BGIOSGA004752

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Revision as of 11:10, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA004752| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA004752, complete gene.| tag = P0506B1...")
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Gene Name

BGIOSGA004752

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA004752, complete gene.

LocusTag

P0506B12.18-1

Ensembl Transcript ID

BGIOSGA004752-TA

Ensembl Protein ID

BGIOSGA004752-PA

Length

4169

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:39246402..39250570

Sequence Coding Region

39246402..39246777,39247362..39247524,39247634..39247682,39247788..39248711,39248799..39248894
,39248987..39249102,39249190..39249292,39249415..39249503,39249595..39249745
,39249840..39249986,39250083..39250211,39250296..39250374,39250461..39250570

Genome Context

<gbrowseImage1> name=IndicaChromosome01:39246402..39250570 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:39246402..39250570 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGTCGCCGTACGACCACCAGTCGCCGCATGCGCAGCACCCGTCGGGGTTGCCGAGGCCGCCGGGGGCGGGGGCGGGTGCGGCGGCGGGCGGGTTCGCGCGGGGGCTGATGAAGCAGCCGTCGCGGCTGGCGTCCGGGGTGAGGCAGTTCGCGTCGAGGGTGTCGATGAAGGTGCCGGAGGGGGTGGGGGGGATGCGGCCCGGTGGCGGGAGGATGACGCGGATGCAGTCCAGCGCGCAGGTGGGGCTCCGGGGGCTCCGCTTCCTCGACAAGACGTCCGGCGGGAAGGAGGGGTGGAAGTCCGTCGAGCGCCGCTTCGACGAGATGAACCGCAACGGCCGCCTCCCCAAGGAGAGCTTCGGCAAGTGCATCGGCATGGGGGACTCCAAGGAGTTCGCCGGCGAGCTGTTCGTGGCGCTGGCGCGGCGGAGGAACCTGGAGCCGGAGGACGGCATCACCAAGGAGCAGCTCAAGGAGTTCTGGGAGGAGATGACCGACCAGAACTTCGACTCGCGGCTTCGCATTTTCTTTGACATGTGCGACAAGAATGGCGATGGGATGCTCACGGAAGATGAGGTCAAGGAGGTTATTATACTGAGTGCGTCGGCGAACAAGCTGGCGAAGCTGAAGGGACACGCGGCGACGTACGCGTCGCTGATCATGGAGGAGCTGGACCCGGACGACCGCGGGTACATCGAGATCTGGCAGCTGGAGACGCTGCTGCGCGGCATGGTGAGCGCGCAGGCGGCGCCGGAGAAGATGAAGCGGACGACGTCGAGCCTCGCGAGGACGATGATCCCGTCGCGGTACCGGAGCCCGCTGAAGCGGCACGTGTCCAGGACGGTGGACTTCGTGCACGAGAACTGGAAGCGGATCTGGCTCGTCGCGCTGTGGCTCGCCGTCAACGTCGGCCTCTTCGCCTACAAGTTCGAGCAGTACGAGCGGCGCGCCGCGTTCCAGGTGATGGGCCACTGCGTGTGCGTGGCCAAGGGCGCCGCCGAGGTGCTCAAGCTCAACATGGCGCTCATCCTCCTCCCCGTGTGCCGGAACACGCTCACCACGCTCAGGTCCACGGCGCTCAGCCACGTCATCCCCTTCGACGACAACATCAACTTCCACAAGGTGATCGCGGCGACCATCGCCGCCGCCACCGCCGTCCACACGCTGGCGCACGTCACCTGCGACTTCCCGAGGCTGATCAACTGCCCCAGCGACAAGTTCATGGCGACGCTGGGGCCGAACTTCGGGTACAGGCAGCCGACATACGCCGACCTGCTGGAGAGCGCCCCCGGCGTCACCGGCATCCTCATGATCATCATCATGTCCTTCTCCTTCACGCTGGCCACGCACTCCTTCCGCCGGAGCGTCGTCAAGCTGCCGTCGCCGCTGCACCACCTCGCCGGCTTCAACGCCTTCTGGTACGCGCACCACCTCCTGGTGCTCGCCTACGTCCTCCTCGTCGTGCACTCCTACTTCATATTCCTCACCAGGGAGTGGTACAAGAAAACGACATGGATGTACCTGATAGTCCCAGTGCTCTTCTATGCATGCGAGAGAACGATCAGAAAAGTTCGAGAGAACAACTACCGCGTGAGCATCGTCAAGGCAGCGATTTACCCAGGAAATGTGCTCTCTCTTCACATGAAGAAGCCGCCGGGTTTCAAGTACAAGAGCGGGATGTACCTGTTTGTGAAGTGCCCTGATGTCTCTCCTTTCGAATGGCATCCCTTCTCCATCACTTCTGCACCTGGAGATGACTACCTGAGTGTGCATATCCGTACACTAGGTGACTGGACGACTGAACTCAGAAACCTGTTTGGGAAGGCTTGCGAGGCACAGGTTACTTCTAAGAAGGCTACCCTTTCAAGACTTGAAACTACAGTTGTGGCGGACGCTCAGACAGAGGATACTAGGTTTCCTAAGGTCCTTATTGATGGGCCCTATGGTGCACCGGCGCAAAACTACAAGAAGTATGACATTCTTTTGCTTATTGGTCTTGGAATTGGTGCTACTCCTTTCATCAGCATTCTGAAGGATCTGTTGAACAACATTAAATCCAACGAAGAGGTGGAAAGCATACATGGTTCTGAGATAGGCAGCTTCAAGAACAATGGGCCAGGAAGAGCTTACTTCTACTGGGTGACCAGAGAGCAAGGGTCCTTCGAGTGGTTTAAAGGAGTCATGAACGATGTCGCTGAAAGTGATCACAATAATATTATAGAGATGCACAATTACCTGACCAGCGTGTATGAAGAAGGCGACGCAAGGTCAGCTTTGATTGCCATGGTTCAGTCACTTCAACATGCCAAAAATGGTGTGGATATCGTCTCCGGCAGCAGGATTCGCACACATTTTGCGAGGCCTAACTGGAGAAAGGTGTTCTCTGACTTGGCGAATGCCCACAAAAACTCACGCATAGGTGTTTTCTATTGTGGATCCCCTACACTCACGAAACAACTCAAGGATCTTTCAAAAGAATTCAGCCAGACAACCACAACTAGATTCCACTTCCACAAGGAAAACTTTTAA</cdnaseq>

