BGIOSGA004824

From RiceWiki
Revision as of 11:12, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA004824| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA004824, complete gene.| tag = B1096A1...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA004824

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA004824, complete gene.

LocusTag

B1096A10.44

Ensembl Transcript ID

BGIOSGA004824-TA

Ensembl Protein ID

BGIOSGA004824-PA

Length

2064

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:40415766..40417829

Sequence Coding Region

40415766..40416070,40416158..40416284,40416984..40417829

Genome Context

<gbrowseImage1> name=IndicaChromosome01:40415766..40417829 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:40415766..40417829 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGATGGGATCTGGGATGCCGCATATGTACTTTGCAAGCTCTAGCCATGGCACCGGTGCCCACTACCAAAGTCCTGGTGGTGCTCCCATCACCATGGCAGTCCCGGACATGGGGTTTCTTGTTGCAGGGATAGGCATGGCTCCATCTAGCTTTGTGATGCCAGAGGGGGCCCTAGCAGCTAGCTATAGCGCCATGGCTACCGTTCCAGTAGGGGTTGTTGTTCCTCAACAGCAGTCGTCACGATTTGGGGGCAACAATGGTAACCCTGGGTCGTTCAAAGGAGCATGGACAAGGCAAGAAGATGAAGTTCTCAAACAAATGGTGATACTCCATGGAGATCGTAAGTGGGCAACGATTGCAAAGAGCCTCCCAGGTCGGATCGGGAAGCAATGTCGCGAAAGATGGACCAATCATTTGCGCCCAGACATCAAGAAGGACGTCTGGACTGAGGAGGACGACAGGATGCTGATCGAAGCACACAAGACTTATGGGAACCGTTGGTCAGTAATCGCAAGATGCCTCCCTGGCCGGTCGGAGAATGCTGTCAAGAACCATTGGAACGCGACTAAGCGGAGCCTGAAGTCGAAGCGTCGGATGAAGAAGAAGAGCGTGCAAGTGGTGAATTCACCGCCGGGGCAGCTCTCCCCCCTTGAAGAGTACATCCGCAGCCAGTACCCGTCGGCCGTTGAGACCACACCGCTGCCACCGGCCGTGCCTGCACCGCCTTCCGACGTCATTGTGCACGGTGCCGGATCGGTCAGCGCAGGTCCAACCGTTGCCACACAGGAGCCCACCGGCACCAACCCATCGGAAATGGGGATCTACCTTGGCCTGGGTAACCCGGCTGGACCGACCACCCAGCAGCTAGCGGCGATGAACCTGAACATGTCACTGGCGCCGGACCTCAACGCCTACAACGATCAGCGAGAGGGGTACTACCTCCCGTTCGTCCCGCAGGGCAACCTGCACTATGGGATGCATGTGCCGGCACCGCCGGTGCAGCAGCAGCAGCAGCAAGGGATTAGCGTTGATCAGGGCCTGCATTCTTCTTGCCTGAGCCTGTACCACCCGTTCCCGGGAACCCACCCGGTTAGCCTGGATTTCGGTTGCCAATCCAGCAACCATGCCAACGCAGGTGGCTACTACAGTGAAGCTGGCCCAAGCAGCGGCAGTGGCAGCGGCGACCCTGACGACGTCGACGTCATCCAGATGGCCTCCAGGCAGTTCCTGATGCCGTCCGAGGCTGAGGTCACTCTCGACCTGACCAGGTTCAAGTGA</cdnaseq>

Protein Sequence

<aaseq>MMGSGMPHMYFASSSHGTGAHYQSPGGAPITMAVPDMGFLVAGIGMAPSSFVMPEGALAASYSAMATVPVGVVVPQQQSSRFGGNNGNPGSFKGAWTRQEDEVLKQMVILHGDRKWATIAKSLPGRIGKQCRERWTNHLRPDIKKDVWTEEDDRMLIEAHKTYGNRWSVIARCLPGRSENAVKNHWNATKRSLKSKRRMKKKSVQVVNSPPGQLSPLEEYIRSQYPSAVETTPLPPAVPAPPSDVIVHGAGSVSAGPTVATQEPTGTNPSEMGIYLGLGNPAGPTTQQLAAMNLNMSLAPDLNAYNDQREGYYLPFVPQGNLHYGMHVPAPPVQQQQQQGISVDQGLHSSCLSLYHPFPGTHPVSLDFGCQSSNHANAGGYYSEAGPSSGSGSGDPDDVDVIQMASRQFLMPSEAEVTLDLTRFK</aaseq>

