BGIOSGA004794

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Revision as of 11:11, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA004794| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA004794, complete gene.| tag = P0005H1...")
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Gene Name

BGIOSGA004794

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA004794, complete gene.

LocusTag

P0005H10.6

Ensembl Transcript ID

BGIOSGA004794-TA

Ensembl Protein ID

BGIOSGA004794-PA

Length

5217

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:39849923..39855139

Sequence Coding Region

39849923..39849962,39851118..39851191,39851276..39851360,39851458..39851583,39851685..39851921
,39852015..39852251,39852868..39852911,39853395..39853577,39854280..39854370
,39854892..39854935,39855017..39855139

Genome Context

<gbrowseImage1> name=IndicaChromosome01:39849923..39855139 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:39849923..39855139 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGTCTTGGCGCATCGGCTGGCTGGCGGCCGCCGCTCAGTCTGGTAAACTCCTCACTTGGGGTTCTGCTGATGATATGGGCCAAAGCTATGTGACTGCCGGGAAGCATGAGGAAACTCCAGAAGCTTTTCCACTTCCTAGTGACGTGGCAATAGTGAGAGCTGATGCTGGATGGGCTCATTGTGTTGCAATAACTGATGAAGGGGATGTCTATACATGGGGTTGGAAAGAATGTGTTCCAACAGGAAGGGTCATTTCTGACCAATCTTCAGGTGGAACTTTGGAAAAAGATGAAAGACAGAGTGCGATTGCCGCTGACCAAGTGAGCCCCAGGTCGCAGGTGTCTAGGACAAGTAGCGGAGCAGCATCTGGTCCTTCTGAAAGTAGAGGTACTGATGATAGCACGAAGAGACGAAGGTTGTCTTCAACCAAACATGCACCCGAAAGTTCAACGTCCAGTGATGAAAACCTTTCAGCACCCCCTTGTGTAGTGACATTTAATACAGGAGTTAAAATAATGGCAGTAGCTGCTGGTGGTCGTCATACATTAGCACTATCAGATTTAGGCCAAGTATGGGGTTGGGGCTATGGAGGAGAAGGGCAACTAGGCCTGGGTTCTAGAATCCGGACTGTTTCCTCTCCACATCCTATCCCGTGCATTGAATCAGCATTGTACAGCAAAGATCGGCCAGCAGCTATGAAAGGAAACAAAAGTGCTGAAGCGCAGATTAGCAAAGTCATGGGAAATTGCGTGAAGGCCATTGCATGTGGGGGTCGCCACAGTGCTGTAGTAACAGATTCAGGAGCACTACTTACATTTGGATGGGGACTGTACGGACAGTGTGGACAAGGAAACACAGATGATGTTTTAAGTCCAACGTGTGTATCGTCTATCCTGGGAGTCAAGATGCAAGACATTGGTGCAGGGCTGTGGCACACTGTATGCACATCTGTAGATGGCGATGTCTATTCCTTCGGAGGAAACCAGTTTGGGCAGCTGGGCACTGGTTCTGATCAAGCTGAGACTGTACCAAAACTGGTAGATGCCTCAAGCTTGGAGAATAAGAATGCACGAGCTGTTTCTTGTGGAGCTCGTCATAGTGCAATAATAACTGATGAAGGCGAGGTCTTCTGCTGGGGATGGAACAAGTACGGACAGCTCGGTCTCGGCGATTCCATGGACAGAAACGTGCCTTGCAGTGTTCCTGTCGACGCATACCACCCACTGAATGTGTCGTGCGGTTGGTGGCACACCTTGGTGCTCGCGGAGTCCCCTACTTAA</cdnaseq>

