BGIOSGA004928

From RiceWiki
Revision as of 11:13, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA004928| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA004928, complete gene.| tag = B1065E1...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA004928

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA004928, complete gene.

LocusTag

B1065E10.24

Ensembl Transcript ID

BGIOSGA004928-TA

Ensembl Protein ID

BGIOSGA004928-PA

Length

6561

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:41929704..41936264

Sequence Coding Region

41929704..41929887,41930559..41930615,41930701..41930791,41930891..41931051,41931137..41931264
,41931383..41931520,41931809..41931901,41935966..41936071,41936140..41936264

Genome Context

<gbrowseImage1> name=IndicaChromosome01:41929704..41936264 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:41929704..41936264 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGACTGAGGCGTCCACTTCGGCGGCCGCCGGTGCCGGGGGCGGGAGCTGGGTGGAGGGGATGTCGGCCGACAACATCAAGGGGCTGGTGCTAGCGCTCTCCTCCAGCTTCTTCATCGGCGCCAGCTTCATCGTCAAGAAGAAGGGGCTCAAGAAGGCCGGCGCCTCCGGCGTCCGCGCAGGCGTTGGAGGTTACTCCTACTTGTATGAACCATTGTGGTGGGCTGGAATGATTACAATGATTGTTGGAGAAGTAGCTAACTTTGCAGCATATGCCTTTGCTCCTGCTATCTTAGTAACCCCACTTGGTGCACTAAGCATCATCATCAGTGCTGTTCTTGCAGATATTATGTTGAAGGAGAAGCTTCACATATTTGGTATACTTGGTTGTGTCCTCTGTGTTGTGGGTTCAACAACCATTGTGCTTCATGCGCCGCAGGAGCGTGAAATTGATTCTGTAGCTGAAGTGTGGGCTCTTGCTACTGAACCAGCCTTTCTATTTTATGCAGTCACTGTGCTTGCTGCGACTTTTGTGCTCATATTCCGCTTTATCCCCCAATATGGTCAGACACACATTATGGTGTATATTGGTGTTTGTTCTCTTGTAGGGTCTCTCTCGGTCATGAGTGTGAAAGCACTTGGAATAGCCTTGAAACTGACTTTTTCGGGAATGAACCAGCTAATCTATCCACAGACATGGATGTTCACCATTGTTGTTGTTGCATGTATACTAACTCAGATGAACTATCTAAACAAGGCTCTTGACACATTCAATACTGCAGTTGTTTCGCCTATATATTATACAATGTTTACATCACTAACCATTTTGGCTAGTGTGATAATGTTCAAGGACTGGGATCGTCAAAATCCAACTCAAATTGTGACAGAGATGTGTGGTTTTGTTACCATCCTTTCTGGGACGTTTCTTCTTCACAAGACGAAAGATATGGTCGATGGACTCCCACCAACTCTACCTATCCGAATACCGAAACATGATGAAGATGGCTATGCGGCTGAAGGCATCCCCCTCAGGTCTGCTGCTGAAGGCCTCCCTCTTAGGTCACCAAGAGCAGCAGAATGA</cdnaseq>

Protein Sequence

<aaseq>MATEASTSAAAGAGGGSWVEGMSADNIKGLVLALSSSFFIGASFIVKKKGLKKAGASGVRAGVGGYSYLYEPLWWAGMITMIVGEVANFAAYAFAPAILVTPLGALSIIISAVLADIMLKEKLHIFGILGCVLCVVGSTTIVLHAPQEREIDSVAEVWALATEPAFLFYAVTVLAATFVLIFRFIPQYGQTHIMVYIGVCSLVGSLSVMSVKALGIALKLTFSGMNQLIYPQTWMFTIVVVACILTQMNYLNKALDTFNTAVVSPIYYTMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVTILSGTFLLHKTKDMVDGLPPTLPIRIPKHDEDGYAAEGIPLRSAAEGLPLRSPRAAE</aaseq>

