BGIOSGA004899

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Revision as of 11:13, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA004899| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA004899, complete gene.| tag = OS01G08...")
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Gene Name

BGIOSGA004899

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA004899, complete gene.

LocusTag

OS01G0872600

Ensembl Transcript ID

BGIOSGA004899-TA

Ensembl Protein ID

BGIOSGA004899-PA

Length

5904

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:41432515..41438418

Sequence Coding Region

41432515..41432641,41432745..41432962,41433228..41433261,41433394..41433844,41433910..41434717
,41436482..41436569,41436692..41436795,41436898..41436979,41438165..41438418

Genome Context

<gbrowseImage1> name=IndicaChromosome01:41432515..41438418 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:41432515..41438418 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCAATGGAGGCGGAGGCTCTCCTGCCGGAGCCGGAGTCGCCGCCGCTGCTCGCCGTCGACCACCTCGGCGGCCCGGCCTCCCGCGGCAGCTCCGGCCGGTGGCCCGCCGCGTTCGTCCTCATCGGAGCGGAGGTAGGCGAGAGGTTCGCATACTCGGGCATCATGGGGAACCTGGTGATCTACCTGACCGGGCCGCTCCGGCAGCCGACGGCGGCGGCGGCGGCGGCGGTGAACGTGTGGATGGGCACCTCGATGCTGCTGCCGCTGCTCGGCTCGGCCGTCGCCGACTCATGGCTCGGCCGCTACCGCACCATCGTCTGCGCCTCCCTCCTCTACATCTTGCTCATTTTCACCGGATATGTTCTCATTTTGATTTGGCTGGGCATGATCACTGTCTCGTCGGTTCTTGCACCGGAAGAGTCATCCGAGAGCTCAAATCTAGCTGCTCATGTGGCTTTCTTCTACTTCTCACTCTACGTGGTGGCGTTTGCTCAGGGCGGACACAAGCCTTGCGCGCAGGCGTTGGGTGCAGACCAGTTCGACGAGAACGACCCCGGCGAGCTCGCCTCCAGGAGCTCCTTCTTCAACTGGTGGTTCTTCGCCTCCTACGGCGGCAACACTGTCACTGTTCCCATCTTGAATTATGTCCAGGAAAGCGTAAGCTGGCAGCTTGGCTTCGCAATCCCATGCATCGCCATGGCCGTTTCTCTTGCCATCTTCTTGATCGGGACAAGGAGTTATCGCTTCTACCCTCCGAAGAGTAAGGGAAACCCATTCGGAGAGGTCGCCGAGTGGATTCGACGTTGGATCGCATCTTCCTGTTCGAAATTGCCTGACAGTTCTGATGAGTTGCTACCGTCATCATCGTCTGAGGGGGATGTCAGCAATTCAAGCAGTGAATTCGTCCCTAATGAAGCTGCAGAGCTGGTCAAGTTGTTTCCAATATGGGCTTCCAGCCTGATATATGCTGCTGTGATGGCACAGTGCATCACTTTCTTTACAAAGCAAGCAAGCACACTGGACAGAAGGGTAGGCAGCTTAGTGCTGCCAGCTGCTTCAAACGGGGCATTGTTCAATGCTACAATCATGGTCTTCCTCCCAATCTATGACAGAATCTTTATCCCAGTGGCCAGAAGATACACCAAGAACCCTAGCGGTATCACCACGCTGCAGAGGATCGGCGTCGGGTTGGTTCTCTCGATCATCACGATGATCGTTGCTGCAATGGTTGAGATGAGGAGGCTCAGGATAGCAAGAGATTTCGGCCTTGTGGACAAACCTGAAGCTGTTGTTCCTATGAGCTTCTTGTGGATTGTTCCGCAGAACATTCTGGCTGCAATTTCTGATATGTTTGCTGTGATTGGATTGCAAGAGTTCTTCTACGGTGAGGCACCGGAGAGTCTGCGAAGCTTTTCCATGGCTCTGTTCTTGAGCATAATTGGAGTTGGGAACTTCATCAGTAGTTTCATTGTATATGCCATTGACAGGGTGACCAGTAGCTTTGGAGACAGCTGGTTCTCTAACAATCCAAACAGAGGGCATGTCGATTACTTCTACTTGCTTATTACCGTGCTCAATGCTTTGTCCCTGGCCTGTTTCTTATACTTTGCTAAAATGTATGAACATAGGAAAAAGTGGGATTCTGGTTGTGAACAACATCTACCAATGGCGTACAAGATGAAAGGGGTTTTCAAGGGCCTCAAGGTCATCTCTCAGATCTTCGTGGTGAAGGAACACCAAATGGAGATTGGTTATCCAACCGACGTCAAGCATGTCACGCACATAGGTTGGGATAGCCCGACAGGGAGTGCGGCTTCTCCTAGCTGGATGAATGACATGAAGGGGTCGCCTGACTATTCGTCTTTGAACAATTTTGGACCATCTACAGGAACGTCCTGGACTTCTCAAGTTTGTTCGACAGATTTCGATCACCCTCAAGATATATCACCCTTCGGTTTATATGTCGAAAATGCTGGTAAGGAAGCAAATCCACCACATCCCGACATACCAAAGCCGCCCAGGAAGAGCAGAAGGAAGAAATCCAAGAACAATTCACCGACGGCTTCGTCGAGATCATCAAGATCAAGATCCAAGCGCTCGTTCTCCTCCACTGCTGACACTGTCGTTGACAACAGCATCCAAAATGAAGTCCGGATTGTATAG</cdnaseq>