Protein Sequence

<aaseq>MASWRIGWLAAAAQSGKLLTWGSADDMGQSYVTAGKHEETPEAFPLPSDVAIVRADAGWAHCVAITDEGDVYTWGWKECVPTGRVISDQSSGGTLEKDERQSAIAADQVSPRSQVSRTSSGAASGPSESRGTDDSTKRRRLSSTKHAPESSTSSDENLSAPPCVVTFNTGVKIMAVAAGGRHTLALSDLGQVWGWGYGGEGQLGLGSRIRTVSSPHPIPCIESALYSKDRPAAMKGNKSAEAQISKVMGNCVKAIACGGRHSAVVTDSGALLTFGWGLYGQCGQGNTDDVLSPTCVSSILGVKMQDIGAGLWHTVCTSVDGDVYSFGGNQFGQLGTGSDQAETVPKLVDASSLENKNARAVSCGARHSAIITDEGEVFCWGWNKYGQLGLGDSMDRNVPCSVPVDAYHPLNVSCGWWHTLVLAESPT</aaseq>

Gene Sequence

<dnaseqindica>1..40#1196..1269#1354..1438#1536..1661#1763..1999#2093..2329#2946..2989#3473..3655#4358..4448#4970..5013#5095..5217#ATGGCGTCTTGGCGCATCGGCTGGCTGGCGGCCGCCGCTCGTGAGTCTCGTGGCCCCTCGAGCGGTCAAGCCACGGAGGGAGATAAGAAACTCATGATGCGTAGACGAGGTTCGTCACCGGAGCGTGCAGGGCCGAATAATAAACGAGCGCGCACCAAAGCCAGTGCACGGCTGCACGCTGGTCACACGTTCTCACCGCGAGCCTGTGTGTTTACCATTCGATCGGGTCATGTGTGGAGCCAAAAAATGGTTTCGATATTTAGAATATTATTTTAAGGATTAGTTTTACATAAGCAGCTATCTTTTACATTCTAACCCTTTCGAAAAACATATTTCAGAAATGGACGCAAAACTCTACACTAGATATTGTTGACGCCGAAGTTAAACCGCCCACGAGACAACCCACCCTAGTCTGATTGGCATGGGTGAAAAATGTTGTGCGCATAACGAACTACAGTACCGTGTGGATTTCTATTAAAAATATCATGAAATTTATGTATTCCAGACATATAAATCGCACATTAGTGCATATGCCTTTCAGATAAAACATGGTGTTATCAATCGGTGAATCTACTGCACGCCACAATTACGCTACTAAAAGTACTCTTTTATGTATTCATTTTTTTTTTTGGAACTGGATATAGTTGAACTATTTAAGTTTTTTTATGACAAAATCTACTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGAATGTGTGAAATGGGGATTTGTTTGTCGAGAGCTATATAGTGAAAGAAGATGAATACACAGCTGAAATTTGTTAAATTAAGTGTATTTCTGAATTTTCTGAGACCTTATTCGTGTGATACCCAGAAACAACGATAAAAAATCGTGTGATCGAGGAGAGGTGAAAGAAGAACGTCATATCATGTTCTTAGTTGCCTCTAACATGATCACACGAGTGACCTTTTAATTCATTTTGTTCGGTTGACCGTGATGGGGAATTTGCATTCTTGTTGGCCGGCCCCACGAATTAATTTGATGTACCAAATCAGAGTGTTCGAATTAAAACTATTAGTTCAGGAGATTGTATGTGCTCAGACTCAACAATATGCCAATAGAAACGAGCTTTCTCTGAAAATTTCTGTAATCGGTTGCTCACCATGTTCAAGATAAATTTGATACTAAACTGGGGTTTTTATTTGGATCAGAGTCTGGTAAACTCCTCACTTGGGGTTCTGCTGATGATATGGGCCAAAGCTATGTGACTGCCGGGAAGCATGAGGTAAAAATGCTACCCGTATCTGTATTGATGCTTTATGCTCTCATCACTCGGAGATATTTCTAAGGACAATTTTGTACTTCTCAGGAAACTCCAGAAGCTTTTCCACTTCCTAGTGACGTGGCAATAGTGAGAGCTGATGCTGGATGGGCTCATTGTGTTGCAATAACTGGTATACTACTAGTTGAACATACATAGCGTACTTTAGGACAGCAAGAGCTCATAATTTTTGTGTTACTAGTAATTTCGTAAATGTCATACTGGACCAGATGAAGGGGATGTCTATACATGGGGTTGGAAAGAATGTGTTCCAACAGGAAGGGTCATTTCTGACCAATCTTCAGGTGGAACTTTGGAAAAAGATGAAAGACAGAGTGCGATTGCCGCTGACCAAGGTGGTGATGATTACTGCCTACCTAGTTTCATTTGCGCCTAAAAAGTATAAGCTTCTCTACATCAATTGTTTTCAGATATAACAAAGGCAACTCCATTACAGTGAGCCCCAGGTCGCAGGTGTCTAGGACAAGTAGCGGAGCAGCATCTGGTCCTTCTGAAAGTAGAGGTACTGATGATAGCACGAAGAGACGAAGGTTGTCTTCAACCAAACATGCACCCGAAAGTTCAACGTCCAGTGATGAAAACCTTTCAGCACCCCCTTGTGTAGTGACATTTAATACAGGAGTTAAAATAATGGCAGTAGCTGCTGGTGGTCGTCATACATTAGCACTATCAGGTAGCCTACATTTTGCACTAACACTATGGCACTACATTTGCTGGGCTAGGGAACTTTGCTGATTAAAACTAAATGTTTTCTCGAAAGCTTCAGATTTAGGCCAAGTATGGGGTTGGGGCTATGGAGGAGAAGGGCAACTAGGCCTGGGTTCTAGAATCCGGACTGTTTCCTCTCCACATCCTATCCCGTGCATTGAATCAGCATTGTACAGCAAAGATCGGCCAGCAGCTATGAAAGGAAACAAAAGTGCTGAAGCGCAGATTAGCAAAGTCATGGGAAATTGCGTGAAGGCCATTGCATGTGGGGGTCGCCACAGTGCTGTAGTAACAGGTAAGCCCTTTCTTTCAAGCTCACTCTGGGAACCTTTTATCCTACTTATTTAAAGTTGATGTCGATCATATATGATCTTAAGGTGGTATGTGTGAATACCTCAGTTGGGTCGGTTTTTTTCTTGTGGATGACAATACATACTTTCAAATTGGTAGTTCAGTTTGCTTTGGTACAGTATAAAGTAATGTTTTGTGATGTAGTATTACGAATTTACAAGAATGGACAACATGCTTTTTTTCATGTTTGCTTTCACATAGAAAATAGTTGGTGATCAGAGGCAACAAGGTGCATTGCTTGATTGGACCATATATTGTAGTTAACTTTTAAGTAACTACGATATTATGTATATGAGATTTTCTGTGTAAAATCACCAAAGAACATGTTCCAAAGAAGTTACTTTAAATCCAAGGATGTGCACAAAAGTCTAATAATCAAAACTGCAGATCTAGACGAGTTACTTCTAGGAGGAATTTCAATTCAAACCAAAATATTAGCAACTGTTCAGCTCTGTTCATATCTTCTAGTGAATTCCAACCTGCTTTTACAACACAACATGGAACCCTAAATTCTAGTAAAAATTTTGGCCCTGCACTTTTAACAGCTAGTTCTTTTGCAGATTCAGGAGCACTACTTACATTTGGATGGGGACTGTACGGACAGGTTAGTGCTTCTACCATAGCATATCAGTTGGACCAAGCTTGTGTGAGATTTCAAAGCATCATTTGCATGACTAAACACATCCAAGTAGCTAGGAAAATAAATATGTATTCAAGGGATGGAGAAGTGTATGATTTGTTTTGGGTAATCCATCTATGTATTCAACAAGATTAGGCATTGAAGAGTTGTTTGTACTTGCTTTCCGACTGAACAAGTACACAGCAAACTTATGCTACAATTTAATTTGGTTTACATGTGATATGTAGTTTCATTGAAAGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTTTTCAACTTTGACATCTTCCATAACAACGGTGATGACAGTTCTTGCTCACTCACTTGACACTATTTTGGCATGGTATATATTAGATTTTTCCCCCATTTTGAAACCTATGAGTAGGAGCAACAAAAGTTCTGTTGCACTAGTGCTCTTAATTATTGTATGATTTATTCTTCAGTGTGGACAAGGAAACACAGATGATGTTTTAAGTCCAACGTGTGTATCGTCTATCCTGGGAGTCAAGATGCAAGACATTGGTGCAGGGCTGTGGCACACTGTATGCACATCTGTAGATGGCGATGTCTATTCCTTCGGAGGAAACCAGTTTGGGCAGCTGGGCACTGGTTCTGATCAAGCTGAGGTACAAATTCTATTGAGTAAAGTGCATTGGCGGTCCTTAAACTTGTAGGGTTGTGTCATATAGGTCCCTAAACTCTCAAAATGCATATCTAGGTCCCAGAACTTGTCAAAGTGTCCCAAATCGACACATCCCCTCTAAGATCTACGTGGCGCTGATGTGGCATGCCATATGGACGTGACGTATCCTTTTCTTTTTTTCTTTTTTTCTTTTTCTTTTTTGTTTTCTTCTCATTCTTCTTTTTTTTCCCTTTCTTCTACTCGGGTCACAGAGAAAGGAGAAGAAAGGGAAAAAAGAGAAGAAAAAATAAAAAGGAAAAAATTTAAATGGGTCTCATTTGTCAATCAAAATGATGCCATGTCATGTCCGTGTGGCATGTCACATCAACGCCACGTAGGATACTGAAGAGTTTGTGGCGATTTGGGACTTAGATAACACACTATGACAAGTTCTGGGACTTGGATATGCATTTTGAGAGTTTAGGGACCTAGATGACACACCCCTACAAGTTTAAGGACCGCCCGTACACTTTACTCAATTCTATTCTTTTCGATGTTAATGGAGGTTAATTACATAAAGTAAGTTTAGGGAAAATAACTACAGTTAACATAATGATTGCCTCCCAAAATGGAGTTAGCTGTATGTGAGGTGCATGTTTACTCAGTAAGTGATAACCATAAGTATATTGCTTTTTTTTTTATGCAGACTGTACCAAAACTGGTAGATGCCTCAAGCTTGGAGAATAAGAATGCACGAGCTGTTTCTTGTGGAGCTCGTCATAGTGCAATAATAACTGGTACCTTTGACTGTACTAGTATTTTTCCCCTAGAAGGAATTTGCTATCCTATCTGTCTAATATAACTGCATATTAATAAAATGCTCTTCTCATGCTCATTTAAATCAAGGAAATATTTCTGGCAAGGGTTTGTTGAATAAACCCAATTATCCAAACAAGACCTTTAGGGTTTGTTGAAGAGGTAGAGATTATACTCGATCCCTTAGAAAGCCATGAGTATTTTAGTTTAATCTGTCTGCCAACCGAACGTACTGAGCCTAATCCCCATATAAGCAAGCCCTATTGAATCTTCCTAGATATTCTGATGTGTAATCATATTATGAGTCACTGTAGTTATTAGCGTATTATCAGTAACTTGTGCTTGGAAAGTTGGAATTCTACAATAAGCTGTTCCATGTGTGATTGAAGTACTTAAATTCTTGTTAATCTTTGGCCTCCCTGACAATTTGTTTAAACATGCCCGTAGAAAGTGGTGTTCCTGGTCTAACATCTACTGACAAAATGTGGTGACATTTATGCAGATGAAGGCGAGGTCTTCTGCTGGGGATGGAACAAGTACGGACAGGTGCGTATTCAGCTCTGCACTTGGAGAAGAAAAACATTCACCGTTGCAGTTCTTTTTATAACTTTTGAGTTGCGCGTGCAGCTCGGTCTCGGCGATTCCATGGACAGAAACGTGCCTTGCAGTGTTCCTGTCGACGCATACCACCCACTGAATGTGTCGTGCGGTTGGTGGCACACCTTGGTGCTCGCGGAGTCCCCTACTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA004794

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA004794&oldid=42518"