BGIOSGA004730

From RiceWiki
Revision as of 11:10, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA004730| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA004730, complete gene.| tag = B1088C0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA004730

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA004730, complete gene.

LocusTag

B1088C09.16

Ensembl Transcript ID

BGIOSGA004730-TA

Ensembl Protein ID

BGIOSGA004730-PA

Length

4543

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:38845979..38850521

Sequence Coding Region

38845979..38846632,38847236..38847385,38847656..38847926,38848085..38848195,38848814..38848985
,38849217..38849480,38850008..38850202,38850314..38850521

Genome Context

<gbrowseImage1> name=IndicaChromosome01:38845979..38850521 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:38845979..38850521 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCATCTTCTCCGCCCTCTCCTTCCTCTCCGATCGCAAGCGCCCTATCGTTGTTTCCGTCTTCCTCTTCCTCCTCCTCTCATCCCTCTTCCTCCTCTTCAGCCCCGCACCTGCCGCGCTCCCTTTCTTCTCCTTCCCCTCCTCTCACCTCTCCTCCTCCTCCTCCTCTCCTATCGCCGCCACGCCGCCCCCCCTGACTCCAGTTTCCGTCCCCGCCAACGCATCTTCACCGGAGACCCCAGTTGACGCGTCCGGTGGGAGCAACGCTGGCGCCACCGCACCCACCAGGGACGCTCCTCAGCCAGATCGCAGTCGGAGCACGCCCCCTGCCGCCGTCGGAGTGCGTGGATCGGCGGGCACCAACGGAACCAGCAGGGGCGTCTCGGCCGGCGGCGATGGAGCAGGAGCAGCAGCGGCGGCGGCGGCAGGTGTGGCGGTGCCGTCGTGGGAGGTGTGCGAGGTGGGGAAGGGAGTGGTGGCCGCGGACTACATACCGTGCCTGGACAACGTGAAGGCGGTGAAGGCGTTGAAGTCGCTGCGTCACATGGAGCACCGGGAGCGCCACTGCCCGACGGCGCCGAGGCCGAGGTGCCTCGTGCCGCTGCCCACGGGGTACCGGTCACCCTTGCCGTGGCCGCGCAGCCGTGACATGATTTGGTACAATAATGTCCCTCATCCAAAGTTAGTGGAATACAAGAAGGACCAGAACTGGGTTAGGAAGTCTGGCAATTATTTTGTTTTCCCTGGAGGTGGAACTCAATTTAAAGCTGGTGTGACTAAATACATTCGATTTATTCAACAGATCATGCCAAACATTGAATGGGGGACCCATACAAGAACTGTTCTGGATGTTGGATGCGGTGTTGCCAGCTTTGGTGGATACTTGCTTGACAGGAATGTCATTACTATGTCTGTTGCACCCAAAGATGAGCATGAAGCTCAGATACAGTTTGCTCTCGAACGTGGAATTCCAGCATTGTTGGCAGTGATTGGAACACAAAAACTTCCATTCCCTGATAATTCATTTGATGTGATCCATTGTGCAAGGTGTAGGGTCCACTGGTATGCTGATGGTGGAAAACCATTATTAGAGCTTAATAGAGTGCTCAGGCCTGGAGGATACTACATCTGGTCTGCAACTCCTGTATATCGTCGTGGCAAAAGAGATGAAGACGACTGGAATGCGATGGTTACTCTGACCAAGTCAATTTGCTGGAGGACAGTAGTAAAATCTAAGGATGTTAATAGGATTGGTGTTGTTATATATCAGAAGCCAACCTCAAATTCTTGCTACTTTGAGAGAAAACAGAATGAACCACCCCTATGCCCTAGTAGGGAAGGATCACATTCCCCTTGGTATGCACCACTTGATAGTTGCCTCTTGTTACCTGCTGTGTCAAGTTCAGGTGAAGGAAACAGCTGGCCCATTTCCTGGCCAGAAAGGCTTAACATCAAATACTCAACTATATCTGACAACGCTTCTACTCAGTTTTCTCAAGAAAAATTTGATTCTGACACAAAGCACTGGAAGGACCTTGTTTCAGAAGTATATTTCAATGAGTTTGCAGTTAATTGGTCTACCGTTCGCAATGTCATGGATATGAATGCTGGTTTTGGAGGATTTGCGGCATCACTCATCCACAAACCTTTGTGGGTTATGAACGTTGTACCTTTTGATCATCCAGAAGCCTTGCCTATCATTTTCAACAGAGGTTTGATTGGGGTATATCATGACTGGTGTGAATCTTTTAATACATATCCCCGGACCTATGATCTTGTTCACATGAGTTATCTCCTTCAGGGCCTCACAAATAGGTGTGATATCATTGAAGTAGCAGCAGAAATTGATAGGATACTTAGACCTGGAAAATGGTTCGTGTTGCAAGATACTGAGCAAGTGATTAGAAAAATGGATCCAGTTCTTCGCTCTTTGCACTACAGGACTGCAATTGTGAAGCAACAATTTCTTGTCGCTACAAAGGGCTTCTGGCGCCCACACAGTGCAGGTTCTGAGTCAAGATGA</cdnaseq>

