BGIOSGA004671

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Revision as of 11:09, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA004671| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA004671, complete gene.| tag = OsI_041...")
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Gene Name

BGIOSGA004671

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA004671, complete gene.

LocusTag

OsI_04170

Ensembl Transcript ID

BGIOSGA004671-TA

Ensembl Protein ID

BGIOSGA004671-PA

Length

4194

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:37938281..37942474

Sequence Coding Region

37938281..37939880,37940134..37940469,37940671..37941459,37941911..37942086,37942418..37942474

Genome Context

<gbrowseImage1> name=IndicaChromosome01:37938281..37942474 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:37938281..37942474 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCCTTGATACAAAACAAGTTGTGCGATGTTTGAAGAAAGTTTTGAAGTCCTCCATTAAAGATGGCTATAGATGTGTTTCTGAACATCCAATCCTTTTGACATTGGGTGTTTTGCTCTATTTATTGTATAGATCTTCACCAGGGTTATTTGCTTTCCTACTTTCTTCTTCTCCTGTAATTATATGTACTACTCTTCTTCTTGGAATCCTACTGAGTTATGGGGAAACAAACCTGCCTGAGGCTGATGAAGATAACAAGATCACTCCAGAGATTTCATCCTTAAAGGTTGGAAATCCTTCCAGTGATTTTCACTTTGAAGCGAGCCAGAGATTACCAGCGCCTGAATTGAGGGAAAATACAACTGGCTACAAAGAGAGGGAAACTAAACAGACGGTTTTTATTAGAGAGAGGGCTAGTGAGCATATTGAGCTGGAAGATAATGTCCCCCTTCTGAGAAGGGTTGAGCATGAATACGATAGATTTGATCGGCATGAAATACCTGCAGCGTTAACGCCATTTCCCTCTATGGTCAATTTTCATCAAGGTTCTAGAGTTGGAAACGACTTGAGCTCTAATCAGGACATCAACTCCAAAGGTTCGTTGTCCATTAAGGATAAGGCTGATGGGCACACTAGCTTCTTTGAAGGTGTTCGGAGTGGTCTGGATGAGAAAGAGGCACCCTTTGGCATTTTTTCGACCAGTAAGAATGTTAATGGACGTGGTGAATTGGAGGAAAATTTGAATCAAGAAACAGTATTTACAGATTCAACAGCTAGCAGAGTGAGAGATATTTCTGAAGAGAAACCAACGGAAGGGGAAGCTGGAACTAGCAAATCAGCTTGTGCCATTTCCACGCATCAGAGTAAAACACTTGATGAACTTAGGATTAATACTAGCAAGGGTTTTGAGGACAATCTACTCGATTCCTCTCTTGGTTCACCATGGGCAAGAGTTGGTAGTGAGGACGGAGTTGGTAGTGATGATGGTTCATCTGGTTTTGACTCTGATCAGGCTGAGAGTTCTTCTCCTGATGCTTCCATGACTGACATTGCACCTATTCTTGATGAGATTGACCCCCTCTTGGGTGCAAGCTCTACTCGTCCTGATACAATTCCAAAGGATGATTCGGACACTGATTCACATGTTTCCTCACAGGATCATCAAACTGATGATGATAGTAATGATGAAACTGACAATAATGATGCTAAAGAGAATGGTGAGGAAAAGAATATAGAACAAGGAAAGGAAGCTGCATTTATTTGGACAGCAGATGATGAAAAAAATCTGATGGATCTTGGATATTCTGAGATGGAAAGAAACCGCAGGTTGGAGCTTTTGATGGCCAGACGAAGATCCAGGAAGAACATAAGGTTTGAAATCGACAATGACTTGATAGGTATTGATAATAATGATGGTGGGAGGGGTGTTGACGACTTGTCTCGCTTCCGTGTACAAGTACCACATATTTCAGTTCCAAGGAGGAATCCGTTTGATCTTCCTTATGATTCAGAAGAAGCGGCAATTCCTGGCTCAGCACCCTCAGTTCTGCATACAAGGAAAAACCCATTCGATCTTCCTCTTGATCAGTCCAATGATGTTGCCGATCAGGAGGACCACAAGGACCTTGATGAAAAAGATTTGCCCAATGAGCATGGGTCTCCAGCTCTGCAGAGACAGGATAGCGACCTTGCGGATGTTGGAAGTGAATGCTCGGATGGCATCAACTCCGTGGATGTTGAATTAGACAACAGTGACATTGATGATCGTGAGATTGCTCTACAACACTTTGTCTTTGAAAGATCACAGGAAAGAGAAGCATATCTTTCCTCAACAAAAGGAAAGGGTCCTGAAGATGATTACCTGCTCAGTTCAGTTGGGAACTCCAAGACACTTCATCCAGTAGCTGACCTGCTTAGCTGGGAAGATGGAAATGGTGAAAGCAGCCTTGGTGTTAACTCTTCCCATAACATGTCAGTTGAATTCTCGGACTGGGTTTCATCCCCCAAGCCAATTGCAGAGCATGATTCAGGACCAGAGAACCTTCAGGAGTTTCTTAATACTGAAGTTGCATCAAGTTCAAAGACAATTGTTCTAGGCGCAAGAAATCCAGCTGAAAATAATGGAAATGTTGATTCCATATCCTATTCAAACAATGAAATGCCTTCAGATAGCTTGGGTCATGGGTCCATGGAGTTCCCATCTGAATTTTGTAATGAATCACTGCCAGTAATATCTAGGGACTTGCACCCTATCCCTGAAGAGAGGGTTGTCGAGAACTTCAATGTGCAAGAAAAGCATGAAGCAGTAATATTTACCGATTCAGATGCTGCCTTGACTGGGTTTCATGTAATTGAGGAGCACTTTGAAGTTGGATGTGATGTAAGCCCGAGTTCTGAAGTTGTTCCGTCATGCCTTCAAGCAAGTGATTCCATCCAATCTCGATTAGTTGAGAATAAAGAGGTATCAAATCCATTCATTTCCATCGCTTCTGAAACCAACAAGGTGGATATGATTGATTTGAAGGAAGAAACAGCTGCAGGATATCCACTTGATTCTGATGATGATGCTGATAAAATCTATCCTGAGCCCATGGAGGACAATGTAATTGATGAAAGTTTCCTATCAGAACTGGATGCGGTAGGAGATTTCCGGGTAGAAGCAACAAGATCGGACCAGCAGATGCCTGATGTTGACTCCCATATTGATAATAACACTTCCAATGCGTGCAGAAGAAGATGTGGTATTAGTGGTTGGGTGCTTTACGCTGCTCGCTGGATCTGGAATTATGGATGTTGGGTCGTCCATGAACGCTTGAACAGTGTCACCAGCGGCAGCGATGACGCAAGGATCGGCCAGGTGTCAGGCCATACAGAGATAGGAGTTGTGATACTGCAACAGAGAAGAGAACATGACCCTAGTAATGATCAACAATATAACTCTCCGTCGCTGCAGTAA</cdnaseq>

