Os11g0535600

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Revision as of 09:12, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0535600| Description = C2 calcium/lipid-binding region, CaLB domain containing protein| Version = NM_001189647.1 GI:297728424 GeneID:9270214...")
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Gene Name

Os11g0535600

Description

C2 calcium/lipid-binding region, CaLB domain containing protein

Version

NM_001189647.1 GI:297728424 GeneID:9270214

Length

1468 bp

Definition

Oryza sativa Japonica Group Os11g0535600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:21351582..21353049

Sequence Coding Region

21351830..21352873

Expression

GEO Profiles:Os11g0535600

Genome Context

<gbrowseImage1> name=NC_008404:21351582..21353049 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:21351582..21353049 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgaccgccggcggcggcggcggcggccggcgggtcaccatcaggtccatctcctgcaggggcgtcaaggcgttcgtccccttccagaagccgccgctctacgccgccgtgtcgctcgccggccgccgggagaagacgagcggcgaccccgacggcggggagaacccggactgggacgccgccgtcttcgccttcgacctccccgccgccgcggatggtatgctgcagttcgaggtgaaggcgcaggtgccgctgctcgggagcaagctcgtcggcaaggtgtccgtgccgctggcagacctcgccgtcgccggcggcgacggcgcggcggcggcgccgaggcacgtgagctaccaggtgtgcgcccccgacggcaaggcgaacggcaagctcagcttcaccttcgccgtcaccggcggcggcgcgtaccagcagccgcaggtggatcatccaactccaatctcctcctcttgctgcgcgccaccgccgacgtcgacgacgacgacgacgtcgggtgcgccgtatccgcctccggcgatggcaagctacccgccgctgccatcgctgtccgcgacaccgtcagcttcactgtacccaccgccgccgccgagcagctaccctcctcctccaccgccgccgccgccgccgcctcacgtgacgcaaagcttcgcaccaaacagcagctacccgccgccgcctcctccgtcgcagtacatcgccggctacccgccgccaccaccgagcaacttctacccgccaccgccggcaggctacccggcgcccagtttcccctctccgacgagcacctacccgccaccgccgccgccggagtcagcctcatcgcagtatccaccaccactgccaagatcggcgccatgctgcgatcgctcggtggaccgtgcgctgccgtcgtacatgtcgccgcgtccgccgccgcccggcgcgccgtgctaccccccgccggcggcgtggttgccggatcaagaagcggcgggagcgccgtacagcttgtacccccaacccgggactcgctacttgtag</cdnaseq>

Protein Sequence

<aaseq>MSTAGGGGGGRRVTIRSISCRGVKAFVPFQKPPLYAAVSLAGRR EKTSGDPDGGENPDWDAAVFAFDLPAAADGMLQFEVKAQVPLLGSKLVGKVSVPLADL AVAGGDGAAAAPRHVSYQVCAPDGKANGKLSFTFAVTGGGAYQQPQVDHPTPISSSCC APPPTSTTTTTSGAPYPPPAMASYPPLPSLSATPSASLYPPPPPSSYPPPPPPPPPPP HVTQSFAPNSSYPPPPPPSQYIAGYPPPPPSNFYPPPPAGYPAPSFPSPTSTYPPPPP PESASSQYPPPLPRSAPCCDRSVDRALPSYMSPRPPPPGAPCYPPPAAWLPDQEAAGA PYSLYPQPGTRYL</aaseq>

Gene Sequence

<dnaseqindica>249..1292#attgcatccagaaatgaaagtaaaaaaaaatattaggaacagttaaaaatcaggcagccaaagaacacagtaacagcatatactatctgctccccaattgattgattgcacctagatccaatatcatccaaataaacaaaagagcacaaggtcaaatctttagccaccaagatcccatcagccacaaatcgatccatctccaagctcaaaatcccaattctttccaagaaagatttttctcggaggccatgtcgaccgccggcggcggcggcggcggccggcgggtcaccatcaggtccatctcctgcaggggcgtcaaggcgttcgtccccttccagaagccgccgctctacgccgccgtgtcgctcgccggccgccgggagaagacgagcggcgaccccgacggcggggagaacccggactgggacgccgccgtcttcgccttcgacctccccgccgccgcggatggtatgctgcagttcgaggtgaaggcgcaggtgccgctgctcgggagcaagctcgtcggcaaggtgtccgtgccgctggcagacctcgccgtcgccggcggcgacggcgcggcggcggcgccgaggcacgtgagctaccaggtgtgcgcccccgacggcaaggcgaacggcaagctcagcttcaccttcgccgtcaccggcggcggcgcgtaccagcagccgcaggtggatcatccaactccaatctcctcctcttgctgcgcgccaccgccgacgtcgacgacgacgacgacgtcgggtgcgccgtatccgcctccggcgatggcaagctacccgccgctgccatcgctgtccgcgacaccgtcagcttcactgtacccaccgccgccgccgagcagctaccctcctcctccaccgccgccgccgccgccgcctcacgtgacgcaaagcttcgcaccaaacagcagctacccgccgccgcctcctccgtcgcagtacatcgccggctacccgccgccaccaccgagcaacttctacccgccaccgccggcaggctacccggcgcccagtttcccctctccgacgagcacctacccgccaccgccgccgccggagtcagcctcatcgcagtatccaccaccactgccaagatcggcgccatgctgcgatcgctcggtggaccgtgcgctgccgtcgtacatgtcgccgcgtccgccgccgcccggcgcgccgtgctaccccccgccggcggcgtggttgccggatcaagaagcggcgggagcgccgtacagcttgtacccccaacccgggactcgctacttgtagatgatgaattctgctaaattgatttgagctttgcgtatatcacaaattcacaagttgaattgaattctgcttttcatcaaaagaaaaggaaagagttggattcgatctgtaaattaactgtgaatgctttaatcgccaggacgggaacaatgaattgatcttgtggatttgtgagc</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0535600, RefSeq:Os11g0535600