Protein Sequence

<aaseq>MASPYDHQSPHAQHPSGLPRPPGAGAGAAAGGFARGLMKQPSRLASGVRQFASRVSMKVPEGVGGMRPGGGRMTRMQSSAQVGLRGLRFLDKTSGGKEGWKSVERRFDEMNRNGRLPKESFGKCIGMGDSKEFAGELFVALARRRNLEPEDGITKEQLKEFWEEMTDQNFDSRLRIFFDMCDKNGDGMLTEDEVKEVIILSASANKLAKLKGHAATYASLIMEELDPDDRGYIEIWQLETLLRGMVSAQAAPEKMKRTTSSLARTMIPSRYRSPLKRHVSRTVDFVHENWKRIWLVALWLAVNVGLFAYKFEQYERRAAFQVMGHCVCVAKGAAEVLKLNMALILLPVCRNTLTTLRSTALSHVIPFDDNINFHKVIAATIAAATAVHTLAHVTCDFPRLINCPSDKFMATLGPNFGYRQPTYADLLESAPGVTGILMIIIMSFSFTLATHSFRRSVVKLPSPLHHLAGFNAFWYAHHLLVLAYVLLVVHSYFIFLTREWYKKTTWMYLIVPVLFYACERTIRKVRENNYRVSIVKAAIYPGNVLSLHMKKPPGFKYKSGMYLFVKCPDVSPFEWHPFSITSAPGDDYLSVHIRTLGDWTTELRNLFGKACEAQVTSKKATLSRLETTVVADAQTEDTRFPKVLIDGPYGAPAQNYKKYDILLLIGLGIGATPFISILKDLLNNIKSNEEVESIHGSEIGSFKNNGPGRAYFYWVTREQGSFEWFKGVMNDVAESDHNNIIEMHNYLTSVYEEGDARSALIAMVQSLQHAKNGVDIVSGSRIRTHFARPNWRKVFSDLANAHKNSRIGVFYCGSPTLTKQLKDLSKEFSQTTTTRFHFHKENF</aaseq>

