BGIOSGA004839

From RiceWiki
Revision as of 11:12, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA004839| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA004839, complete gene.| tag = P0679C1...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA004839

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA004839, complete gene.

LocusTag

P0679C12.18

Ensembl Transcript ID

BGIOSGA004839-TA

Ensembl Protein ID

BGIOSGA004839-PA

Length

3017

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:40712313..40715329

Sequence Coding Region

40712313..40712317,40712939..40713158,40714047..40714216,40714315..40714376,40714701..40714906
,40715276..40715329

Genome Context

<gbrowseImage1> name=IndicaChromosome01:40712313..40715329 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:40712313..40715329 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAGTAAGTTGCAGAGTGATGCTCTTAGGGAGGCAATCTCACAAATTACTAGTGAATCCCGCGAGAAGCAGCGCAAGTTCGTGGAAACCATTGAACTGCAGATTGGACTGAAGAACTATGACCCTCAAAAGGATAAGCGTTTCAGTGGATCTGTTAAGTTGCCTCACATCCCCCGCCCTAAGATGAAGGTGTGCATGCTTGGTGATGCCCAGCATGTTGAAGAGGCAGAGAAAATGGGCCTAGACTATATGGATGTGGAAGCTCTCAAGAAGATGAACAAAAACAAGAAGCTGGTTAAGAAGCTTGCAAAGAAATATCACGCTTTCCTTGCATCTGAGGCCATCATTAAGCAGATTCCTCGACTTCTTGGACCTGGTCTTAACAAGGCAGGCAAGATTTTACTTGTTTATGGGAGGTCTATATTGAAAAGCAGCTACATAATTGTGTCCAAACGAGGCAAATTCCCAACGTTGGTGACTCACCAGGAATCACTTGAGTCCAAGGTTAACGAGACTAAGGCTACAGTGAAGTTCCAACTGAAAAAGGTTCTTTGCATGGGTGTTGCTGTAGGCAACTGTGCTATGGAGGAGAAGCAAATTTTCCAAAATGTGCAAATGAGCGTGAACTTCCTTGTCTCTCTTTTGAAGAAGAATTGGCAGAACGTGAGATGCTTGTACCTGAAGAGCACTATGGGAAAAGTGATCCGGGTGTTCTAA</cdnaseq>

Protein Sequence

<aaseq>MSKLQSDALREAISQITSESREKQRKFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKVCMLGDAQHVEEAEKMGLDYMDVEALKKMNKNKKLVKKLAKKYHAFLASEAIIKQIPRLLGPGLNKAGKILLVYGRSILKSSYIIVSKRGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNCAMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKVIRVF</aaseq>

