BGIOSGA004859

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Revision as of 11:12, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA004859| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA004859, complete gene.| tag = P0505D1...")
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Gene Name

BGIOSGA004859

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA004859, complete gene.

LocusTag

P0505D12.13

Ensembl Transcript ID

BGIOSGA004859-TA

Ensembl Protein ID

BGIOSGA004859-PA

Length

5527

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:41010919..41016445

Sequence Coding Region

41010919..41011028,41011351..41011590,41011694..41011775,41012088..41012129,41012214..41012273
,41012949..41014565,41014665..41014766,41015748..41015888,41015979..41016104
,41016278..41016445

Genome Context

<gbrowseImage1> name=IndicaChromosome01:41010919..41016445 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:41010919..41016445 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGGCGCCGCCCCGCTGCGCGACTCCCTCCGCCGCCTCTGCACCGACGTCGGCTGGTCCTACGCCGTCTTCTGGAGGGCCACCCGCGCCGCCGACTCCCAGCGGCTGAAATTGGTGTGGGGGGATGGGCACTATGAGCGGGCGGCCGGAGCGCCGTCGATCTCCGGCTTCGAGGCCATGGACCTGCTGCTCAAGGAGAAGGCCGCGGCGTTGCGGAGCGGCACCGGGCGCGGTGGTGGCGGCGGCGAGGGGCACGCGGCTGATGGCGCCGCGGGACACAGCCATGACAGGGTGGACGCGCTCGTGCACAAGGCCATGGCGCAACAGGTCCACGTCGTGGGAGAAGGGGTGATTGGTCAGGCTGCACTGACAGGGTTGCATCGGTGGATCGTTCACGATATTGTTGATGAGTGTGAGGAAGAAGATGAGGTATTGCTGGAGATGAAGGGCCAGTTTTGTGCAGGAATACAGACAATTGCAGTGATACCTGTCCTTCCACGAGGCGTTATTCAGCTTGGCTCCACAAAAATGGTTATGGAGGAAGCAGCATTTATAGATCATGTCAGATCTTTGTTTCAGCAGCTGGGTAGTTCAACTGCAGTTGTTCCGTGTGGTTCCTTTGTACAAGATTCGATTATGAGAACTCCATTTCACAAATCACTTGGTGTGCCTACCTCTTCGCACTTGGAAGACCTTGCTGGTGGTGGAAATACTTATAATGATGACATGATTAACCACCAGTTCAGGCATCAGAAGTCACCAGCCTCGACAATCCAGTCATTTAACCCTGTACAACAGTTCTATGCTGGGCCTACTTTCTGTTGTCCAGTAACTATTGCATCACGTTGTGATCTCTTCCAACCTGACCATGGATCAACCTTTACTTTGAACAGTCAGTCAGAGGACAATAGATCGACAGCTTTACTCAAAAATAGTGTTTCACATTCTAAAACATCAAATGATGCCTTTTCACACGCTTTTAACCCCCTCAATGAACCCAACGTCTCCATTTCAGGCAGAAGAGAGTGTGTAAGCATAGAACAACATGGTTCTTGCCGTAATGGAGAAATGGAAATAACAATAGGCCGCACTGCTTCTTCAAGTTGTACAGGCAAAACAAATATTATCAATAAAGTGGATGATTTGCTGAGTCAGGATTGTTTGGTAGGTTGTCAGGCAAGCAATGCCACATCTGTGAACAGAAAGTTTCAGACAATGTCCATTGTTGATAATACAAAGCTTCAAGATGGTTCTTATGCAATTCCACATGCTGCACTTGTTGACTCTACCCAATATTCAGACTGCTTTCAATCGCTTCTTGGCACAATCCAAGGTAGTTCTTCCAGCAATTCAAATGCAATTCATGTGGATACTTCTCATAATGCTGTCCATGGAAAGAGTAACTTTTGCCCTTTAGGAGATAGGAATGCTGCTAATTCAAGTGACTTGGCTGAACTTCTGGCATCGCCAATACCATTAGAGTTGACTGGGGGAAACGATTTGTTTGATGTACTGCAACTTCAGCAGAAGCCAAATGGTTCAAATAATAGTGAAGTAAACAATCGTCAATCAATGCCTTATGGTTCAGAGCAAGCTGTTAAGTCTCTGATTGGATGTGTGGATGATGATTTCACTGGATTGATCACAGAAGCTGATCCAGACCAGCTCCTGGATGCAATAGTTTCAAAGATAATCACAGGGCACAAGCAGAACGTAGATACCAGTGCTTCTTGTAGTACTACAGTGGCAGGCTTTGACAGACCACTTCATTCTGATTGCCACCTATATACCACAGGACCATCATCAGGGCCAATATTTTGTAATTTTGCCAGTGTTGCTCCTGTAGCAATTAAAACTGAAGGGCCTGCTGCAGGTTCCAGGCAATCATCTTCTAATATAGATAAATCTGCAGGATGCTCTCAGACACAGGAAAGTTACAAATCACAGATAAGGCTTTGGGTTGAGAATAACCATAGTGTGGGATCAGATAGTCTTTCAACTGGACAGTGTAAAAGGAGTGATGAAATAGGTAAATCAAACCGAAAGAGATCTAGACCAGGGGAGAGTGCAAGACCGAGGCCTAAAGATCGGCAAATGATTCAAGACCGTATAAAGGAGCTTCGTGAAATAGTACCTAACAGTGCAAAGTGTAGCATTGATACATTACTGGAGAAGACCATTAAGCATATGCTTTTCTTGCAAAATGTTGCAAAGCATGCTGATAAGTTGAAGGGATCTGGGGAGCCAAAGATTGTTAGTCATGAAGAAGGTTTGCTCTTGAAAGATAACTTTGAAGGTGGTGCAACCTGGGCCTTTGAAGTTGGTACGCGATCTATGACATGTCCAATCATAGTAGAGGATCTCAATCCACCCCGTCAAATGCTTGTGGAGATGCTTTGTAAAGAGAGAGGAATCTTCTTGGAAATAGCTGATCAAATTAGAGGTTTAGGGTTGACTATCTTGAAAGGTGTGATGGAAGTTCGTAAAGATAAGATTTGGGCTCGCTTTGCTGTTGAGGCAAACAAGGATGTAACTCGGATGGAAATATTTCTTTCTCTTGTCCATCTTCTGGAACCTAGCACTGGGAGCTCTATTTTGTCAGCAGGTGTTGAGAACACTAGCCTGCCGCGCGATAGTTTCTTTCCATCGTCTATTCCAGCCACTGGTTTCTCCAACTGCTTGTGA</cdnaseq>