Gene Sequence

<dnaseqindica>1..184#856..912#998..1088#1188..1348#1434..1561#1680..1817#2106..2198#6263..6368#6437..6561#ATGGCGACTGAGGCGTCCACTTCGGCGGCCGCCGGTGCCGGGGGCGGGAGCTGGGTGGAGGGGATGTCGGCCGACAACATCAAGGGGCTGGTGCTAGCGCTCTCCTCCAGCTTCTTCATCGGCGCCAGCTTCATCGTCAAGAAGAAGGGGCTCAAGAAGGCCGGCGCCTCCGGCGTCCGCGCAGGTGACCTAATCTCGTCCTAACATCACCATTTTACTCGGTGCCGGACCTGTGTGTAGTTTATGCTCCTTTTTTTGGTTTTCTGATCCGAACCACAATGTTTGGTCTTCTTTTATACTTCTATACATGCGATCTCTCCGGGGAAGTACTGCGGATCTGTATTAGGGTTAGGGAGAGTGGTGAGCCTATGGGTACACCATGATGAGGCATTTTAGGCATAGCGAGAGTGGATTGGATACTAAATTGATTGGCAACGGCATGGAATTAGATGGTGAGGAGTTGGCATATGTTGGCGCAATAATGATGCATTACTATTTCTTACTCTTGAGTTTATGCTTCATGTTCTATAATTGAATTGTAGTTTATAATAATTGTCCGAACATTTGAGCGTGTAAAATTTTTAGATGACCTAGTCCAGCTAAGAATGGGAATGGCCTAAATTTTCCTGATAAGATTGGGAAGAAACCATAACTCTATTGTTTGAACTTTTTAAGGGGTTATTGTTGGCTTGGCTGCAAGATGCATACCTTGTTAGTTTGGATGTACAATATAGTTATAAACATATTTGCCTTGTTAGTTTGGGTGTACAATATAGTTATAACATATGTGCCTTGTTAGTTTGGATGGGCAATAGTTCTTTTTCGCTGACTATGTTTACATTGGTTGGGTTGCAGGCGTTGGAGGTTACTCCTACTTGTATGAACCATTGTGGTGGGCTGGAATGATTACAAGTAAGTCAAAATTTCTAAATATAAGTAAGTATTCATGCTAATACTTATCAGTGTGATATTGACAGTATTCAGTGCTGTTTTCCAGTGATTGTTGGAGAAGTAGCTAACTTTGCAGCATATGCCTTTGCTCCTGCTATCTTAGTAACCCCACTTGGTGCACTAAGCATCATCATCAGGTAACAGCTAGCACCTACACTTCCCTAATCTTGAGATCTCCTGCTGTTTATATTTTCATCAGTCTGTTCATTCTTCATCTTAGCATATTTCTTCTACAGTGCTGTTCTTGCAGATATTATGTTGAAGGAGAAGCTTCACATATTTGGTATACTTGGTTGTGTCCTCTGTGTTGTGGGTTCAACAACCATTGTGCTTCATGCGCCGCAGGAGCGTGAAATTGATTCTGTAGCTGAAGTGTGGGCTCTTGCTACTGAACCAGGTACTGTGTTGCTGACAATTGAATCTCAAAAACATTACTGGCCACATTTTTATCTCGTACTAAGGTTTTAGCTTTTGCCTTGCAGCCTTTCTATTTTATGCAGTCACTGTGCTTGCTGCGACTTTTGTGCTCATATTCCGCTTTATCCCCCAATATGGTCAGACACACATTATGGTGTATATTGGTGTTTGTTCTCTTGTAGGGTCTCTCTCGGTATGTGTTCCATGTGTTAATAACTCTTTTCAATTGATATTCATAAAATACTGTTGAGTGGTTAAGCTGTTCTAGTATCCTATATTCATAAAATTGTGTATATTGCTGCTTTTGGCAGGTCATGAGTGTGAAAGCACTTGGAATAGCCTTGAAACTGACTTTTTCGGGAATGAACCAGCTAATCTATCCACAGACATGGATGTTCACCATTGTTGTTGTTGCATGTATACTAACTCAGATGAACTATCTAAACAAGGTAACCATGATTTCTGGCCTAAAAGTGAACTATCATTATATCATAATATGTTTTCATGTCATCCAAGGTCCAAGGAACATGAACGAAATTGGAACATGAACGAAATTGTACTGGAATATAACATGCCATAATGGACACTAGCTAGCTATTAAAATTAGTATCACAACACCTGATTCTGCCTGTTTAGAACTCAGGCTTGATATACATGCATGACTGTACAATGTCCATCACTTTACAGTTCAATATAGCTTGTTAAATGCCCTAAGCTTACTCTGTTTCCTTTTACAGGCTCTTGACACATTCAATACTGCAGTTGTTTCGCCTATATATTATACAATGTTTACATCACTAACCATTTTGGCTAGTGTGATAATGTTCAAGGTAACATCTTTTGGCTTCTATGACCTTCTGCATTGATGTATGCCAGGCATTTCTTTAGCTTAACTTTTAAAACTGCAAGTTTGGCATAAATGAAGCAAAGCTTGTTTTGACTAGAATTTTACATTGAGGTTGCTTATATATAGCTTTCAGATGCTAATGTAATGTGTTGGCTACTCGGAGTATTGTCAGATTATATTTTTCAGCACAAAAGTATATCCTTCTCTCCATTTTGTCAACAGCAATATGCTTTTTTTTTATTTCCATATTTGTACATAGGAATTATGATAAATAAGGGAGATAACTGAGTCTCATCAGAACAAATCAGAAACTAGGAATTGAGCTTTAACACCTTCATGTTTCTCATTTATTTTCCCTTCTTTCTCCAATAGTTTGAGCGTGTGACGTACAATTGATTCTTGAACCGCTCTTTACAGTATCACCTATTGTCCTGAACCTCATCGCCGTTCTATTTGTTCAACTTTTTTGTGAGATTTCTATCATTAGCATTGTCGGGACAAATACCATGCTGTAAGATTTTGCTGAAGCATACACTGCTGAAATTTATTACCATTCTGGCCATCTGCTTCTGTGGCCACCCCATAATACAAGGGCACATGTTTCTGTAGAAACTAAGTGGCATTTCTTGCTAGATGAGTACAGAAATACCGATCCTATTCACTCTATACCACATTTTCCTAGTTAATATGGAGTATGTACTTGTGTGCTTAGTACTCTGCTAAGGCTGTAAAAAAAAACTCGAGGGCACTTAACAGTCTTTGCTTAAGGCTTGTGAGCTACTCGAGCTCAGCTTGTTCTGGGCTTGGCTCAAGCCTAAAACGAACTGAGATCAAGCCTAAGGCTCGTGCTCCGCATTGAGCCAAGCTCTAATGCATGCATAAGGATTATGCTCTTCTCATAGCCTGTCAATCTGTCACGCCCAGAAATTCCCGAATAGAATTCCAAGCAGAATGTGCATTAAAATCCCCGTCCAGGACCAGCCGGGGTACACAAACGACAATGTTGACATACAGATCCACGTCTTACAAACATCATAAAGCCTTACAGAAATGCAGCGGAAAAACAAAAGAAACTGGAGCTAAGCCTTGACTAAACTGCAGCGGGAACACCACTCCACAGGCATCCTCGACGGCACGGACGAAGCCTACTCCTCGGAGAAACCTTCATCTGACCCGTACTCAAACTCTGGGGTTGGGAAAAGTAGAGCAAGACTGAGTACTACCCACTGTACTCAGCAAGTCATACCGGAATAGAGGTATGATGCAGAGGATCATCAAAGAAAAGCTAAAGTGGTTCATTTGCATAAAGCGAGCATTTATAAACAGAGATTGAAATATTTAAACAGTTGTAGTAAGTAATTAAGCAGTATTAATCATCCACTGTCCAACGCTACACCGCGTTGCAACAGGCCCAACCATCCACCTAAACTATCCAAATTAAAGGATTACACTAAGGTGAGACTAATCACGGTGAATCTGGTTGACCGCCCCTAACCGCGGGCACGGCTATTCGAATAGTTTTACTCTGATCAGAGGTGTACAACTGTACCCACAAGACACAGCCCCACGACACGTTTCCGTGCGCCGACATGCCACCACGACATACCGGAAAGAGGCCGTGACAGGACCCTTCGCATAACCCCCTCTAGCCAAGCACACCACACCTCAGGTTTCACCCCCGTCCCCAGCGGGCGACGGGCAGTCCCCTCTCGTGCCTAGGTGAATCCGGAAGCGACAGAGGCCGTCGCAGGGCCCGCCCCGCTCCATCACGCCCACCCTTGCCTGGATGCGTCGACTAGAGGTAAGCTACACTACAAGCCCAGCCGTTGCTCACGCTGGCTTGTGGTAAGTACGATAAATTCTTCCAGGGCATCCCGCGAACCGGTCCTTAACTGCCATGGGTGCGACCAGCAAAACCATGCACCCACAGCCCACCATGTGGTTCATTTTAATTAACCAACACCAGAGCGGTGGTACTAATCCAACATTATCATTAGAACCGACAGTCTGAACACTTAGTCGTGATTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGCGGCGGCGCGCCGGGATCGGCGGGAGGTGGGGGAAGGACCCGACAGGTGGGCCCCACCTGTCGGCGACCCCGAGAGAGGAGGCGGGCGGCCGGCTGTCGGGCTGGGCCCTCGGCCTGCGGCCGGCCCAGCAAGGAGGAGGGGAGGAAGGAGGGGAAATGGGCCGACGGCCCACTTAACAAAAGAAAAGGAAAAAGGGAGGGAAAAGAAAAAGAAAAGGAAAAGGGATTTTCCCTGGAATTAAAAATTGCACTTTGGTGATTTTTAATTGGTTACAATTATTTCTCGAGCTCTGAAAATTCCACTAAAAATCCTGTTAATGAATTTCGACATGTAGAACTCAAGAAAAATTCCACATGTCCAATCCGATTATTATTTGCATTATTTTCTTTAGGGTTTTCTCCTGATTTCTCCAGCATTTTCTTAGGATCATTTATAAATTACAATTTTGGCTTAGGAGGAGAACTACAGGGTGTGACACAATCTCTCATGCTTTACCTGCTCTACATTGAAGTTTTCAATTCCTCAATGTCAAGCCCAAGGCTAGTGCAGTAATGCTAGCTATCTGCAATGCATCCTAGTTGCATGCCAGTATGCCACACATCATCTTATTCATACCGGTGGCAGCCGCCTGTCTACTCTCCTTGCTCCTTCTCTCTATTTCTCCTTCTGTGAGCTGCTAGTGTGACCAGTGCAGCAGGGTACTCCCCTGCTGGTCTGCTGGATAATACATCTCCAGGCATCATCACCACCGCGGTCCTGGTGAGATTCCGAGCTTTGTGTAGCCGAGCTCAAGCAGGCTTGAGCTTCATCCGAGTCGAAACTTAGACTAATTACAAGCTTGAAGGTTAGTCTAGGCTCAGATTGCGCTCAGCTCTAGTTTATGTGGAGCTTGAGCCTGGGACCTAAGCTTGCTCGAGCTCAGCTTGCTGACAGCTGTACTCAGTGCCAGTAATGCATGTTTGGTTTATGCCCAACTTTGTGATGATGGGTTGAGACAGCTATGGCTTAGAGTCTGGAAGCCACAACTGTGGCAGTGGACTAAACTCCTTATAATATGTGGTGTGACTAAGATTGCATGGAAAGTTAGGCATCAAAGTTAACACTTACAATCCTTCTCTTCTATCAAGATTAGTCCAACTCATATCATCCCCAAATATTTTGTTTTTGAGGGCAGTCACTGACTTACTGGCCATTACCTGATAAATTTGATTATTATTTGAAGCTGTAGACATTGAACCAACTGTATGATCCATGACAAAGCTATTGTTTTGAAGTTCCCTAGGCAATCCTGCTATCAATGCTTGACCTGTTCAACTTGATTAAGGAGTGTTTAGATCCAGGGGTGTAAAGTTTTGGTGTGTCACGCTAGGTATTATATAGGGTGTCGCATGGGGTTTTCGGACACTAATAAAAAAACTAATTACAGAATCCGTCAGTAAACCGCAAGATGAATTTATTAAGCCTAATTAATCCGTCATTAGCAAATGTTTACTGTAGCACCACATTGTCAAATCATGGAGCAATTAGGTTTAAAAGATTTGTCTCGCAAATTAGTCGCAATCTGTGCAATTAATTTTTTTTAGCCTATATTTAATACTTCATGCAGGTGTTCAAACGTTCGATGTGATAGGGTGAAAAATTTTGGGGTGGGATCTAAACAGGGCCTTAACTTTGTTGCTAGTCAGTTGATTTGGCTGTTGGCTGAATTGTTACGCTACATGGACATAGAATCTTTATATAATTTTGAGCCTTGTGGTTGTGGTCAATATTATGCCTTGCAGTCTGTCCCATCTAACTTAAATATAAACTAAAATATAAAATACTTCTTGCAGTCTGCAAAACTTAAATATAAACTATCACTGCTGTCCACTGTCCTATCAGTTATACATGTAGCGGTGGAAACCTGCTGTGCTTAGTGAACAAGCTCAAGTTGTGTTGTGGATAACTAATATACTTGCATGCAGGACTGGGATCGTCAAAATCCAACTCAAATTGTGACAGAGATGTGTGGTTTTGTTACCATCCTTTCTGGGACGTTTCTTCTTCACAAGACGAAAGATATGGTCGATGGTATGATTTCATGCTCTTTCTTTAATTTGCAAAAAATATGTTTGTGAATTCTCACTCTGGCCTCGTAGGACTCCCACCAACTCTACCTATCCGAATACCGAAACATGATGAAGATGGCTATGCGGCTGAAGGCATCCCCCTCAGGTCTGCTGCTGAAGGCCTCCCTCTTAGGTCACCAAGAGCAGCAGAATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA004928

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA004928&oldid=42652"