Protein Sequence

<aaseq>MALDTKQVVRCLKKVLKSSIKDGYRCVSEHPILLTLGVLLYLLYRSSPGLFAFLLSSSPVIICTTLLLGILLSYGETNLPEADEDNKITPEISSLKVGNPSSDFHFEASQRLPAPELRENTTGYKERETKQTVFIRERASEHIELEDNVPLLRRVEHEYDRFDRHEIPAALTPFPSMVNFHQGSRVGNDLSSNQDINSKGSLSIKDKADGHTSFFEGVRSGLDEKEAPFGIFSTSKNVNGRGELEENLNQETVFTDSTASRVRDISEEKPTEGEAGTSKSACAISTHQSKTLDELRINTSKGFEDNLLDSSLGSPWARVGSEDGVGSDDGSSGFDSDQAESSSPDASMTDIAPILDEIDPLLGASSTRPDTIPKDDSDTDSHVSSQDHQTDDDSNDETDNNDAKENGEEKNIEQGKEAAFIWTADDEKNLMDLGYSEMERNRRLELLMARRRSRKNIRFEIDNDLIGIDNNDGGRGVDDLSRFRVQVPHISVPRRNPFDLPYDSEEAAIPGSAPSVLHTRKNPFDLPLDQSNDVADQEDHKDLDEKDLPNEHGSPALQRQDSDLADVGSECSDGINSVDVELDNSDIDDREIALQHFVFERSQEREAYLSSTKGKGPEDDYLLSSVGNSKTLHPVADLLSWEDGNGESSLGVNSSHNMSVEFSDWVSSPKPIAEHDSGPENLQEFLNTEVASSSKTIVLGARNPAENNGNVDSISYSNNEMPSDSLGHGSMEFPSEFCNESLPVISRDLHPIPEERVVENFNVQEKHEAVIFTDSDAALTGFHVIEEHFEVGCDVSPSSEVVPSCLQASDSIQSRLVENKEVSNPFISIASETNKVDMIDLKEETAAGYPLDSDDDADKIYPEPMEDNVIDESFLSELDAVGDFRVEATRSDQQMPDVDSHIDNNTSNACRRRCGISGWVLYAARWIWNYGCWVVHERLNSVTSGSDDARIGQVSGHTEIGVVILQQRREHDPSNDQQYNSPSLQ</aaseq>