Protein Sequence

<aaseq>MAGAAPLRDSLRRLCTDVGWSYAVFWRATRAADSQRLKLVWGDGHYERAAGAPSISGFEAMDLLLKEKAAALRSGTGRGGGGGEGHAADGAAGHSHDRVDALVHKAMAQQVHVVGEGVIGQAALTGLHRWIVHDIVDECEEEDEVLLEMKGQFCAGIQTIAVIPVLPRGVIQLGSTKMVMEEAAFIDHVRSLFQQLGSSTAVVPCGSFVQDSIMRTPFHKSLGVPTSSHLEDLAGGGNTYNDDMINHQFRHQKSPASTIQSFNPVQQFYAGPTFCCPVTIASRCDLFQPDHGSTFTLNSQSEDNRSTALLKNSVSHSKTSNDAFSHAFNPLNEPNVSISGRRECVSIEQHGSCRNGEMEITIGRTASSSCTGKTNIINKVDDLLSQDCLVGCQASNATSVNRKFQTMSIVDNTKLQDGSYAIPHAALVDSTQYSDCFQSLLGTIQGSSSSNSNAIHVDTSHNAVHGKSNFCPLGDRNAANSSDLAELLASPIPLELTGGNDLFDVLQLQQKPNGSNNSEVNNRQSMPYGSEQAVKSLIGCVDDDFTGLITEADPDQLLDAIVSKIITGHKQNVDTSASCSTTVAGFDRPLHSDCHLYTTGPSSGPIFCNFASVAPVAIKTEGPAAGSRQSSSNIDKSAGCSQTQESYKSQIRLWVENNHSVGSDSLSTGQCKRSDEIGKSNRKRSRPGESARPRPKDRQMIQDRIKELREIVPNSAKCSIDTLLEKTIKHMLFLQNVAKHADKLKGSGEPKIVSHEEGLLLKDNFEGGATWAFEVGTRSMTCPIIVEDLNPPRQMLVEMLCKERGIFLEIADQIRGLGLTILKGVMEVRKDKIWARFAVEANKDVTRMEIFLSLVHLLEPSTGSSILSAGVENTSLPRDSFFPSSIPATGFSNCL</aaseq>

