BGIOSGA004740

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Revision as of 11:10, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA004740| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA004740, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA004740

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA004740, complete gene.

LocusTag

OSJNBA0009E21.17

Ensembl Transcript ID

BGIOSGA004740-TA

Ensembl Protein ID

BGIOSGA004740-PA

Length

5628

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:39033145..39038772

Sequence Coding Region

39033145..39033838,39035830..39035973,39036053..39036205,39036593..39036708,39036821..39036988
,39038299..39038529,39038623..39038772

Genome Context

<gbrowseImage1> name=IndicaChromosome01:39033145..39038772 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:39033145..39038772 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGAACTGCTGCCGCTCGCCGGCCGCCGCGGCGCGGGAGGACGTCAAGTCGTCTCACTTCCCCGCATCGGCCGGGAAGAAGAAGCCCCACCAAGCGCGGAACGGCGGCGTGGGGGGAGGCGGCGGCGGGGGCGGCGGCGGCGGAGGAGGAGGAGGAGCGGGGCAGAAGCGGCTCCCCGTGCTCGGGGAGGAAGGGTGCGAGCTGATCGGAGGGATCGACGACAAGTACGCGCTGGACCGGGAGCTCGGGCGGGGGGAGTTCGGGGTGACGTACCTGTGCATGGATCGGGACACCAAGGAGCTGCTCGCCTGCAAGTCCATCTCCAAGCGGAAGCTGAGGACGGCGGTCGACGTGGAGGACGTGCGCCGGGAGGTCGCCATCATGCGCCACCTCCCCAAGAGCGCCAGCATCGTGTCGCTGCGGGAGGCGTGCGAGGACGAGGGCGCCGTGCACCTCGTCATGGAGCTCTGCGAAGGCGGGGAGCTCTTCGACCGCATCGTCGCGCGGGGCCACTACACGGAGCGCGCCGCCGCCAATGTCACCCGCACCATCGTGGAGGTCGTCCAGCTCTGCCACCGCCACGGCGTTATCCACCGGGACCTCAAGCCCGAGAACTTCCTCTTCGCCAACAAGAAGGAGAACTCGCCGCTCAAGGCCATCGATTTCGGCCTCTCCATCTTCTTCAAGCCCGGTGAGAAGTTTTCTGAAATTGTGGGAAGCCCATATTACATGGCTCCAGAGGTATTGAAGAGAAACTATGGTCCGGAAATAGATATTTGGAGTGCAGGAGTTATCTTGTATATTTTGTTATGTGGAGTTCCTCCATTTTGGGCTGAGACTGAGCAAGGGGTGGCACAAGCCATTCTTCGTGGAAATATCGATTTCAAACGCGAACCCTGGCCAAATGTTTCAGAAAATGCTAAAGATTTGGTTCGACGCATGTTGGAGCCTGATCCAAAACTCAGGTTAACTGCAAAGCAAGTTCTTGAACATCCATGGCTTCAAAATGCTAAGAAAGCTCCAAATGTTCCTCTTGGAGATATTGTGAAGTCAAGGCTCAAACAATTTTCTAGAATGAATAGATTCAAAAGAAGAGCACTAAGGGTCATTGCCGATCATTTATCTGCTGAGGAAGTTGAGGACATAAAGGAGATGTTCAAGGCTATGGACACTGATAACGATGGCATTGTATCTTATGAAGAATTAAAGAGCGGGATAGCAAAATTTGGTTCTCATCTGGCAGAATCGGAAGTGCAGATGCTTATCGAAGCTGTGGATACAAATGGTAAGGGTGCTCTAGATTATGGTGAATTTTTGGCTGTCTCTCTTCATTTGCAAAGGATGGCAAATGATGAGCACCTCCGGCGAGCCTTCCTATTTTTTGACAAGGATGGCAATGGCTACATAGAGCCTGAAGAGCTTCGAGAGGCTCTAGTGGACGATGGAGCAGGTGACAGCATGGAAGTGGTGAACGACATATTGCAAGAAGTTGACACTGATAAGGATGGCAAGATTAGCTATGACGAATTTGTAGCAATGATGAAGACGGGCACAGATTGGAGAAAGGCGTCCCGGCATTACTCTAGAGGAAGATTCAACAGCCTTAGCATGAAGCTTATAAAGGATGGGTCCGTAAAACTGGTCAATGAGTGA</cdnaseq>