Gene Sequence

<dnaseqindica>1..1600#1854..2189#2391..3179#3631..3806#4138..4194#ATGGCCCTTGATACAAAACAAGTTGTGCGATGTTTGAAGAAAGTTTTGAAGTCCTCCATTAAAGATGGCTATAGATGTGTTTCTGAACATCCAATCCTTTTGACATTGGGTGTTTTGCTCTATTTATTGTATAGATCTTCACCAGGGTTATTTGCTTTCCTACTTTCTTCTTCTCCTGTAATTATATGTACTACTCTTCTTCTTGGAATCCTACTGAGTTATGGGGAAACAAACCTGCCTGAGGCTGATGAAGATAACAAGATCACTCCAGAGATTTCATCCTTAAAGGTTGGAAATCCTTCCAGTGATTTTCACTTTGAAGCGAGCCAGAGATTACCAGCGCCTGAATTGAGGGAAAATACAACTGGCTACAAAGAGAGGGAAACTAAACAGACGGTTTTTATTAGAGAGAGGGCTAGTGAGCATATTGAGCTGGAAGATAATGTCCCCCTTCTGAGAAGGGTTGAGCATGAATACGATAGATTTGATCGGCATGAAATACCTGCAGCGTTAACGCCATTTCCCTCTATGGTCAATTTTCATCAAGGTTCTAGAGTTGGAAACGACTTGAGCTCTAATCAGGACATCAACTCCAAAGGTTCGTTGTCCATTAAGGATAAGGCTGATGGGCACACTAGCTTCTTTGAAGGTGTTCGGAGTGGTCTGGATGAGAAAGAGGCACCCTTTGGCATTTTTTCGACCAGTAAGAATGTTAATGGACGTGGTGAATTGGAGGAAAATTTGAATCAAGAAACAGTATTTACAGATTCAACAGCTAGCAGAGTGAGAGATATTTCTGAAGAGAAACCAACGGAAGGGGAAGCTGGAACTAGCAAATCAGCTTGTGCCATTTCCACGCATCAGAGTAAAACACTTGATGAACTTAGGATTAATACTAGCAAGGGTTTTGAGGACAATCTACTCGATTCCTCTCTTGGTTCACCATGGGCAAGAGTTGGTAGTGAGGACGGAGTTGGTAGTGATGATGGTTCATCTGGTTTTGACTCTGATCAGGCTGAGAGTTCTTCTCCTGATGCTTCCATGACTGACATTGCACCTATTCTTGATGAGATTGACCCCCTCTTGGGTGCAAGCTCTACTCGTCCTGATACAATTCCAAAGGATGATTCGGACACTGATTCACATGTTTCCTCACAGGATCATCAAACTGATGATGATAGTAATGATGAAACTGACAATAATGATGCTAAAGAGAATGGTGAGGAAAAGAATATAGAACAAGGAAAGGAAGCTGCATTTATTTGGACAGCAGATGATGAAAAAAATCTGATGGATCTTGGATATTCTGAGATGGAAAGAAACCGCAGGTTGGAGCTTTTGATGGCCAGACGAAGATCCAGGAAGAACATAAGGTTTGAAATCGACAATGACTTGATAGGTATTGATAATAATGATGGTGGGAGGGGTGTTGACGACTTGTCTCGCTTCCGTGTACAAGTACCACATATTTCAGTTCCAAGGAGGAATCCGTTTGATCTTCCTTATGATTCAGAAGAAGCGGCAATTCCTGGCTCAGCACCCTCAGTTCTGCATACAAGGAAAAACCCATTCGATCTTCCTCTTGATCAGTCCAATGATGGTGATGTTTCTGCAGATAATAATGTAAATCCTGGAGAATTAGTGAAAGCTTCTCATCGTGACATGTTCTTCCGAAGGCACGATAGCTTCAACATTGGAAGGACAGATGCTACCCCTGGAGAGATTTTCTAGATTCAAGCCATATTTTGTCCCCGAGACAGTGGAAGGGAGCTTAAGTAATTTCCAAAGACAGTTTAGTGATAAAAGTGAGTCTAAATTGAGTTCTGTTACTGAATCTGATTTGGCCTCTTCAGTTGCCGATCAGGAGGACCACAAGGACCTTGATGAAAAAGATTTGCCCAATGAGCATGGGTCTCCAGCTCTGCAGAGACAGGATAGCGACCTTGCGGATGTTGGAAGTGAATGCTCGGATGGCATCAACTCCGTGGATGTTGAATTAGACAACAGTGACATTGATGATCGTGAGATTGCTCTACAACACTTTGTCTTTGAAAGATCACAGGAAAGAGAAGCATATCTTTCCTCAACAAAAGGAAAGGGTCCTGAAGATGATTACCTGCTCAGTTCAGTTGGGAACTCCAAGACACTTCATCCAGTAGCTGACCTGCTTAGCTGGGAAGATGGAAATGGTAAGAAAATCTGACCTCACAGTTAAACAACTGAATATGTACTTGACAGCTTTATTTGAATCATATTTCTTCAGCTATGTGATGTTATTTTGTAATTTCAGCTTTATGCTGAAACATTTTAATAATGGCATGGCTATGTCCATCTCATGATGTAGAGTCAGGAGTTCTCTTCAATTATCTAAAAACTACCTTCTTGTGCAGGTGAAAGCAGCCTTGGTGTTAACTCTTCCCATAACATGTCAGTTGAATTCTCGGACTGGGTTTCATCCCCCAAGCCAATTGCAGAGCATGATTCAGGACCAGAGAACCTTCAGGAGTTTCTTAATACTGAAGTTGCATCAAGTTCAAAGACAATTGTTCTAGGCGCAAGAAATCCAGCTGAAAATAATGGAAATGTTGATTCCATATCCTATTCAAACAATGAAATGCCTTCAGATAGCTTGGGTCATGGGTCCATGGAGTTCCCATCTGAATTTTGTAATGAATCACTGCCAGTAATATCTAGGGACTTGCACCCTATCCCTGAAGAGAGGGTTGTCGAGAACTTCAATGTGCAAGAAAAGCATGAAGCAGTAATATTTACCGATTCAGATGCTGCCTTGACTGGGTTTCATGTAATTGAGGAGCACTTTGAAGTTGGATGTGATGTAAGCCCGAGTTCTGAAGTTGTTCCGTCATGCCTTCAAGCAAGTGATTCCATCCAATCTCGATTAGTTGAGAATAAAGAGGTATCAAATCCATTCATTTCCATCGCTTCTGAAACCAACAAGGTGGATATGATTGATTTGAAGGAAGAAACAGCTGCAGGATATCCACTTGATTCTGATGATGATGCTGATAAAATCTATCCTGAGCCCATGGAGGACAATGTAATTGATGAAAGTTTCCTATCAGAACTGGATGCGGTAGGAGATTTCCGGGTAGAAGCAACAAGATCGGACCAGCAGATGCCTGATGTTGACTCCCATATTGATAATAACACTTCCAATGGTGTTGCAGAGAGCTCCTTGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTTTAGTTTAGAATGAAAGGAGCAAGATACAAGCTGCTTTTCTGGCTCAAAGCAGGGAGAAAAAAAAAACAGAGAGCAGAAGTATATGTATACTAGTTATATCAGCACACATGTATGCGTGCGACGCGTGACCACCGAGAAGATAGCAACTCACGCGATGTGCGTGCATGCCATGACTTCGCCATGGGGAGGCCAAAGCCACGACGCGCACGACGTCGACGCATCACGCACGCACGGTTCGGTTCGGGCGGCGATCGATCGAGAGGTTTTAGATTGGATTACCTTTATTTCTTCTCTCTGCGGTTGCATTGCATGGAGATGGACCCTCAACCAGCTAGCACACGCAGCTGACACACCCATACACACACACACTCACAGCGTGCAGAAGAAGATGTGGTATTAGTGGTTGGGTGCTTTACGCTGCTCGCTGGATCTGGAATTATGGATGTTGGGTCGTCCATGAACGCTTGAACAGTGTCACCAGCGGCAGCGATGACGCAAGGATCGGCCAGGTGTCAGGCCATACAGAGATAGGAGTTGTGATACTGCAACAGGTAAACTTTTTATTTTTGATAACTCATAAATTTATCGTCAACAGAGTTCAAGGGGAACTACTGCAGCAATTAACGCATGAAACTAGTACAGAGATAGGTCGTCCGTTTTTTTTTTAAGCCGGAGGGAGTACTAGGTGGTGTTCTTTTCTTCTGTACGTAAAGATAAAAATTAATTTTTTTTACATAAAATAAGATGGTATTAACATATAATTGATTGAGTTTTAATTATTACAAACTTGAAAAATACTTTCAAGTTTTCACAGGAAACGCGTCGTTTAACGGTTTGAAAAGCGTGCCACAAAAATCTTAATATTTATTCAACTCTTGTTAGAGAAGAGAACATGACCCTAGTAATGATCAACAATATAACTCTCCGTCGCTGCAGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA004671