Protein Sequence

<aaseq>MAIFSALSFLSDRKRPIVVSVFLFLLLSSLFLLFSPAPAALPFFSFPSSHLSSSSSSPIAATPPPLTPVSVPANASSPETPVDASGGSNAGATAPTRDAPQPDRSRSTPPAAVGVRGSAGTNGTSRGVSAGGDGAGAAAAAAAGVAVPSWEVCEVGKGVVAADYIPCLDNVKAVKALKSLRHMEHRERHCPTAPRPRCLVPLPTGYRSPLPWPRSRDMIWYNNVPHPKLVEYKKDQNWVRKSGNYFVFPGGGTQFKAGVTKYIRFIQQIMPNIEWGTHTRTVLDVGCGVASFGGYLLDRNVITMSVAPKDEHEAQIQFALERGIPALLAVIGTQKLPFPDNSFDVIHCARCRVHWYADGGKPLLELNRVLRPGGYYIWSATPVYRRGKRDEDDWNAMVTLTKSICWRTVVKSKDVNRIGVVIYQKPTSNSCYFERKQNEPPLCPSREGSHSPWYAPLDSCLLLPAVSSSGEGNSWPISWPERLNIKYSTISDNASTQFSQEKFDSDTKHWKDLVSEVYFNEFAVNWSTVRNVMDMNAGFGGFAASLIHKPLWVMNVVPFDHPEALPIIFNRGLIGVYHDWCESFNTYPRTYDLVHMSYLLQGLTNRCDIIEVAAEIDRILRPGKWFVLQDTEQVIRKMDPVLRSLHYRTAIVKQQFLVATKGFWRPHSAGSESR</aaseq>

