BGIOSGA004676

From RiceWiki
Revision as of 11:09, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA004676| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA004676, complete gene.| tag = P0425G0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA004676

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA004676, complete gene.

LocusTag

P0425G02.28

Ensembl Transcript ID

BGIOSGA004676-TA

Ensembl Protein ID

BGIOSGA004676-PA

Length

947

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:37968190..37969136

Sequence Coding Region

37968190..37968223,37968335..37968469,37968925..37969136

Genome Context

<gbrowseImage1> name=IndicaChromosome01:37968190..37969136 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:37968190..37969136 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCAGTCTCTCCTACGTCCTCGCCAAGAACTGGAGAAAAGCAGCGGCAGCATTCGGCAACGAAGCCATCCAGAGGCTCAAGAGAAGATCGCCACCTGCAGAATTGGTCGCAGCTGTAGCGCTCCTCGCTTCAGCGAGATGCTACAGGAAGATCCAGGACAATGCAGACGAGGGGGAGGTGGCGGCCATCAAGCTTGCTCTGCAGAAGGCGGTCTCGTTGTTCGCCAAGAACGATGATATGCAATCGGCTGCCACATGTTGCAAGGAGCTAGCTGAGTTCCACGAGGAACAGAGAGAGTTGCACGCTGCAGTGCATTGCTTCTTACAAGCCAAGGATTATTATGGGAAGCCTTGTCAGCTGCCGCATCCGTCTTCTTGA</cdnaseq>

Protein Sequence

<aaseq>MASLSYVLAKNWRKAAAAFGNEAIQRLKRRSPPAELVAAVALLASARCYRKIQDNADEGEVAAIKLALQKAVSLFAKNDDMQSAATCCKELAEFHEEQRELHAAVHCFLQAKDYYGKPCQLPHPSS</aaseq>

Gene Sequence

<dnaseqindica>1..34#146..280#736..947#ATGGCCAGTCTCTCCTACGTCCTCGCCAAGAACTGTATGTTACTGCTTCAACGTCGATCGATTGGATCGAACATTAATTGATTTGTAACATCATCGATGATTACTTGCCGATCTTCCGTTGATCTGATTTGATTTATATATGCAGGGAGAAAAGCAGCGGCAGCATTCGGCAACGAAGCCATCCAGAGGCTCAAGAGAAGATCGCCACCTGCAGAATTGGTCGCAGCTGTAGCGCTCCTCGCTTCAGCGAGATGCTACAGGAAGATCCAGGACAATGCAGGTCAGTGAATCGTGTCGTGAATTAGTCTCCACTTAGAATTAGCAATGTTAATTATCTGATTAGTTTCCTTCTTAGAACAAGTTTAATAGTGGATATATGCATGTTGATCAGTCGCTAGGCTCCGCTCAGTTTTTTTAAACCAATATTTATAATATAAAAACTACCACCTATAATATTAATATATATATATGTATGTATATATATGTATTTATGGTATAGGTATTGGTTTTTATTTAGAACCGACATCTATAGTTTTTGAAAGGTTTTGGTTCTGTATTTTCGCACCCACAGAAATAGGAAAAACACTATATGTATCGATTTTAACTGTTCCGGTATCTATAGCGTCAACTTCATGTATTTTTTTAGTAGTGATATTATATAGGTTAGCTTTAATATGTGTTAATAGTCAAGTTAGCTAATCTACTATTTACTCATCTGGTGATTAATTAATGCAGACGAGGGGGAGGTGGCGGCCATCAAGCTTGCTCTGCAGAAGGCGGTCTCGTTGTTCGCCAAGAACGATGATATGCAATCGGCTGCCACATGTTGCAAGGAGCTAGCTGAGTTCCACGAGGAACAGAGAGAGTTGCACGCTGCAGTGCATTGCTTCTTACAAGCCAAGGATTATTATGGGAAGCCTTGTCAGCTGCCGCATCCGTCTTCTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA004676