Protein Sequence

<aaseq>MAMEAEALLPEPESPPLLAVDHLGGPASRGSSGRWPAAFVLIGAEVGERFAYSGIMGNLVIYLTGPLRQPTAAAAAAVNVWMGTSMLLPLLGSAVADSWLGRYRTIVCASLLYILLIFTGYVLILIWLGMITVSSVLAPEESSESSNLAAHVAFFYFSLYVVAFAQGGHKPCAQALGADQFDENDPGELASRSSFFNWWFFASYGGNTVTVPILNYVQESVSWQLGFAIPCIAMAVSLAIFLIGTRSYRFYPPKSKGNPFGEVAEWIRRWIASSCSKLPDSSDELLPSSSSEGDVSNSSSEFVPNEAAELVKLFPIWASSLIYAAVMAQCITFFTKQASTLDRRVGSLVLPAASNGALFNATIMVFLPIYDRIFIPVARRYTKNPSGITTLQRIGVGLVLSIITMIVAAMVEMRRLRIARDFGLVDKPEAVVPMSFLWIVPQNILAAISDMFAVIGLQEFFYGEAPESLRSFSMALFLSIIGVGNFISSFIVYAIDRVTSSFGDSWFSNNPNRGHVDYFYLLITVLNALSLACFLYFAKMYEHRKKWDSGCEQHLPMAYKMKGVFKGLKVISQIFVVKEHQMEIGYPTDVKHVTHIGWDSPTGSAASPSWMNDMKGSPDYSSLNNFGPSTGTSWTSQVCSTDFDHPQDISPFGLYVENAGKEANPPHPDIPKPPRKSRRKKSKNNSPTASSRSSRSRSKRSFSSTADTVVDNSIQNEVRIV</aaseq>

