BGIOSGA004849

From RiceWiki
Revision as of 11:12, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA004849| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA004849, complete gene.| tag = P0423B0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA004849

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA004849, complete gene.

LocusTag

P0423B08.15

Ensembl Transcript ID

BGIOSGA004849-TA

Ensembl Protein ID

BGIOSGA004849-PA

Length

1364

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:40800708..40802071

Sequence Coding Region

40800708..40801189,40802047..40802071

Genome Context

<gbrowseImage1> name=IndicaChromosome01:40800708..40802071 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:40800708..40802071 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTCGCCGCCGCCGTCTCTCCGCCGCCCCGTCATCGGCTCCTTCGCCCACCGCCTCCGAGTCGCTGCCTCCTTCGCCCACCGCCCACGGTCGCCGCCTCCTTCACCCACTGCCCACGGTCGCCGCCATGCCTCCACCACTCCAGATCCGGGTCACCGCCTCCTTCCCGCCTCCACAACGCCAGATCCGGGTCGTATCGAGCCAAAGACGAAGACAACGCCGGTGCCAGGACCATCGGCGAACGGGGCACCACGCCGCTGCCCAACGCCATCGACAAGCCCCTCCGTCCATCGCCGCTTATCTCCGGTCGACGACGAGCTTCTACATCCCCCACCCTTCCCCTGACGGTCCCAGCAACCATGAACTCGGGGGCTCCAGATCCGGACACCCTGAACTCAGAGGTCGCGGATCCAACCATCCCGAGTTTGGGTGCTCCAGATCTTGCGCTCCTAGCTTCAGCGACGCCAGATCCGTTCGTGAGGCACTGGGGGCTGTACTTATGCTGA</cdnaseq>

Protein Sequence

<aaseq>MVAAAVSPPPRHRLLRPPPPSRCLLRPPPTVAASFTHCPRSPPCLHHSRSGSPPPSRLHNARSGSYRAKDEDNAGARTIGERGTTPLPNAIDKPLRPSPLISGRRRASTSPTLPLTVPATMNSGAPDPDTLNSEVADPTIPSLGAPDLALLASATPDPFVRHWGLYLC</aaseq>

Gene Sequence

<dnaseqindica>1..482#1340..1364#ATGGTCGCCGCCGCCGTCTCTCCGCCGCCCCGTCATCGGCTCCTTCGCCCACCGCCTCCGAGTCGCTGCCTCCTTCGCCCACCGCCCACGGTCGCCGCCTCCTTCACCCACTGCCCACGGTCGCCGCCATGCCTCCACCACTCCAGATCCGGGTCACCGCCTCCTTCCCGCCTCCACAACGCCAGATCCGGGTCGTATCGAGCCAAAGACGAAGACAACGCCGGTGCCAGGACCATCGGCGAACGGGGCACCACGCCGCTGCCCAACGCCATCGACAAGCCCCTCCGTCCATCGCCGCTTATCTCCGGTCGACGACGAGCTTCTACATCCCCCACCCTTCCCCTGACGGTCCCAGCAACCATGAACTCGGGGGCTCCAGATCCGGACACCCTGAACTCAGAGGTCGCGGATCCAACCATCCCGAGTTTGGGTGCTCCAGATCTTGCGCTCCTAGCTTCAGCGACGCCAGATCCGTTCGTGAGGTAAGTGGTCCGCCGTCCACACCACCCCACGTCGTCGAGGTCAACCTGCTGTGGGGAGAGCAGGCGTCGGCTGTCCCCTTCCACCCCATCCTCGGTAGTCACTGCCGCCTCATCTATTTTACTTAGTTTAGTGCTAAGCAGAAGTCACCCTTTCCTTCTCTTGCATCCAGATCTGAGCTTGCAGTCAACCGATTCCGGTGTCTCCTGTGGTTCCTGTGGCTAAATCCTTGTCCAAGGATGCATCTAGCTTTAACCCCATCAAAAATCATGAGCTATTGGATCATTAGTTAGATGCTCTTTATGTACTAGTATTTTGTTTGGATAGTGGGCATGCATGCTGTTTCGCTTTGTTTTCTTGTTCTATTTAAGTTGATGCATCACTAAATCTGTTTTTATTTTCCTTGTTAGACCTCTTACCAGAAGTTTTTTTTGGGTGTGTTCTTGGATACTCTACAAATCCCCCAATTTCTATGCTAGCTGAACAAATTAGACGCTAGTTCTTTCTACAAATGGTGAGCTTCCTCTGCCAGTTGATCTATTTCCGTTTCTTTCAGATAATATTTAACTACTGACATGCATATGGATGACTATCAAGGATGGTTGAAAGGCTAGCTAATGAATACTAATCTGAGGTAAACTTATTTTTGCCTTCTCAGTCAGAGTGACCCCATTTTAATTTGTTGTTTTGGAGCAGCTTATGCTGATTATCTAGCTGTTAGGCTATTCTTGCATAGTTATATGCATTTGTAACATATCGAAACTGTTCCTGCTACTGTCATCCCATCTGTAACATATATCTGGTTGTTAGGCTGTTAGGATATTCTTGCATTAAACTTCTCTGAATGATGTCATTGCAGGCACTGGGGGCTGTACTTATGCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA004849