Gene Sequence

<dnaseqindica>1..654#1258..1407#1678..1948#2107..2217#2836..3007#3239..3502#4030..4224#4336..4543#ATGGCCATCTTCTCCGCCCTCTCCTTCCTCTCCGATCGCAAGCGCCCTATCGTTGTTTCCGTCTTCCTCTTCCTCCTCCTCTCATCCCTCTTCCTCCTCTTCAGCCCCGCACCTGCCGCGCTCCCTTTCTTCTCCTTCCCCTCCTCTCACCTCTCCTCCTCCTCCTCCTCTCCTATCGCCGCCACGCCGCCCCCCCTGACTCCAGTTTCCGTCCCCGCCAACGCATCTTCACCGGAGACCCCAGTTGACGCGTCCGGTGGGAGCAACGCTGGCGCCACCGCACCCACCAGGGACGCTCCTCAGCCAGATCGCAGTCGGAGCACGCCCCCTGCCGCCGTCGGAGTGCGTGGATCGGCGGGCACCAACGGAACCAGCAGGGGCGTCTCGGCCGGCGGCGATGGAGCAGGAGCAGCAGCGGCGGCGGCGGCAGGTGTGGCGGTGCCGTCGTGGGAGGTGTGCGAGGTGGGGAAGGGAGTGGTGGCCGCGGACTACATACCGTGCCTGGACAACGTGAAGGCGGTGAAGGCGTTGAAGTCGCTGCGTCACATGGAGCACCGGGAGCGCCACTGCCCGACGGCGCCGAGGCCGAGGTGCCTCGTGCCGCTGCCCACGGGGTACCGGTCACCCTTGCCGTGGCCGCGCAGCCGTGACATGGTGAGCATGACTGCTTGCCTTCTTCGGTAAGCGAGGAAGCGGTTTTACCTTGTTCATTCCACAATGGTGAAATGGTAGTAATGGTAATTTGATATTGCTAAATCTTGTCCCATAGGAGTACCTGACAAAGAGTTAGTGTTGTGTGCCGTGTGGTTTGGCTGTGCCGTGATCGGTGATACTCAACCCAAACTAGCATGTTTAAGCATCCAAGTAAACAAAGCAAACATTGCAGTTTCTTCAGTATTTTGTTACTAAACTAGCTACTGTTATGAACTTATATGTACAAATGAACCTGGAAACCATAATGGAGAACTCTGTTAGGGTCTTAGGGACGTGGCTTCAATGTCCCCGTCTAATGTATGTTGCCAGGTTGAGAATTGTGCATATCCACTAGGTAGTAGGATTTTTTTTTTTGTCAAATCAGAAAGACCCGTGCATTTTATCTGTGCAACTATCGTCCACAAGATGTTCATCAACTAGAATTCTGTTTTATAAAAGCCAATTGTGGCATCGTCCACAAGATGTTCATCAACTAGAATTCTGTTTTATAAAAGCCAATTGTGGCTATATCTTGTGATGACATATTTCCTCTGCAAATTTCAGATTTGGTACAATAATGTCCCTCATCCAAAGTTAGTGGAATACAAGAAGGACCAGAACTGGGTTAGGAAGTCTGGCAATTATTTTGTTTTCCCTGGAGGTGGAACTCAATTTAAAGCTGGTGTGACTAAATACATTCGATTTATTCAACAGGTATATACTTTAGAAGTTGTTAAGTCGTAGATAAGTTTCATAATATTAAGACAATAAATTTATGCTTGTCTGTGAAACAACTTCACAGCCTAAGTTCAGTGTTTAAGTGGCATATTCCTAAAATTAATATGGATCCTGGTGGTTCAAAAGCAAACATGGACATATATTCCTAGGATAATCATGCAAAGTTAAAATATATTGCTTCAAAGTATCCGATATGATGTTATCCCTTGTTATATTTGTTTACTTCCAGCCTTGTTGATTTAATAGATCATGCCAAACATTGAATGGGGGACCCATACAAGAACTGTTCTGGATGTTGGATGCGGTGTTGCCAGCTTTGGTGGATACTTGCTTGACAGGAATGTCATTACTATGTCTGTTGCACCCAAAGATGAGCATGAAGCTCAGATACAGTTTGCTCTCGAACGTGGAATTCCAGCATTGTTGGCAGTGATTGGAACACAAAAACTTCCATTCCCTGATAATTCATTTGATGTGATCCATTGTGCAAGGTGTAGGGTCCACTGGTATGCTGATGGCAAGTACTTTAAACCATTGTTGATATGTTTATCTTACAATTCTTCACGTTGTTGACTTTTAAATAGGAATGTTCAGTGGGTTCATTTATTATATTTTCTATGTTAAAATGTAATGCGCACTTTTTTAATTATGACTTCACTAACCTGGGGCATACAGGTGGAAAACCATTATTAGAGCTTAATAGAGTGCTCAGGCCTGGAGGATACTACATCTGGTCTGCAACTCCTGTATATCGTCGTGGCAAAAGAGATGAAGACGACTGGAATGGTTAGTAAGATCTATTATGTGTCGTAGTGATTTTTACCATCATAAGTTCTCAAATTACACATTACTATCTCAAACAAATTATGCATCTTTGCGGAACAGATAAATAATTTGTTGCTAAGAAGGTTTCATGCATAGTATTTTATTGTGACCCTATATAATAGCAAGTTCCATGCTGGCTTATATTAAGTAGAATAAAAAAAAGACTGTAAATTTGGTACCTCTGTATAATGAAGGGGTGTGTACTAGAAGGGAAATTACAAAGTCTTGTTAGAACGAGTGAAAGCTTCAGAGGCTTGGCACACTAAGTTCCCAGGCAGTTGAGATAGCATCACATTTTAAGAATATAAAAAGTATCGTCTCAGTTATGTTGACATTTTTAACAATATTGGTGTGTAACACAGTCTGCAGTTAAGAACATGAATTTAACAAATTCATATGATAGTGTTCTCATTATGCGTGTATGATTACAGAATATTTCACTGTTGTTTGACCTGTGATGGGTTTATATATGTTACTACCTGTTACTTTTCCTTAAAGGCACGGATCAATATAGTTTACATATGATTGTAGGGATCAATGTATTCTTGCTAACTGGAGTTTGTGTTCCACTTATTGCAGCGATGGTTACTCTGACCAAGTCAATTTGCTGGAGGACAGTAGTAAAATCTAAGGATGTTAATAGGATTGGTGTTGTTATATATCAGAAGCCAACCTCAAATTCTTGCTACTTTGAGAGAAAACAGAATGAACCACCCCTATGCCCTAGTAGGGAAGGATCACATTCCCCTTGGTACATCTTATTGATGAGTCATTTCCTTTGTTTTATTTCACATACAGTTGAGACTTACACAATTTGTGCAAGTCCTTACATCACTAGTGCATGTTTGGGCTGATTGCTGCATTGATGTAGGCACTTAAGTTTTGTGGCATCTGCTAGTAGTTCTTGCTACTGGTGTCTAAGCTTTGTAGAAGTTTTATTGTACTAGATAAACTAATGTTATTTTTTTGTTGCCCTCTTTAGGTATGCACCACTTGATAGTTGCCTCTTGTTACCTGCTGTGTCAAGTTCAGGTGAAGGAAACAGCTGGCCCATTTCCTGGCCAGAAAGGCTTAACATCAAATACTCAACTATATCTGACAACGCTTCTACTCAGTTTTCTCAAGAAAAATTTGATTCTGACACAAAGCACTGGAAGGACCTTGTTTCAGAAGTATATTTCAATGAGTTTGCAGTTAATTGGTCTACCGTTCGCAATGTCATGGATATGAATGCTGGTTTTGGAGGGTGAGAAAACTTTGATTCTTAATTTTCTTCAATGGGCTTGTTGATATTTCACAAGTTATGACCATGTCTTTCAATGTTTGAATGCTTTGTTTTGATCCCATGAAATTTTCTGTCCTTTGTTTTCCTGAATAGTTAGACTGTTCATTTCGTTTAGTCCGGTTGTTGGTTTTGAGAGTTTATATATTGGTCCCAGTGTTCTAGTGTTCACTATTCCTTATATGGTAGCTTTTCTATTGAAGAGTACATTTCATTTTGTTTAGTGGATTTCAGCAGCCAATCTTTACACGTATAGGCTTGAACTTCTTGAATTTCTGAAATGTCCCAGATTGTAGTCTAATAGTAGCTTGTTGTGTTAAGGATCTATCATTCTATGTAATCTTCAAAAGCAGATGTTCTGTTCACACGATTCCAATAGCTGTTTACAGTATGTTTCAAGGATCCTTCTTTTTCTTATAACGATGAGCAGTCTAGCTATATAGTTTGTTTGATGGTGAGATAAAATTACCTGGTTTTCTTTCTTCTACCAGATTTGCGGCATCACTCATCCACAAACCTTTGTGGGTTATGAACGTTGTACCTTTTGATCATCCAGAAGCCTTGCCTATCATTTTCAACAGAGGTTTGATTGGGGTATATCATGACTGGTGTGAATCTTTTAATACATATCCCCGGACCTATGATCTTGTTCACATGAGTTATCTCCTTCAGGGCCTCACAAATAGGTGAAAAATCATGTCTTGATTCTTTGAGAACTGTTCTGTTTAAATATCATTATTCTCTTCTACCAGCGTACAGAATCAAGCAAGCTTGGTATTAATGCTTTTGTATTTTAGGTGTGATATCATTGAAGTAGCAGCAGAAATTGATAGGATACTTAGACCTGGAAAATGGTTCGTGTTGCAAGATACTGAGCAAGTGATTAGAAAAATGGATCCAGTTCTTCGCTCTTTGCACTACAGGACTGCAATTGTGAAGCAACAATTTCTTGTCGCTACAAAGGGCTTCTGGCGCCCACACAGTGCAGGTTCTGAGTCAAGATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA004730