BGIOSGA004771

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Revision as of 11:11, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA004771| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA004771, complete gene.| tag = OsI_043...")
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Gene Name

BGIOSGA004771

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA004771, complete gene.

LocusTag

OsI_04375

Ensembl Transcript ID

BGIOSGA004771-TA

Ensembl Protein ID

BGIOSGA004771-PA

Length

2920

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:39481837..39484756

Sequence Coding Region

39481837..39482047,39483021..39483368,39484044..39484756

Genome Context

<gbrowseImage1> name=IndicaChromosome01:39481837..39484756 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:39481837..39484756 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGAAGGGAGAGGGCCCGGCGATCGGCATCGACCTCGGCACCACCTACTCGTGCGTCGGCGTGTGGCAGCACGACCGGGTGGAGATCATCGCCAACGACCAGGGGAACCGCACCACGCCGTCGTATGTCGCGTTCACCGACTCCGAGCGGCTCATCGGCGACGCCGCCAAGAACCAGGTCGCCATGAACCCCATCAACACCGTCTTCGATGCCAAGCGACTGATAGGTAGGCGGTTCTCCGACCCGTCCGTGCAGAGCGACATGAAGCTGTGGCCGTTCAAGGTCATCCCTGGCCCCGGCGACAAGCCTATGATTGTGGTGCAGTACAAGGGCGAGGAGAAGCAGTTCTCCGCCGAGGAGATCTCCTCCATGGTGCTCATCAAGATGAGGGAGATCGCTGAAGCCTACCTCGGCTCCAACATCAAGAACGCCGTGGTGACTGTGCCGGCCTACTTCAACGACTCGCAGAGGCAGGCCACCAAGGACGCCGGTGTCATTGCCGGCCTCAACGTGATGCGCATCATCAACGAGCCCACCGCCGCGGCCATCGCCTACGGAGGTGTCATGACCGTGCTCATCCCGAGGAACACCACCATCCCCACCAAGAAGGAGCAGGTATTCTCGACCTACTCCGACAATCAGCCTGGCGTCCTGATCCAGGTGTACGAGGGTGAGCGTGCCCGGACCAAGGACAACAACCTGCTGGGCAAGTTCGAGCTCTCCGGCATCCCTCCAGCTCCCCGCGGCGTGCCCCAGATCACCGTCTGCTTCGACATCGACGCCAATGGCATCCTCAACGTCTCTGCCGAGGACAAGACCACCGGGCAGAAGAACAAGATCACCATCACCAACGACAAGGGCAGGCTGAGCAAGGAGGAGATCGAGAAGATGGTGCAGGAGGCGGAGAAGTACAAGGCGGAGGACGAGGAGCACAAGAAGAAGGTGGACGCCAAGAACGCGCTCGAGAACTACGCCTACAACATGAGGAACACCATCAAGGACGACAAGATCGCCTCCAAGCTCTCGGCGGACGACAAGAAGAAGATCGAGGACGCCATCGACGGCGCCATCAACTGGCTCGACAGCAACCAGCTCGCGGAGGCGGACGAGTTCGAGGACAAGATGAAGGAGCTGGAGAGCATCTGCAACCCCATCATCGCGAAGATGTACCAGGGCGCCGGCGCGGACATGGGCGGCGCCGCTGGCATGGACGAGGACGCGCCGGCGGGTGGCAGCGGTGCAGGCCCCAAGATCGAGGAGGTCGATTAA</cdnaseq>

Protein Sequence

<aaseq>MAKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDPSVQSDMKLWPFKVIPGPGDKPMIVVQYKGEEKQFSAEEISSMVLIKMREIAEAYLGSNIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDEEHKKKVDAKNALENYAYNMRNTIKDDKIASKLSADDKKKIEDAIDGAINWLDSNQLAEADEFEDKMKELESICNPIIAKMYQGAGADMGGAAGMDEDAPAGGSGAGPKIEEVD</aaseq>