Gene Sequence

<dnaseqindica>1..376#961..1123#1233..1281#1387..2310#2398..2493#2586..2701#2789..2891#3014..3102#3194..3344#3439..3585#3682..3810#3895..3973#4060..4169#ATGGCGTCGCCGTACGACCACCAGTCGCCGCATGCGCAGCACCCGTCGGGGTTGCCGAGGCCGCCGGGGGCGGGGGCGGGTGCGGCGGCGGGCGGGTTCGCGCGGGGGCTGATGAAGCAGCCGTCGCGGCTGGCGTCCGGGGTGAGGCAGTTCGCGTCGAGGGTGTCGATGAAGGTGCCGGAGGGGGTGGGGGGGATGCGGCCCGGTGGCGGGAGGATGACGCGGATGCAGTCCAGCGCGCAGGTGGGGCTCCGGGGGCTCCGCTTCCTCGACAAGACGTCCGGCGGGAAGGAGGGGTGGAAGTCCGTCGAGCGCCGCTTCGACGAGATGAACCGCAACGGCCGCCTCCCCAAGGAGAGCTTCGGCAAGTGCATCGGTGAGTCCCCGGCCCGCAGCTTCCATCGATGGTGCGATCCAGAAACAGATAGCCGTAAATTCAGTTCCAAAAGGGCGATTAGTTGTTGCTAACAAGAACACAGCAGAAATATCTCTGATTGAAGGAATATTGTGTTGGCGCCATCTTTCTTGTTTTCTGTCAATCATTTTTATGCTCCGCAACAGTTGTGTGATGATGCCGTGAACTGTTCATCTTTGCCCAAAGAGTTGGCAGGGACAGCTCTGCCTAACTGAGATCGGCTCTTTGCTTCTCAACTAATCCCCTCGAATTAATGCTTTTGCTTTGCGAAATGGTCCATTATTAAGCAGTAAATCGGTACAGCAAAAGAAACGAGTACTCTGTACTTCTCTTTTGTTATTGCACATGCTTACGGAGAAAATGGAGTTATAGCGACCGGTTCATGCTGGAGGCAGTTAGGCGATCGATGGAATAATAATCGTGTAGCGCTAAGCGAATCATTTCTCTTTTTAGATAGTTTGGATGTCTAACAATGCCCATGATTCATGATCTTTTAATTGAACTAAGAAAAATTAATCCATGGTGGATCTGCTTGGCATCAAAAGGCATGGGGGACTCCAAGGAGTTCGCCGGCGAGCTGTTCGTGGCGCTGGCGCGGCGGAGGAACCTGGAGCCGGAGGACGGCATCACCAAGGAGCAGCTCAAGGAGTTCTGGGAGGAGATGACCGACCAGAACTTCGACTCGCGGCTTCGCATTTTCTTTGACATGTAATGGTTCACCGTCCCAGTTATAATTTCCAAGATGAACACGATAAATCGATCGCCAACTGACGAAATGGATTTTTTTTTTCCTTCCCCCTCTCTCTGATGCATCCAGGTGCGACAAGAATGGCGATGGGATGCTCACGGAAGATGAGGTCAAGGAGGTGAGGACGAAAGAATTCTTCTGGATTGGATCTCATCTGCCATTCTGGAACATGGAGAGAGAGGATTAAATATCGTTTTCTTGTTTGGCTGGAATGGATTTGCAGGTTATTATACTGAGTGCGTCGGCGAACAAGCTGGCGAAGCTGAAGGGACACGCGGCGACGTACGCGTCGCTGATCATGGAGGAGCTGGACCCGGACGACCGCGGGTACATCGAGATCTGGCAGCTGGAGACGCTGCTGCGCGGCATGGTGAGCGCGCAGGCGGCGCCGGAGAAGATGAAGCGGACGACGTCGAGCCTCGCGAGGACGATGATCCCGTCGCGGTACCGGAGCCCGCTGAAGCGGCACGTGTCCAGGACGGTGGACTTCGTGCACGAGAACTGGAAGCGGATCTGGCTCGTCGCGCTGTGGCTCGCCGTCAACGTCGGCCTCTTCGCCTACAAGTTCGAGCAGTACGAGCGGCGCGCCGCGTTCCAGGTGATGGGCCACTGCGTGTGCGTGGCCAAGGGCGCCGCCGAGGTGCTCAAGCTCAACATGGCGCTCATCCTCCTCCCCGTGTGCCGGAACACGCTCACCACGCTCAGGTCCACGGCGCTCAGCCACGTCATCCCCTTCGACGACAACATCAACTTCCACAAGGTGATCGCGGCGACCATCGCCGCCGCCACCGCCGTCCACACGCTGGCGCACGTCACCTGCGACTTCCCGAGGCTGATCAACTGCCCCAGCGACAAGTTCATGGCGACGCTGGGGCCGAACTTCGGGTACAGGCAGCCGACATACGCCGACCTGCTGGAGAGCGCCCCCGGCGTCACCGGCATCCTCATGATCATCATCATGTCCTTCTCCTTCACGCTGGCCACGCACTCCTTCCGCCGGAGCGTCGTCAAGCTGCCGTCGCCGCTGCACCACCTCGCCGGCTTCAACGCCTTCTGGTACGCGCACCACCTCCTGGTGCTCGCCTACGTCCTCCTCGTCGTGCACTCCTACTTCATATTCCTCACCAGGGAGTGGTACAAGAAAACGGTAAAATTCTCATCAGGCGCTCGATCTTCCTGTGACTGCAATGAAATTAAGTGACATCATCTCAAAATGTCAATCTTGTTCCTGCAGACATGGATGTACCTGATAGTCCCAGTGCTCTTCTATGCATGCGAGAGAACGATCAGAAAAGTTCGAGAGAACAACTACCGCGTGAGCATCGTCAAGGTAAGCAGCTGACTCATGTAACTGGGATCCATTCTTTCTTAGCTGTTTGCCTGTTACTCATAAAATTGGTGATGTGGGTGTGGCACATGCAGGCAGCGATTTACCCAGGAAATGTGCTCTCTCTTCACATGAAGAAGCCGCCGGGTTTCAAGTACAAGAGCGGGATGTACCTGTTTGTGAAGTGCCCTGATGTCTCTCCTTTCGAATGGTAACCAATTCACCCTTGTCGCATGAATGCATGTCCAAAATGTGGTTTATCTGAGACTATTTCTAACTGTTTTTCCTGCCTTTGCAGGCATCCCTTCTCCATCACTTCTGCACCTGGAGATGACTACCTGAGTGTGCATATCCGTACACTAGGTGACTGGACGACTGAACTCAGAAACCTGTTTGGGAAGGTCAGTTGAGGCAGCACAGCTGCAAAGAGTTGCAAGAACAATTAGTTTCCCTCGTTAAACAATTCTAGGAGAATAATGCAGATTGCCAAAAGATGGAGAACTAAATCTTAGTATTCATGTAGGCTTGCGAGGCACAGGTTACTTCTAAGAAGGCTACCCTTTCAAGACTTGAAACTACAGTTGTGGCGGACGCTCAGACAGAGGATACTAGGTGACTAGAGAAGCTCTTCTATTTCACCTACCAAATGCATTTGGTCTACAATCATTTTCTAACCCTGGTTATCTTCACAATGTTGCTTCAGGTTTCCTAAGGTCCTTATTGATGGGCCCTATGGTGCACCGGCGCAAAACTACAAGAAGTATGACATTCTTTTGCTTATTGGTCTTGGAATTGGTGCTACTCCTTTCATCAGCATTCTGAAGGATCTGTTGAACAACATTAAATCCAACGAAGTAAAATTCTTCCCTGATAAATAGTGTTTCCTTATTTCCTACAATGTTGTATAACTGGAGGAAATAGATAACTAAAATGAGTTGATGGCAACAGGAGGTGGAAAGCATACATGGTTCTGAGATAGGCAGCTTCAAGAACAATGGGCCAGGAAGAGCTTACTTCTACTGGGTGACCAGAGAGCAAGGGTCCTTCGAGTGGTTTAAAGGAGTCATGAACGATGTCGCTGAAAGTGATCACAATGTACTGTCTCACTCTCAATTCTTCGCTGTATTTTCAAATTTCCATAGTTCCTTCAGTCATAGATAGAACATAAACTAATATATGTGGGAATTGCAGAATATTATAGAGATGCACAATTACCTGACCAGCGTGTATGAAGAAGGCGACGCAAGGTCAGCTTTGATTGCCATGGTTCAGTCACTTCAACATGCCAAAAATGGTGTGGATATCGTCTCCGGCAGCAGGGTATTCGACATCTTCCCCCTCTTCTATCTGAAATACTTATTTATTTCCAGTGTATTCCTCTTATTTCTGATTGATCTGTTGCAGATTCGCACACATTTTGCGAGGCCTAACTGGAGAAAGGTGTTCTCTGACTTGGCGAATGCCCACAAAAACTCACGCATAGGTGAGCCTCTTTTTTCAGCGAACATCGTCGATGCAACAATTTTGAGCTTTGCAGTAACGGTTGTTAACAAATCCATAAATATGCAGGTGTTTTCTATTGTGGATCCCCTACACTCACGAAACAACTCAAGGATCTTTCAAAAGAATTCAGCCAGACAACCACAACTAGATTCCACTTCCACAAGGAAAACTTTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA004752