Gene Sequence

<dnaseqindica>1..127#231..448#714..747#880..1330#1396..2203#3968..4055#4178..4281#4384..4465#5651..5904#ATGGCAATGGAGGCGGAGGCTCTCCTGCCGGAGCCGGAGTCGCCGCCGCTGCTCGCCGTCGACCACCTCGGCGGCCCGGCCTCCCGCGGCAGCTCCGGCCGGTGGCCCGCCGCGTTCGTCCTCATCGGTACGTACGTGCGCCGCCGCCTTATCCTGTTTTTTTTTGGAAAAAGAAAAGAAGAGAAAAAAAAAGTAGCATGTAACGAGGCGTGTTGTGTTGTGAGGTGCAGGAGCGGAGGTAGGCGAGAGGTTCGCATACTCGGGCATCATGGGGAACCTGGTGATCTACCTGACCGGGCCGCTCCGGCAGCCGACGGCGGCGGCGGCGGCGGCGGTGAACGTGTGGATGGGCACCTCGATGCTGCTGCCGCTGCTCGGCTCGGCCGTCGCCGACTCATGGCTCGGCCGCTACCGCACCATCGTCTGCGCCTCCCTCCTCTACATCTTGGTACGTGTACCATGACTATCCTCATTTTTTTTCGTTTATATGCTTATACTTATATTATAAACTAAAATTTAAAAGTTTCAACTTTAAATTTAGACTCGATTTTGTGGTTTTTTCATTGTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGAGAATGTATTTGATATCTACACCTATCTCTAGTATTTTTTTCATGAATTTACGAAACTTTTAGGTATGATTTTCACGAGTTTTCAACACTTAGCTCATTTTCACCGGATATGTTCTCATTTTGATTTGTGAGTCGCTGTCGCAAACAAGAGTTCGAAGTACTCAGATTCTACCATGTCGCATTATCTCATCCAGCAGCTTACAAATTACTATCCTGGCTTGGTTTGGAGCCTGATTTTTTTTTCTTACTGTTTTTGCAGGGCTGGGCATGATCACTGTCTCGTCGGTTCTTGCACCGGAAGAGTCATCCGAGAGCTCAAATCTAGCTGCTCATGTGGCTTTCTTCTACTTCTCACTCTACGTGGTGGCGTTTGCTCAGGGCGGACACAAGCCTTGCGCGCAGGCGTTGGGTGCAGACCAGTTCGACGAGAACGACCCCGGCGAGCTCGCCTCCAGGAGCTCCTTCTTCAACTGGTGGTTCTTCGCCTCCTACGGCGGCAACACTGTCACTGTTCCCATCTTGAATTATGTCCAGGAAAGCGTAAGCTGGCAGCTTGGCTTCGCAATCCCATGCATCGCCATGGCCGTTTCTCTTGCCATCTTCTTGATCGGGACAAGGAGTTATCGCTTCTACCCTCCGAAGAGTAAGGGAAACCCATTCGGAGAGGTCGCCGAGTGGATTCGACGTTGGATCGCATCTTCCTGTTCGAAGTAAGGTTACTACTGAAAGTCTGAAACTTCCCATTGAGTCATTTTGGAACTAACATTTGCTGCAGATTGCCTGACAGTTCTGATGAGTTGCTACCGTCATCATCGTCTGAGGGGGATGTCAGCAATTCAAGCAGTGAATTCGTCCCTAATGAAGCTGCAGAGCTGGTCAAGTTGTTTCCAATATGGGCTTCCAGCCTGATATATGCTGCTGTGATGGCACAGTGCATCACTTTCTTTACAAAGCAAGCAAGCACACTGGACAGAAGGGTAGGCAGCTTAGTGCTGCCAGCTGCTTCAAACGGGGCATTGTTCAATGCTACAATCATGGTCTTCCTCCCAATCTATGACAGAATCTTTATCCCAGTGGCCAGAAGATACACCAAGAACCCTAGCGGTATCACCACGCTGCAGAGGATCGGCGTCGGGTTGGTTCTCTCGATCATCACGATGATCGTTGCTGCAATGGTTGAGATGAGGAGGCTCAGGATAGCAAGAGATTTCGGCCTTGTGGACAAACCTGAAGCTGTTGTTCCTATGAGCTTCTTGTGGATTGTTCCGCAGAACATTCTGGCTGCAATTTCTGATATGTTTGCTGTGATTGGATTGCAAGAGTTCTTCTACGGTGAGGCACCGGAGAGTCTGCGAAGCTTTTCCATGGCTCTGTTCTTGAGCATAATTGGAGTTGGGAACTTCATCAGTAGTTTCATTGTATATGCCATTGACAGGGTGACCAGTAGCTTTGGAGACAGCTGGTTCTCTAACAATCCAAACAGAGGGCATGTCGATTACTTCTACTTGCTTATTACCGTGCTCAATGCTTTGTCCCTGGCCTGTTTCTTATACTTTGCTAAAATGTATGAACATAGGAAAAAGGTCATCTCAGTGCAGTGACATTGTGTGCAGCCTACATATTTGTAGCTCCACTGATAAGGTCACCTTCACAATCTGATCCAGTCTCAAGAATGTAACATGGTAAAGCTGTATCTGGTATAATGTATGTTCCAGTTTCACTTCCTTCATTGATACGTCCTAACTATACTTTGTAAGAAATTATGTGACCCAGCTGCAAATGCAAATGAAATGTTCCTTAATTTCATGTTTTGTCTCAGGATCACAGATCGATAAAGTTTTTTTTTCTTTAACCGTTTCTTATTTTTCTCATCTTTATTTGGGTTTGATTTCTTTGCGCTATGCATTTACTTACTCCAGTTCCCTCAAAAGTCCAACTTTTCTACCACGCTGATAAGGAGCTAAAAAATCGACTACCGTAATACCAGTTTCAAAGATGGATAATTTCATATCTAACTCCATAAAGACATAGAGCATATATATATATATATATATATATATATATATATATATATATATATATATATATATAGTTAGTAAAGTAGTTAATGTTAATACCTAAGTAATTGAAAAAGATTCATACTCATTTGAATTGGGTATATACTCAATTTCAACAATGGTGCCCGGGCACCATGGAGCACCAAACAAATTTAATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATGAATAGGGAATGTTGCACTAGTATCTACATGGCCTAAATTGTCAACAGTCTCCCACTATGCAACCTTCTTAATTTGATTCATAACTATATATTTTTGTAGGGACATAACAACTATATTTTGTGGAAGAATTGATAACAGCAAAAGTGAACTATATTTTGTGGAGGAATTAATAGCAGCAAAAGTGTGATTTGTAATTGTTTGAATGATTGATACCTCCCCTTACATCCTTTCTGAATCACATTGATATCCTCAACCTAGCTTTTTGTGTGTTTGCGTATCTCCCAATTTATCCATCTTTGATAGCTAATTCAAGGCTGATCTTTCCAAATATTATTAGCTATGTCTAACTATGCAAATTACCAGCAGCATCTCAAGACGCGGTTCTTGACTGATTCACAAGCCTGTAAGCCTGTCCTTAACGTGACTGCATCTCATGCTTATTATAACTTTGTGTTTAGGGACAACAGCACGTATGCAGCTGAAGACTTAGTGGTCTGGAACTCCAATGTACCTGTATTCTTGTACAGTTAGATTGCTTCTGAATACTTTTCATATATATGATTTTTATTTTTTTTTCATTTGTCTGGCAAAGGCAGGAAAGCCTGCACATATTTGTCTGTTATTATAACCATTTTCTGACAACTCAAAAGTTCTGGAGACCCATTTTGCTCATTGTTATGATTTTGCTGCCAGATTAAATGTATCCATAAAAAAACAAATATTTTCCTTTCCTTGCTTCATTCCAGCTGCCAACCTTCATAAAATCCTAACAAATACAATCTTCTCATGGATGTTCCTGACGCCATACTAGAGAAATAGAATGGGAGGTGATGGACCTGTTGCTTACTCCAAATCCTTCCATTGAGAACATCCAAGGAGGGTATCAACATCATCATCATCACCTCCCATCATAACATCTTGAGGTAAGTAAATTCATCGATAATCATATCGGACAAAACATATCATAATTATCTGGCTGATACATATTCTTTCAGCAATGGAACTGTTGTGAAACCAGAGCTCATTGCTAACCTTTGCTTGTTGTCTTCTGTTTCCAGTGGGATTCTGGTTGTGAACAACATCTACCAATGGCGTACAAGATGAAAGGGGTTTTCAAGGGCCTCAAGGTCATCTCTCAGATCTTCGGTATGTGACCATCAAGTAGATTTTACTTTCTTTTCTACAATGTTACACAAGGCATGAATAGTCAGTTCATTTGATTTGCACAACCTAATTTCTTTCTTGATCTTGCTTAAACCATCTTGCAGTGGTGAAGGAACACCAAATGGAGATTGGTTATCCAACCGACGTCAAGCATGTCACGCACATAGGTTGGGATAGCCCGACAGGGAGTGCGGCTTCTCCTAGCTGGGTACCTGACATAATAGAACAATGTTAATTACAATTATGTTTTGACAACTTAACTACACTGGCCACAATTTTGCAAGCTGAATCATCTGAAAAATACTTGTAGATGAATGACATGAAGGGGTCGCCTGACTATTCGTCTTTGAACAATTTTGGACCATCTACAGGAACGTCCTGGACTTCTCAAGGTGATCTCTTGTTCTTCATTTCTTGACTTCTTTCACCAGGTGCAATTAATGTTTAGTTGGTTGGTACGTCACCTGCATCTGTTCTCTCTAGGCAACAATATTCTTCTCTAGTTTATTTTAGTGGCATGTACTCGTATTTGAGAGGGAATTAAACACGCCATTGATTATCCTAGGAAATAGCCATATAGGAATACTGTAGGAATACACTCATGCTGCCATGTTCAGCAATCTTCTGTTGGTTGAAGAATCATGATCTGATACTAAAGTCTCAGGGGGACAAGGATGCAATTAATAGTAATCTTCTGCTGGTTCAAGAATCATGATGCGATACTACTTTCAGGGAGACAAGATGCAATTAAGCAATTCAACATCTTTCAACAACCAACAGAATTATCTGTTTGTTGGTCGATCTTAGATACAATCATGCAATGATTACTAAAAAAAGCAATGATTACTAAAAAAAATTAGGTGTCACATTTACACAGCCTAAATAGATCTTTTGGAGTTAGGAGTACCAATCATGAACTTTTTTCTTTTTTGTTTCTGTTATCAAGTCAATATTGGTGTCAGAAGTTAATATTTTCGTCCAAGGTGAAAGCTGTAGCAAAGACCTCAAGCTAATTTTATCTACACCAGCAATGCAAAAACTATGTAGTGTTGAAGAATTTTTATTAAAAAAAACACTAATTGACTCCAAACAAAGAAGTTTATTCATATCATGCTAGTACATGGCATATCAAGACGTGCTTTGCACGATAAACGAAAAACTTCTGCAGAACTCTAGTGTGCCGGACATTTGACAGTAACATATTACCTAGTACAAAGTTCTATTCTGCGAGGAAGTCCACCCAGTTCGTACAGGAAAAAGAGATATTGAAAAGCTGATGCGAAATGGGAATAGTTTAACTAACTAGTGGACTTATGAATGCATCAGGGATTAAAATATAACATTAATTTAATCCGCTTAGTAGTCTTCATCAAAATACTGCTGACTTGCAAACCAACATATCAACCCAATCCATTACAGCAATTTGTTTTTTCTTCAATGAACCCAAAGACATACGAGAGGATGATATGTTTGAAATGCATATGTAAACACAAATGTCGTCGAATGCAAGAAAAATTTCTAAAAAGTACCAGATATTAATTATACTACATCATTATATGTTTACTGATTTGCGACAGTTTGTTCGACAGATTTCGATCACCCTCAAGATATATCACCCTTCGGTTTATATGTCGAAAATGCTGGTAAGGAAGCAAATCCACCACATCCCGACATACCAAAGCCGCCCAGGAAGAGCAGAAGGAAGAAATCCAAGAACAATTCACCGACGGCTTCGTCGAGATCATCAAGATCAAGATCCAAGCGCTCGTTCTCCTCCACTGCTGACACTGTCGTTGACAACAGCATCCAAAATGAAGTCCGGATTGTATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA004899