATCTTGACTACCCTGCTGTTGTCATTCGATCAAACCCAGTTCCTTCATCTACCCTAGACTTTTCTGTCACAAAGCTAATGCCTTAACTAACTTTTTGTGAAAAATCTATGATCGTGTTTAGTTCTATCCATAGATTGGTTTGGTCCTTTTAAATAGCATCTCATGTCATCTTTACCCTGCATATTTGAACTATTCCCTTATGATTCAGCTCCTTATTCTGTTGTGCTGTTAATTATCTCCTTGTGTTGCAGAAATTTTGTTGATGAAGGCAACAGTTCTAGGACCAAGGTCGAGAAAGCACGGTGCTTTGTTTCAGATCATCAAGCCTCTATTATAGAACAAACGGGAACATGCACAATATCAGGTGAGTTTCTCTAATCAGGTACCATTTGGCTTTATATGTCATTGATTTATATAATTCTGAAAGCCAAAAAACACGAGCTTGACAGTATCTTGTATCACAGAAATTATGACATTTAGTAATCTCATGCTCCTTTGTTTCGCCAGAGGAACCAAGTGCTCAGATTGACATCAGCTGCACCTACTGTGGAGAGATAGTTGAGGAAAATTCAACAATTGTGGAGAAAGAGGAGGAGATAGTTGAGGAAAATTCAACAAGTGTGGAGAAAGAGGAGTGGGAAGTGGTCATGGAGGCTATGAAGAGGTTGGTGGCATCTCTGCCTCCAGAGATGGTTCAGTTGCCAGGGACTATGTCAGAAGATCCAGCAAGCAAGATTGCCTTTCATATAATACGTGAGCTATCTTTTCGCCAGGCTATTAAAAGTGTGAATGGGCAAAGAATGGACACCAAGGCTGTGGATACTGGTGCAGGTGCTCTTGGAATTGCCAAGCCAGCATCAGACGAAAAGGTCAATGCAGCATCAGACAAAAAGGGCAATTCTGGAAGGCCCAAGAGGAGGATGCTTAAGAGCTTGATATGGGCTCTGCTCTCATCATTTGCTAGCCACCTGTCAATGCTACTGCTATCCAGATACTTGTTTGGAGGTGAAGAGGGAAAGGAATCAAAAGATTGCTGTCACATAACTAGAGAGAAGAAAAACAGAGAGTTCAAAAGGTGGCTTGTCATTAAAATAATTGCTCCGGTGATTTTGTGTAGCTATGTGCATCATTCGGTTCTGTGTTATCGATCCTGAGGACAGACAGGAAGCCTCGGTCTTCAGCAGAAATGGATTCGTCAATTTGATAACGAATTCAATATCAAAGATTTCATTCTTTGGAATTAAGGATTTCCCAGCGACATCACAATATATTACGATATGTGCCCACGCAGTCTCTTTTGTTGCTGATCTCGTGAGTTCCTTATTTCTGTACTTTATGGGAGGATTTGCAGAGCTTGACCCAGCTGATGGATAAATTGTGTAAGTTCAATTCAACTAGCGATACTGAGTGTTTACTTTGCTCCACATAATCTTCCATGTGACCATTTTCATCGTTCTTTCAGTGACACAAGTCATGATCTGTGTGGAATCCAATGTCAAGCTCATTTGAGCGCATTCCTGAAAGTAAGTTTGACTACCTTTTTAACATATTATGATTCCTTTGCAGTTTTCAAAGCATACTCATTTTGCATTGAAGTTTCAGAACTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA004655