Protein Sequence

<aaseq>MGNCCRSPAAAAREDVKSSHFPASAGKKKPHQARNGGVGGGGGGGGGGGGGGGAGQKRLPVLGEEGCELIGGIDDKYALDRELGRGEFGVTYLCMDRDTKELLACKSISKRKLRTAVDVEDVRREVAIMRHLPKSASIVSLREACEDEGAVHLVMELCEGGELFDRIVARGHYTERAAANVTRTIVEVVQLCHRHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGEKFSEIVGSPYYMAPEVLKRNYGPEIDIWSAGVILYILLCGVPPFWAETEQGVAQAILRGNIDFKREPWPNVSENAKDLVRRMLEPDPKLRLTAKQVLEHPWLQNAKKAPNVPLGDIVKSRLKQFSRMNRFKRRALRVIADHLSAEEVEDIKEMFKAMDTDNDGIVSYEELKSGIAKFGSHLAESEVQMLIEAVDTNGKGALDYGEFLAVSLHLQRMANDEHLRRAFLFFDKDGNGYIEPEELREALVDDGAGDSMEVVNDILQEVDTDKDGKISYDEFVAMMKTGTDWRKASRHYSRGRFNSLSMKLIKDGSVKLVNE</aaseq>

Gene Sequence

<dnaseqindica>1..694#2686..2829#2909..3061#3449..3564#3677..3844#5155..5385#5479..5628#ATGGGGAACTGCTGCCGCTCGCCGGCCGCCGCGGCGCGGGAGGACGTCAAGTCGTCTCACTTCCCCGCATCGGCCGGGAAGAAGAAGCCCCACCAAGCGCGGAACGGCGGCGTGGGGGGAGGCGGCGGCGGGGGCGGCGGCGGCGGAGGAGGAGGAGGAGCGGGGCAGAAGCGGCTCCCCGTGCTCGGGGAGGAAGGGTGCGAGCTGATCGGAGGGATCGACGACAAGTACGCGCTGGACCGGGAGCTCGGGCGGGGGGAGTTCGGGGTGACGTACCTGTGCATGGATCGGGACACCAAGGAGCTGCTCGCCTGCAAGTCCATCTCCAAGCGGAAGCTGAGGACGGCGGTCGACGTGGAGGACGTGCGCCGGGAGGTCGCCATCATGCGCCACCTCCCCAAGAGCGCCAGCATCGTGTCGCTGCGGGAGGCGTGCGAGGACGAGGGCGCCGTGCACCTCGTCATGGAGCTCTGCGAAGGCGGGGAGCTCTTCGACCGCATCGTCGCGCGGGGCCACTACACGGAGCGCGCCGCCGCCAATGTCACCCGCACCATCGTGGAGGTCGTCCAGCTCTGCCACCGCCACGGCGTTATCCACCGGGACCTCAAGCCCGAGAACTTCCTCTTCGCCAACAAGAAGGAGAACTCGCCGCTCAAGGCCATCGATTTCGGCCTCTCCATCTTCTTCAAGCCCGGTAAGCCCTGCAGAATCGAGATCCGTTCCCAATTTCGAACAATTATCCACTCGCACTTCTGAATTTCCGTACAGCCTCGTGAGATCTCTAGCCTAATGGTCTGTTTTGGGTGGAATACTTGGTAGTGGATACCGCCGTAGCTAAATGCAGTTGTTCTGCTGTGTAATCTGCAAAGATTTTGCATTTCTTCCATAGAGGAAAAAGCTATCACCAGTTTTGGTACTTCTAGTTGAAGGCAGGATTTTTGGGTGGTCAATCGAATACTGTATATGACAGCGCCTTTACTATGGTATTTGGATGGAGTTAGTGTCTTTTTCACCAAACCGTAGTTCAATGTTGGTTGTTCCCCTTGCTATGGGATGCTATTTTGCTGGAATTGGTGCACTCCTTAGTAGTTCAATGCTGATAATTTGCAGAACACTAGTTCAATATTGGCCATTTCTATGATTGCATCAGTCTCAGTAGTTTGGTTTCCTGAAGACTGTATTGTGGGTTCAGTATTTGGTACACTAGGTTTAGGATCTAAGGTGTCTGTTGTATGGACTTACTATTTATAGAATCCAGAAGAAACAAATGCTGATGCATAGTCATGGCTAAATTTAGTTTTGTTGCACCAGACATGTTATTTGTACATTCATTGTGTCAATACATTATGTTGAGTTCAGCGTGCTGTACTTTGGGAGAACGCTATAGAACTGAAACTGCTATGTCTTAGCAGTAAATGCACTAACCTTACTACAGCAGTGGTGATTATGGCACTTAATTTACATATAAACTTATCACATGTTTTTACCAGTTGGAACATGGGATGTATTAAGTAAGACACATCCCTGCCTTTAGCACAATACTCTATTTCATGTTTTTAACTTGATTAGATTGGATTCCCTTTTAGGTGCTTCTCATCTTTAAGTATTCCCTTTATATTAGTTCATCTTCCCCTTTTCATGTTCAGTATTTTATGATTAATTAAGCTTTTTCAGTATGACTTTGGCATTGAACCGCAATTTTTTGCATGCCATAGCGGGAAACATGCCAAATTTACACAAGTAGTTGTATTTGTCATAACTCTTAAATGCTGTGATGTAACTTATTCAAGTACTTAATCCTTAGTCTAAAATTTACCGCCTGTTTTGCACATATGTTTGGATTGCTATTAAGAATTGTGCCATCTAAATTAACATTGTACCTTTCTCTACATTGTTCATTTAGTATTTTTTTCTTTTCATTTGGAACATATGCAATGCCATAATTGTCTTTCGGGGGGAAAGCTTGATGGCCAACCTTTGTTGATCAGACAGGGATAGAAATAGAGAAATGCACACTAATGGAATAGTGGCAAAAGATAGAAGCGTGATTTTTTTATGGAAAAGAAAGAATAGAGTTGTGAAGAGTGGCACAAGATTAAAAAAAAGTCTCTTAGAACAAAATGCAGCAAGCTCACTGAGGCTAACACCTAAAGCACCTAGCAGCCAAGGCAGTCCGCACTGCTGCACAGGGCAAGCTCATTGCCTATATACCTCATTTTATGTTTTTTTTTTATCTTCAGTGATTATTGGATTCTTCTTAGCTGCTACATACGCACTGCTATGCACTAATCACCCGGAGGCATTGAATTCTTATGGTGACATTGCTACCTTGCTTGTGTCATATTTTACATTTTTCTGCAGACAACTGAATTTTGTTATGTTACCTTGTAACAAGGTAGAGCATTTCGACACAGAAGGCTCAGAAACTTGAATTGTTTCTTGTTTGTTTGTGGAACCCCTGTGAGTTGAACTCCTTAGTATGTTTCATGAAAATTATGGTACCTAAGAATCATGAGGAAATGAGAGAGAATTGAATATGAAGTCAATCCTTGTCAATAATGGCATTTTCCTGCTTTATAATGTTGTGGACTCACAGTGCTTGTACAACAGTTGATCGTTGTTCTTTGTATACAGACAAAACTCCTAGTTCCATCCAGTCCTTATGTGATTGTTATGTTCTTTTAGGTGAGAAGTTTTCTGAAATTGTGGGAAGCCCATATTACATGGCTCCAGAGGTATTGAAGAGAAACTATGGTCCGGAAATAGATATTTGGAGTGCAGGAGTTATCTTGTATATTTTGTTATGTGGAGTTCCTCCATTTTGGGCTGGTATGTTGCTTTTCTTTTAAAAACTTCGCTATCATTGGCTGTCATCTCCCTCAAACAATCTCGCCTGGAATTTTTTCAGAGACTGAGCAAGGGGTGGCACAAGCCATTCTTCGTGGAAATATCGATTTCAAACGCGAACCCTGGCCAAATGTTTCAGAAAATGCTAAAGATTTGGTTCGACGCATGTTGGAGCCTGATCCAAAACTCAGGTTAACTGCAAAGCAAGTTCTTGGTATGTTTTACATAGCACTACAAAAAAATAGACACCTGATATTCTACTTGCATGCATCATACCATAAAATATCAAATTCAATGATCATTCAAACTTGATTATATTTTCTGTTCTTTCCAGCATTATAGCATTGTGATGGAATCTGATTCGATATTACTAGTTCTCCATTTCTTGGGATCACTAGCCATACATAAATTAATCATTGTCTAATATAGGCAACATATACCATATATTGTCTTTTAACGACATGGTATTTTCGTTTGTGAATTAGGATCTAGAGCATTAAAAAGGTCACTACTTACATTAATTAGTATAAATAACTTGTTAACTTTTGTTATTTTCCTTTTTTTCTTGGGGAATCTTGATATCCTTTCTTTTTTACCACAGAACATCCATGGCTTCAAAATGCTAAGAAAGCTCCAAATGTTCCTCTTGGAGATATTGTGAAGTCAAGGCTCAAACAATTTTCTAGAATGAATAGATTCAAAAGAAGAGCACTAAGGGTCTGTATCTTGCTCTCTTAACCTTTCCATCTTGTTCCGATGCTTTCCACCAAGTATCTACCATGTCAATCTACTGTTGAGTGACAAAAACTGATGTTGGGTATCTGACTAGGTCATTGCCGATCATTTATCTGCTGAGGAAGTTGAGGACATAAAGGAGATGTTCAAGGCTATGGACACTGATAACGATGGCATTGTATCTTATGAAGAATTAAAGAGCGGGATAGCAAAATTTGGTTCTCATCTGGCAGAATCGGAAGTGCAGATGCTTATCGAAGCTGTAAGTGTTTTCAGATATTCAGCCACAAATTTGTGGATTTTCAAAGTCACTGATCTGTGCATCCTTCATTTAGTAGGCCATGATATAGGCCCCTCTGATATCCCACAATAGCACAAGTACCCATCTGAGTCAAACATGCTCTGGGAGGTCTATATGACTATATATGTCTATATGGTCCAATTCCTTCACATATAGCAGTTTCAAGGATGCACACGGGACTATATAGGAGGAACTAGATGTTAGGGGGCTTCTAACTTAGAAACCTCAACTGCTGCATCTATTTGTTTTATATACATGGTACACATGATCTTTTCAATGAGATCGACAATTTTTGCATGACCATGTTTTCTGTCGGTCCATTGCCCCAGTTTTCATGCTAACCTATTGCTTACGTGTAAAATATGTATTGATTTTGTTCTGTTATTCACGATATATTTTTAGAATTAGAGTACATGTCAATGGCCAATGGAGTATTGCATCAATGTGTTTCCTTCCAGAATAAGACTGAAAATTTGCAATGGATATTTATTCTAGTTCACCACTTGTTCTAGGTTCATGTAACTGGTATCCTTCTAGCTGACAAAAGCTAGGATAAAAGCATTTGGGGTGCATGATTTCTACATCATATTCGAGTATTTTGTCTGTTCCATCTTCACTAGTGTTATTAATGGCTTGTTAGTGTTGCTTAGGTGTAGGAGCTGAACCTGCACTTGTAGATTGTAGGACTAGGAAACTAGCTGGTACGATTTGATTGTAGTACAATTATTTGCTGGGATAAATATATTTTTCTTCTCATTTTTTAAGCAATAGGAGTGGTTTTACTTTTCACCATATGTGTATCAAGAAACTTATGTGTAGTAAGTAGCCTTGTGAAGTAACAGAACGGTAGGGCAAATAGAATGAAGTATTGCATCTTGTTTTGATGTGCACAATGAAAGTTACCTAACCTTCATATAGAACCACCATTCTGGCAGTTCCATTTCGGGGCTTAAGACCCTTTGGAACCATATCATCACTTGAGTTATGTGTTTCCTTTGGTGGATCGTGTTTGATGATGGATCCGCATGGTCCACGGCATCACCTGTGGAGCTGTCTTGATCGAGTAAATGGTTAATATATTACTACTACAATATAACGCAAGGAACAAAGTAATGTGCAGGGAGAAGCATATTCATAGAAGTGGGATAGATTACTGAATTCACGACTAACACTCACTTTTGTAGATGTATTATGGTTATCGTTAATCAGATAGTTCGTATAGTACTAGACTACTTTGCAAGTCTTTAATTGATCATGTGTTTTGCAAATAGGTGGATACAAATGGTAAGGGTGCTCTAGATTATGGTGAATTTTTGGCTGTCTCTCTTCATTTGCAAAGGATGGCAAATGATGAGCACCTCCGGCGAGCCTTCCTATTTTTTGACAAGGATGGCAATGGCTACATAGAGCCTGAAGAGCTTCGAGAGGCTCTAGTGGACGATGGAGCAGGTGACAGCATGGAAGTGGTGAACGACATATTGCAAGAAGTTGACACTGATAAGGTGATGATATTTCTGAATACAACCATTCTTTTGGTAATATCGTTCAAAACTTTTTTTTTTATCTAAATAACATATGTTTTCTTTTCACTGCAGGATGGCAAGATTAGCTATGACGAATTTGTAGCAATGATGAAGACGGGCACAGATTGGAGAAAGGCGTCCCGGCATTACTCTAGAGGAAGATTCAACAGCCTTAGCATGAAGCTTATAAAGGATGGGTCCGTAAAACTGGTCAATGAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA004740