Gene Sequence

<dnaseqindica>1..110#433..672#776..857#1170..1211#1296..1355#2031..3647#3747..3848#4830..4970#5061..5186#5360..5527#ATGGCGGGCGCCGCCCCGCTGCGCGACTCCCTCCGCCGCCTCTGCACCGACGTCGGCTGGTCCTACGCCGTCTTCTGGAGGGCCACCCGCGCCGCCGACTCCCAGCGGCTGTGAGCGCTCTCACTCTGATCCCCTTCCCCTCCCTGAATTTTCTCCCACACACCTCAGTTCAACTCGACTTGCTAGTTGCTACCACCAGTACTGGTAGTGTACTCCGTAGTTGCTGCCGCCGTGGTGGAATTGGCTGCAGAAGAACTGCGCCCCCCCCCCCCTTTTTTTTTTTTTTGCTTCCTAGGACTGCAATAAATGCCATTGATTGCCACCTTCTTTGCCGCAAACAACTGGACAAGTGGTCCTTCCGATGGCGGGTTCATTGATTTTGGCTGGAGCTGAGTTCGAATTGCACTTTCGTTTTTGGCTTTTGTGTGGCAGGAAATTGGTGTGGGGGGATGGGCACTATGAGCGGGCGGCCGGAGCGCCGTCGATCTCCGGCTTCGAGGCCATGGACCTGCTGCTCAAGGAGAAGGCCGCGGCGTTGCGGAGCGGCACCGGGCGCGGTGGTGGCGGCGGCGAGGGGCACGCGGCTGATGGCGCCGCGGGACACAGCCATGACAGGGTGGACGCGCTCGTGCACAAGGCCATGGCGCAACAGGTCCACGTCGTGGGAGAAGGGTAATTTGGTTTTCGTTACTAGTAGTGTTTTGTTTTGGATTTGTGCTCTGGTTCTATGGGGGTAGTGGTGTGATTTGGTTCTGCTATTGCTGTTGCTGGCCAGGGTGATTGGTCAGGCTGCACTGACAGGGTTGCATCGGTGGATCGTTCACGATATTGTTGATGAGTGTGAGGAAGAAGATGAGGTAATTGCCTTCGATATTGCCCTAGTTGGTGGTGTAGCTCAAATTTAAAATATACATGCCTTAAGTACATTTAGGACTAGGAGTTACAATGTGGATTGATTCATAAATTAGTTGCTCTGAACATATGATGTACTGTTCATCATACCATTCCAAATTAGAGCTGCTGTTTCAGAGGACAAATCCCCTTTAATTTGTTTTCTAGGTCACTCTGCTTGCTTTGCTAACTCTATTTGTTGTATATTTTTTTTGTTTTTCTGTAGCGAATGAGCTTGAATTTCGTTGTTACAACTCTTTAGTTCCATCTTGATGTAGGTATTGCTGGAGATGAAGGGCCAGTTTTGTGCAGGAATACAGGTCTTTATGCTATTTCTTTCATGTTCCATTACCATCAGCTTCCCCATCCCTCGTGTTCATCTAAAGATGCTTGCTTCTTAACAGACAATTGCAGTGATACCTGTCCTTCCACGAGGCGTTATTCAGCTTGGCTCCACAAAAATGGTAAGTTACTTACTCATTATGGCCTCGTGAAGGTGCTGAGATTACCTACTCCCTCCGTCCCAAAAAAACTCAACTTCTACAGTTTGAATTTTGTCCCATAAAAAACCAATTTCTACCATCCTACCTACCCTCAGCACGTAAAACGAGAAATTTTATTCCTTCAATACTCTTTACCTACCTATCACTCTTACTATTTTTTCAATGATTAAAGGTATTTTTGTCATTCTCCATCTCCACTAATTTCACCTCGGGATGCTAGGAATGTATTTTTTGTGGGACGGAGGGAGTATATCCTAGTCCTTTGCAGAACAGTAACCCTTTATTTCTGCTTTGCTCACACTTTCCTGTACTAATGAAAAGAAAAAACTTTACTCTATCACGAGGTTCAAAATATATGGTTTTCTTTATATATATTTGTCTGCCCCCTACCCCCCCTTTTTTTTCATTTCCACTTCTGTTTCCTACTTGTAGTGAACTTGAACCGTTCTGCTGACAATTTTGAACAGTGTGCCTCCACAAATTTTGAAATAAAGATTAGGTTAGGGGTCTTATTCTATATCCTATATAATCCGTCCTGGATCCTGATGAGCTAGCAGAAACAACAAAAAATGTTCCTTCTGTTTTTTGTTTTATTTGTTCAATTCAAAATTCAGTGGTTTCTATTTTGTTTCAAAGGTTATGGAGGAAGCAGCATTTATAGATCATGTCAGATCTTTGTTTCAGCAGCTGGGTAGTTCAACTGCAGTTGTTCCGTGTGGTTCCTTTGTACAAGATTCGATTATGAGAACTCCATTTCACAAATCACTTGGTGTGCCTACCTCTTCGCACTTGGAAGACCTTGCTGGTGGTGGAAATACTTATAATGATGACATGATTAACCACCAGTTCAGGCATCAGAAGTCACCAGCCTCGACAATCCAGTCATTTAACCCTGTACAACAGTTCTATGCTGGGCCTACTTTCTGTTGTCCAGTAACTATTGCATCACGTTGTGATCTCTTCCAACCTGACCATGGATCAACCTTTACTTTGAACAGTCAGTCAGAGGACAATAGATCGACAGCTTTACTCAAAAATAGTGTTTCACATTCTAAAACATCAAATGATGCCTTTTCACACGCTTTTAACCCCCTCAATGAACCCAACGTCTCCATTTCAGGCAGAAGAGAGTGTGTAAGCATAGAACAACATGGTTCTTGCCGTAATGGAGAAATGGAAATAACAATAGGCCGCACTGCTTCTTCAAGTTGTACAGGCAAAACAAATATTATCAATAAAGTGGATGATTTGCTGAGTCAGGATTGTTTGGTAGGTTGTCAGGCAAGCAATGCCACATCTGTGAACAGAAAGTTTCAGACAATGTCCATTGTTGATAATACAAAGCTTCAAGATGGTTCTTATGCAATTCCACATGCTGCACTTGTTGACTCTACCCAATATTCAGACTGCTTTCAATCGCTTCTTGGCACAATCCAAGGTAGTTCTTCCAGCAATTCAAATGCAATTCATGTGGATACTTCTCATAATGCTGTCCATGGAAAGAGTAACTTTTGCCCTTTAGGAGATAGGAATGCTGCTAATTCAAGTGACTTGGCTGAACTTCTGGCATCGCCAATACCATTAGAGTTGACTGGGGGAAACGATTTGTTTGATGTACTGCAACTTCAGCAGAAGCCAAATGGTTCAAATAATAGTGAAGTAAACAATCGTCAATCAATGCCTTATGGTTCAGAGCAAGCTGTTAAGTCTCTGATTGGATGTGTGGATGATGATTTCACTGGATTGATCACAGAAGCTGATCCAGACCAGCTCCTGGATGCAATAGTTTCAAAGATAATCACAGGGCACAAGCAGAACGTAGATACCAGTGCTTCTTGTAGTACTACAGTGGCAGGCTTTGACAGACCACTTCATTCTGATTGCCACCTATATACCACAGGACCATCATCAGGGCCAATATTTTGTAATTTTGCCAGTGTTGCTCCTGTAGCAATTAAAACTGAAGGGCCTGCTGCAGGTTCCAGGCAATCATCTTCTAATATAGATAAATCTGCAGGATGCTCTCAGACACAGGAAAGTTACAAATCACAGATAAGGCTTTGGGTTGAGAATAACCATAGTGTGGGATCAGATAGTCTTTCAACTGGACAGTGTAAAAGGAGTGATGAAATAGGTAAATCAAACCGAAAGAGATCTAGACCAGGGGAGAGTGCAAGACCGAGGCCTAAAGATCGGCAAATGATTCAAGACCGTATAAAGGAGCTTCGTGAAATAGTACCTAACAGTGCAAAGGTAACAGCACCAACACATAGATACCCCTATATTGACCTTTAAAATAAAACACATTATTTATCATATTTTTGGTACTTAGATTTCTGTTTGATTAAACAGTGTAGCATTGATACATTACTGGAGAAGACCATTAAGCATATGCTTTTCTTGCAAAATGTTGCAAAGCATGCTGATAAGTTGAAGGGATCTGGGGAGCCAAAGGTATGTTGCATGATAGTACTTATTTTTAGTTATGTATCAGTATCTTGTATGAACAAGGAACAGCCATTAATGAGAGTGAACATCTAGCACAACAGATAATGTGGTACTTTTCCTTGTTATTTAGTACTCCATCCATTTCTTATTATAAGTTGTTTTGACTTTTTTCTAGTCAAACTTTTATAAGCTTGATCAAATTTATAGAAAAATATAATAATATTTCCAATATAAAATAAACATACTATCAAAATATTTACAATGTTATATTTAATGAAACTACTTAGATATGATAAGTGTTGCTAAATTTTTCTATAAACTTGGTTAAACCTAAAGAAGTTTGACTAGAAAAAAAAACTCAAAACGACTTATAATATGAAACGGAGGGAGTAGTGAATTAGCTGAGCCCAAAACAGACAATCTCTACATTCTTGATATTCTTCGTCATTCCATTTTCGTCATTAGCTTGCTGCTACTGATAATTGATACAGGTAAATGACAGGCATTACATGATCAACATTCAAATTTCCTATGGTCCTTTTGGAGATCTCCTGGAGTTAAGAGTTTCAGAAATCAGCATTGTCTTGTTTCAGCAAGTCTTTTTGGAACCTGCTGTTCATAATGAAATGTGATTGAAGTTGTTTTAAAGCCAAAGTTGTCAATAAATGACTAATTTATCTGCCAATAGCCCAATAGGTCAAAATTTTCGAAATTGACTGTTTTGTATTTTTCGATGGTGACAGACCTTTACTATCATAAATTTGTGAAGAATGCTGTTAACATAATTTTCTTTCTTCAATGGGTACTTTTCAAGTAATCCCATTAGATTTCTAACTTGATTAGCCCCGATAGATAGAAAAGAAAGGTAGATTTCATTGCTATATTTCATTTTGTCAGAGTGTTTTTTATGAATACATTAGTAATCTAACTATTAATTTACTCAAGCTACCCTAATCCGTGTGAAATTTTCTTGTTTCATGGAAGCAGATTGTTAGTCATGAAGAAGGTTTGCTCTTGAAAGATAACTTTGAAGGTGGTGCAACCTGGGCCTTTGAAGTTGGTACGCGATCTATGACATGTCCAATCATAGTAGAGGATCTCAATCCACCCCGTCAAATGCTTGTGGAGGTATTTGCTACTTCTCTGTTTTCTTAGTTCTTGTAAATGCTACTGCACGGTAATTCTGAGTGATGATTCGAACATGTTGTAATTGTTCAGATGCTTTGTAAAGAGAGAGGAATCTTCTTGGAAATAGCTGATCAAATTAGAGGTTTAGGGTTGACTATCTTGAAAGGTGTGATGGAAGTTCGTAAAGATAAGATTTGGGCTCGCTTTGCTGTTGAGGTATTAAATCTTTCCTCGTCTCTCTTCAACTTAGTACCAGTTCTTATGACTATCAATTTTTCTGCCAAAACACCAAGCAAAATCACATTCTAGCGTGATTTGATTATGAAGCTACAAGTGGTGTGGACTGAGTAGTATATCAAAGTTTAATTAAAATATTGAAATTTCTGCAGGCAAACAAGGATGTAACTCGGATGGAAATATTTCTTTCTCTTGTCCATCTTCTGGAACCTAGCACTGGGAGCTCTATTTTGTCAGCAGGTGTTGAGAACACTAGCCTGCCGCGCGATAGTTTCTTTCCATCGTCTATTCCAGCCACTGGTTTCTCCAACTGCTTGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA004859