BGIOSGA004772

From RiceWiki
Revision as of 11:11, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA004772| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA004772, complete gene.| tag = P0408C0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA004772

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA004772, complete gene.

LocusTag

P0408C03.31-1

Ensembl Transcript ID

BGIOSGA004772-TA

Ensembl Protein ID

BGIOSGA004772-PA

Length

1141

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:39516623..39517763

Sequence Coding Region

39516623..39516738,39516853..39516975,39517094..39517255,39517358..39517763

Genome Context

<gbrowseImage1> name=IndicaChromosome01:39516623..39517763 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:39516623..39517763 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACGCGTCCTCGCCCTTCAGCTTCCACGAGCTCAGGCGGCAGGCCTCGTCCTACCTCACCGACAAGATCCGCTCCGCGCGGCTCGCGCTCACCGATGTTACCCCGACGCAGCTGATGACGGAGGAGGCGACGAGCGGGGACGCATCGCCGCCGAACGTGAAGACGATGAGCCTCATCGCGCGGCAGGCGTTCGAGATCGACGAGTACGTCAGGATCTCCGACATCCTCCACAAGAGGTTCGCGAGGTTCGACAGGCGGCAGTGGCGTGAGGCGTACAAGGCCCTCCTCCTCCTCGAGCACCTCCTGACGCACGGCCCCCGTAGCGTCGCGTTGGAGTTCCAGAGGGATCGGGAGGTCATCGAGCAGATGGTCTCCTTCCAGCACATCGACGAGAAAGGTTTCAACTGGGGGATGACGGTGAAGAGCAAGTCGGAGCGCGTGCTGAGGCTGCTGGAGCGGGGCCCCTTCCTGGAGGATGAGCGTGAGCGTGCGCGCAAGATAGCGCACGAGATCAAGGGATTCGGCAGCTTCAACCTCAGCAGCGCGCATGCGTCGGGGTCGGCGGCGGCAGCCCTCCGCGCGGCGGCGATGGAGCACCAGTGCTACGGCCGGAGCAACTCGCGGTACGAGGGCAGGTGGAGGAGGGAGGCCTGCGTGGACGACGGCGACAAGGAGAACCTGCTGGTGGTGTCGATGGCCGAGGCGGAGGCCGAGGCGGCGGCGGAGGAGCCGCACCACTACCACCACCCGTTCTACGGCTTCGGGCAGCAGCGGCCGGAGGCGATGCTGCTCCTGAGCCAGTAG</cdnaseq>

Protein Sequence

<aaseq>MDASSPFSFHELRRQASSYLTDKIRSARLALTDVTPTQLMTEEATSGDASPPNVKTMSLIARQAFEIDEYVRISDILHKRFARFDRRQWREAYKALLLLEHLLTHGPRSVALEFQRDREVIEQMVSFQHIDEKGFNWGMTVKSKSERVLRLLERGPFLEDERERARKIAHEIKGFGSFNLSSAHASGSAAAALRAAAMEHQCYGRSNSRYEGRWRREACVDDGDKENLLVVSMAEAEAEAAAEEPHHYHHPFYGFGQQRPEAMLLLSQ</aaseq>

Gene Sequence

<dnaseqindica>1..116#231..353#472..633#736..1141#ATGGACGCGTCCTCGCCCTTCAGCTTCCACGAGCTCAGGCGGCAGGCCTCGTCCTACCTCACCGACAAGATCCGCTCCGCGCGGCTCGCGCTCACCGATGTTACCCCGACGCAGCTGTGAGTGGCTCCTTCCTCGATCGATCCTTCCCCCGTCTTGTTGTTCGGATAGATGTCACCGATCCGTTGTTCCATCGTGTTCTTGATGCTGAGGTTTTTGTTGGTATGGTCCAGGATGACGGAGGAGGCGACGAGCGGGGACGCATCGCCGCCGAACGTGAAGACGATGAGCCTCATCGCGCGGCAGGCGTTCGAGATCGACGAGTACGTCAGGATCTCCGACATCCTCCACAAGAGGTGAGCGATGGACGTGCCTAGCTTGCCTCTCTTAACGAAGCCACCCACACGCACGCTGCGTTTGTGATCTGCTCGTTTGTTGGCTGATCGATTGATTCGGGGGCGGGAAATCTTACAGGTTCGCGAGGTTCGACAGGCGGCAGTGGCGTGAGGCGTACAAGGCCCTCCTCCTCCTCGAGCACCTCCTGACGCACGGCCCCCGTAGCGTCGCGTTGGAGTTCCAGAGGGATCGGGAGGTCATCGAGCAGATGGTCTCCTTCCAGCACATCGACGAGAAAGGGTCCGTTTCAATTCTTCGTCTCGACTCGATCATATCTTCTCCTGATGTTCTCTCGCCCTTCTTTCTCATCACCGATGGTTTCTTATTGAATCCGAGTTGCAGTTTCAACTGGGGGATGACGGTGAAGAGCAAGTCGGAGCGCGTGCTGAGGCTGCTGGAGCGGGGCCCCTTCCTGGAGGATGAGCGTGAGCGTGCGCGCAAGATAGCGCACGAGATCAAGGGATTCGGCAGCTTCAACCTCAGCAGCGCGCATGCGTCGGGGTCGGCGGCGGCAGCCCTCCGCGCGGCGGCGATGGAGCACCAGTGCTACGGCCGGAGCAACTCGCGGTACGAGGGCAGGTGGAGGAGGGAGGCCTGCGTGGACGACGGCGACAAGGAGAACCTGCTGGTGGTGTCGATGGCCGAGGCGGAGGCCGAGGCGGCGGCGGAGGAGCCGCACCACTACCACCACCCGTTCTACGGCTTCGGGCAGCAGCGGCCGGAGGCGATGCTGCTCCTGAGCCAGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA004772