Gene Sequence

<dnaseqindica>1..305#393..519#1219..2064#ATGATGGGATCTGGGATGCCGCATATGTACTTTGCAAGCTCTAGCCATGGCACCGGTGCCCACTACCAAAGTCCTGGTGGTGCTCCCATCACCATGGCAGTCCCGGACATGGGGTTTCTTGTTGCAGGGATAGGCATGGCTCCATCTAGCTTTGTGATGCCAGAGGGGGCCCTAGCAGCTAGCTATAGCGCCATGGCTACCGTTCCAGTAGGGGTTGTTGTTCCTCAACAGCAGTCGTCACGATTTGGGGGCAACAATGGTAACCCTGGGTCGTTCAAAGGAGCATGGACAAGGCAAGAAGATGAGTAAGTAATAGATCAATCGACTTCTAGTGAGATTTTATTTTTCTCACTAACAAGATTTTTTATATCTATGTGTTAACTTGTTTTCAGAGTTCTCAAACAAATGGTGATACTCCATGGAGATCGTAAGTGGGCAACGATTGCAAAGAGCCTCCCAGGTCGGATCGGGAAGCAATGTCGCGAAAGATGGACCAATCATTTGCGCCCAGACATCAAGGTTTTACTCTTAACTTCTTGATTCCTAGATTATTATGTAGATCTAAGGGGGTTTCTTCATCCATGTGATTTTGAGGGGTGATTTCTTTTTAGATTTACATTAAAATCATGCTAAGCAGTATTCTAGCATAGGGATTATCGAAATAATTCATTTTGTTGCGGTTGTTGTGTATGCTAATCTTAATGTTCTAGGCACCGAGTAATCCAAGAGGGATAATCGAAATAATTCATTTTGTTGCGGTTGTTGTGTATGCTAATCTTAATGTTCTAGGCACCGAGTAATCCAAAGCCTCCGTTTTATATGATGTTTTTAGGACTAGAAAATCAGTAGATCTTGGGCTACAAGATCAAAGATTCAGACTCATCATGTCCCTGCAGGAAAAAAAAAACAAAGGCAAATCTGTCCAAAATTGTACCTACTTCAATTAATGCGTATTACATTTTATAAGGTTAAATCTCTTCTTGATTTATAAATACGGAGTAAACAACAACAGTGTTATACAACACCCTGCATGAATATGGTAGCCGTTAATGATCATATATAGATATATTTTTCTATCCTTAATAAATGTACTGCTTAGATTTAAATTATGCCAACTATGTACCGATCTTAGAAGGTTCGAGGGCATATTTTCTTGTGTTGTGTCGCCGATTGCGTGGATGAAATTAGTATTCAAAAACTGTACAATTTATACTGCAGAAGGACGTCTGGACTGAGGAGGACGACAGGATGCTGATCGAAGCACACAAGACTTATGGGAACCGTTGGTCAGTAATCGCAAGATGCCTCCCTGGCCGGTCGGAGAATGCTGTCAAGAACCATTGGAACGCGACTAAGCGGAGCCTGAAGTCGAAGCGTCGGATGAAGAAGAAGAGCGTGCAAGTGGTGAATTCACCGCCGGGGCAGCTCTCCCCCCTTGAAGAGTACATCCGCAGCCAGTACCCGTCGGCCGTTGAGACCACACCGCTGCCACCGGCCGTGCCTGCACCGCCTTCCGACGTCATTGTGCACGGTGCCGGATCGGTCAGCGCAGGTCCAACCGTTGCCACACAGGAGCCCACCGGCACCAACCCATCGGAAATGGGGATCTACCTTGGCCTGGGTAACCCGGCTGGACCGACCACCCAGCAGCTAGCGGCGATGAACCTGAACATGTCACTGGCGCCGGACCTCAACGCCTACAACGATCAGCGAGAGGGGTACTACCTCCCGTTCGTCCCGCAGGGCAACCTGCACTATGGGATGCATGTGCCGGCACCGCCGGTGCAGCAGCAGCAGCAGCAAGGGATTAGCGTTGATCAGGGCCTGCATTCTTCTTGCCTGAGCCTGTACCACCCGTTCCCGGGAACCCACCCGGTTAGCCTGGATTTCGGTTGCCAATCCAGCAACCATGCCAACGCAGGTGGCTACTACAGTGAAGCTGGCCCAAGCAGCGGCAGTGGCAGCGGCGACCCTGACGACGTCGACGTCATCCAGATGGCCTCCAGGCAGTTCCTGATGCCGTCCGAGGCTGAGGTCACTCTCGACCTGACCAGGTTCAAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA004824