Gene Sequence

<dnaseqindica>1..211#1185..1532#2208..2920#ATGGCGAAGGGAGAGGGCCCGGCGATCGGCATCGACCTCGGCACCACCTACTCGTGCGTCGGCGTGTGGCAGCACGACCGGGTGGAGATCATCGCCAACGACCAGGGGAACCGCACCACGCCGTCGTATGTCGCGTTCACCGACTCCGAGCGGCTCATCGGCGACGCCGCCAAGAACCAGGTCGCCATGAACCCCATCAACACCGTCTTCGGTACGTGCTCCTGCTATTTCTTCCTTATTTTTTTTTTGAGCTATCGTTGTTACTAGTCCTTTTGCACGCTCTAGTTCGAATCTAGATTGAACTGTCATCTGGATGGCTGGATGCATTCGTTATTAAGATGTTCCTGGGTTGCGATGATGTTGATTTCACTCCGAAACGAAGACAAACATTGTATCTGTGCTCTGTTTGGGTGTGCTAAATTGCTAATCTCATAAAACCAAAGAATAAGGATTATATTAAACAAGTATCATGCATTTACTGCAACTCTCAGGGTCTGTACTTGAATGGTTGAACATTGAAATTGATAGGAGTTGCTAGTTGTCAAGAGATTGAATTGAACAATTTGCTAGTTGTACATGTTACATTTTGTTGCAGTGGTGCATTTTGTTCTATGGAATTTTCGTCTGGAAATTCTGCTTGTTGGCTAGTTAGTAATGCGGTGGTAAATCACAGGGAGTAGGCAACTCATATTCTCGTGGAATTTGCTTTGAGCGAAATATATACCCACAATTTGTTTCGAGTACATTGCTTACTGATTATAAATTAAGCTGGCTTTACTGCTTGTGTGCCTGCTGTACTCTGCTTTAGTTATAAGCTGAATTTTCATATGAATTCAATTGAACAATCTGACTCATAATCTCGTTCGTCTTGAAATTCTGCTTGTTGGCTAGTTAGTAATGCGGTGGTAAATCACAGGGAGTAGGCAACTCATATTCTCGTGGAATTTGCTTTGAGCGAAATATATACCCACAATTTGTATTAGTACATTGCTTACTGATTGATAAATTAAGCTAGCTTTACTGCTTGTCATGCCTGCTGTACTCTGCTTTACCTGTAAGATGAATTTTTAAGCTGGCTTTACTGCTTGTCATGCCTGCTGTGCTCTGCTTTACCTGTAAGCTGAATTTTCATATGAATTCAATTGAACAATCTGACTCATAATCTCGTTCAATTTTGAATGCAGATGCCAAGCGACTGATAGGTAGGCGGTTCTCCGACCCGTCCGTGCAGAGCGACATGAAGCTGTGGCCGTTCAAGGTCATCCCTGGCCCCGGCGACAAGCCTATGATTGTGGTGCAGTACAAGGGCGAGGAGAAGCAGTTCTCCGCCGAGGAGATCTCCTCCATGGTGCTCATCAAGATGAGGGAGATCGCTGAAGCCTACCTCGGCTCCAACATCAAGAACGCCGTGGTGACTGTGCCGGCCTACTTCAACGACTCGCAGAGGCAGGCCACCAAGGACGCCGGTGTCATTGCCGGCCTCAACGTGATGCGCATCATCAACGAGCCCACCGCCGCGGCCATCGCCTACGGTCTTGACAAGAAGGCCACCAGCTCCGGCGAGAAGAACGTGCTCATCTTCGATCTTGGCGGTGGCACGTTCGATGTGTCGCTGCTCACCATTGAGGAGGGCATTTTCGAGGTGAAGGCCACTGCTGGTGACACTCACCTTGGTGGTGAGGACTTCGACAACCGCATGGTGAACCATTTCGTCCAGGAGTTCAAGCGCAAGAACAAGAAGGACATCAGCGGCAACCCGCGTGCTCTGCGCCGGCTGCGCACGGCCTGCGAGCGCGCCAAGCGCACGCTGTCGTCGACCGCACAGACCACCATTGAGATCGACTCCCTGTACGAGGGCATCGACTTCTACTCGACCATCACCAGGGCTCGCTTCGAGGAGCTCAACATGGACCTGTTCCGCAAGTGCATGGAGCCGGTGGAGAAGTGCCTGCGCGACGCCAAGATGGACAAGAGCAGCGTGCACGACGTCGTGCTCGTCGGCGGCTCCACCCGCATCCCCAAGGTGCAGCAGCTGCTTCAGGACTTCTTCAACGGCAAGGAGCTGTGCAAGAGCATCAACCCCGACGAGGCCGTGGCATACGGCGCCGCTGTCCAGGCCGCCATCCTCAGCGGCGAGGGCAACGAGAAGGTGCAGGACCTGCTTCTGCTCGACGTCACGCCGCTGTCGCTGGGGCTTGAGACAGCAGGAGGTGTCATGACCGTGCTCATCCCGAGGAACACCACCATCCCCACCAAGAAGGAGCAGGTATTCTCGACCTACTCCGACAATCAGCCTGGCGTCCTGATCCAGGTGTACGAGGGTGAGCGTGCCCGGACCAAGGACAACAACCTGCTGGGCAAGTTCGAGCTCTCCGGCATCCCTCCAGCTCCCCGCGGCGTGCCCCAGATCACCGTCTGCTTCGACATCGACGCCAATGGCATCCTCAACGTCTCTGCCGAGGACAAGACCACCGGGCAGAAGAACAAGATCACCATCACCAACGACAAGGGCAGGCTGAGCAAGGAGGAGATCGAGAAGATGGTGCAGGAGGCGGAGAAGTACAAGGCGGAGGACGAGGAGCACAAGAAGAAGGTGGACGCCAAGAACGCGCTCGAGAACTACGCCTACAACATGAGGAACACCATCAAGGACGACAAGATCGCCTCCAAGCTCTCGGCGGACGACAAGAAGAAGATCGAGGACGCCATCGACGGCGCCATCAACTGGCTCGACAGCAACCAGCTCGCGGAGGCGGACGAGTTCGAGGACAAGATGAAGGAGCTGGAGAGCATCTGCAACCCCATCATCGCGAAGATGTACCAGGGCGCCGGCGCGGACATGGGCGGCGCCGCTGGCATGGACGAGGACGCGCCGGCGGGTGGCAGCGGTGCAGGCCCCAAGATCGAGGAGGTCGATTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA004771