Gene Sequence

<dnaseqindica>1..5#627..846#1735..1904#2003..2064#2389..2594#2964..3017#ATGAGGTACGGATTCACTCCCTCGTCGTGGCTGCGTGCTGCTTTGTATGCGAGCAACGGAGAAGTAGTTCCGCGCTGCTGCTGCTGCTAATGAAGCGATGTTATGGCTATCAATCTGTCTGGTTCTGGTTCGCGTTTTATAGCAACGTATATGTTGTCTAATCTGTCGGCTGGTTTTGCCGTTGTTTGCGCTCGAATCTGGCGTCTGATGTGTGATGTGTCTATGCTTTACGAATAGATTACAATGAATGTTTCAGTGTGAGATGTGGGCGGTCTTTATAACTCTTGTTAACTTCAGTTATCGAATTAGATCTTTTTATTTTAAAGGCAAACTGTATGCACTATAACTGGGAGTAGCAGCAATCTGAATTCAGTGTAAGAACTCTGCTGCAAACTTTTTTCAATGATCAACTCCAGATTTTGGGAATTTAATGGGAAATCTCTAGTTATGCACTTTCTCATTCTTTTAAGTATTTATGCATTTGCGTAAGCTTGTTACTTTCGAAATGGCCTTTCATGCTAGTTGATTTGGTGCTCTGTGTAAAGCCAAACCATAGGCATTTATTTTAGTATGCAACATAACCATGCTTAATCATGCCATTAACTTGTTTTAATTTTGTGTTTCAGTAAGTTGCAGAGTGATGCTCTTAGGGAGGCAATCTCACAAATTACTAGTGAATCCCGCGAGAAGCAGCGCAAGTTCGTGGAAACCATTGAACTGCAGATTGGACTGAAGAACTATGACCCTCAAAAGGATAAGCGTTTCAGTGGATCTGTTAAGTTGCCTCACATCCCCCGCCCTAAGATGAAGGTGTGCATGCTTGGTGATGCCCAGCATGTTGAAGAGGTATTGTACTCTTTTATCAGTTTTGCATCAACTTCCTTGTGTACATAACAGATTGTGCTTTAGTAATAGAAAATTGTTGATAGGCTTCTACAATGAAGGGCAGATATATTTGATCCTAACTTGGTATATAGTAAATGATGTTTTTTTTTTCAGTTAGGATCAAATATATCTGCCCCTTCATTGTGCTTTATGCAGTTGCCTTTACTTTTGCTGTCAACATGTACCTTGCTGCCAAAACTTTGAATAGTTAGTTACTTACACCCATTTGCTACTACTCCATGCTACGAAAGATCTATGTTCTGGATACTAAAAGGGGAGCGTATCCTATGCACACAGGCCCTCGCGTGTACACACCGTGTACACCAACTAAAAATTATCACAAAAAATTCTAGGAAAATTCATACATGTACTTTCAATAGTATTACATCTACGTGCAAAGTCGCATCTTCAAATTCATTCTACATAGAGAATAACAAAAAAGATAAAATTTTGACAAAATTACAACCTTTAAAACTGTCAGATTTTTTTGTTTTTTTTGTTACGGCTAAAATATAATGAATTTGATGTTAAGATTTTAACCCTAAGTGTAATACAATTGAAAGTATGGGTATGATTTTTTCTAGATTTTTTGGTGACATTTTTTAGTTGGTGTACACGTGTGTACACGTGAGGGCCTGTGTGCATAGGATATGTTGCCTACTAAAAGGTGTTTAGTATAATCCTCAAAGTAAACATGTTATATTCTTTTGTGAAAACACTGTATACTGTATCTCCATCGCTCCTTGATGCGAAAATCAGGAATACCTTCTTCCATGGAGTGTTCCATGCTATTTGCCCTGCATACGGATGCTGATGTTTCTTTTCTCTGTTACCAATGCTATTGTGCAGGCAGAGAAAATGGGCCTAGACTATATGGATGTGGAAGCTCTCAAGAAGATGAACAAAAACAAGAAGCTGGTTAAGAAGCTTGCAAAGAAATATCACGCTTTCCTTGCATCTGAGGCCATCATTAAGCAGATTCCTCGACTTCTTGGACCTGGTCTTAACAAGGCAGGCAAGTATCTTGTTCCATCTATTGCACTACCATGATAGCTGTTGGACTTGAGTTGTTGGCAATCATAGACAGCTGGCTAACTTCTGCTGATATGTTCTCAAGGATTTTACTTGTTTATGGGAGGTCTATATTGAAAAGCAGCTACATAATTGTGTCCAAACGAGGTTCCTGGTTTCAAATTGTCCATTGAGTCTCAGGTCCATATACTGTACTAGTAGATGATTTCTAAACTTAGCTACTTGCATCACTGTTCTTTTTTGAAACACCTATTGGTTGTGATGACATTGGTTTTTGAGGAAATTAGTTGTTTTGCTTTGCTTAGAAACAATGGGATCAATATTCCCAATTGGCCAACAATTTAGCATGTGGCCAAATTGCATAGACCATGTAGGGTACCTCCCAAGGACCAGAGACAATTTAGTAACTTTTTTTTTTAAAAAAAGAAAAGTCTGCTTTCATGTGATGCTTTGCTGTGTGATCTACTGCAGGCAAATTCCCAACGTTGGTGACTCACCAGGAATCACTTGAGTCCAAGGTTAACGAGACTAAGGCTACAGTGAAGTTCCAACTGAAAAAGGTTCTTTGCATGGGTGTTGCTGTAGGCAACTGTGCTATGGAGGAGAAGCAAATTTTCCAAAATGTGCAAATGAGCGTGAACTTCCTTGTCTCTCTTTTGAAGAAGAATTGGCAGAACGTAAGTACTCCAATATTTTCTTTATAACACGTAGTACATGCAACATTTATCTACTCCCTTTGTTTCATATTATAAGTTGCATTTACTTCCTTTACTTTTTCCCTAATCAAACTTTTTTAGTTTGACCAAATAAATAGAAAAAATTATCAACATTTACAATACCAAATTATATTCATTAAATTTAGCATTGAGTATATTTTAATAATATGTTTGTTTGGGGTTAGAAATGTTGCTATATTTTTCTGTAATTTTGGTCAAACTTAAATAAGTTTTATTAAGAAAAAAGTTAACGACTTATAATATGAAACTAAAGTAGTATGTAACCTTGACTTAAACTAAGACTGATGATTGACATTTTAATGTATACAGGTGAGATGCTTGTACCTGAAGAGCACTATGGGAAAAGTGATCCGGGTGTTCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA004839