BGIOSGA004931

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Revision as of 11:13, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA004931| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA004931, complete gene.| tag = B1065E1...")
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Gene Name

BGIOSGA004931

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA004931, complete gene.

LocusTag

B1065E10.32

Ensembl Transcript ID

BGIOSGA004931-TA

Ensembl Protein ID

BGIOSGA004931-PA

Length

6170

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:41957449..41963618

Sequence Coding Region

41957449..41957754,41958332..41958418,41958489..41958581,41959391..41959467,41959875..41960463
,41960605..41960695,41960785..41960897,41961339..41961425,41961744..41961866
,41961960..41962094,41962339..41962386,41962895..41962996,41963223..41963618

Genome Context

<gbrowseImage1> name=IndicaChromosome01:41957449..41963618 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:41957449..41963618 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAAGACCCCGTGGCTGCCCCTTCCTCCTCCGTCGCGGCGGCGTCGGCGGCGGCCGCGCCTAGGGTTGCGCCGGTGGCGGCCCCGCTCCCTCTCGCCGCGCAGCAGGCGCCAGCCGCCGCGGCGGGGTGCCGGAGGCAGGTCTTCTCCGTGGAGCTCCGGCCCGGGGAGACCACCATCGTGTCGTGGAAGAAGCTGCTCAAGGAGGCGGGCCACGCGGCCGCCTCGCCGCCGCCCGCCGCGCCGGCGGTGGCGGTGGCGGCGTCCGACCCGGCGTTCCCTGCGCTCCCCGGTCAGCCTGGTGCGGTGCATCCTCCAGAAAGTGATCCAAAGGATCCAGCACAACCAAATCGGTTCAATGCTGTTATTGAGAAAATTGAGCGCCTTTACATGGGCAAACATAGTAGCGATGAAGAAGATCTTGATGATGTACCGGATGATGATCAATATGACACTGAAGATTCTTTTATTGACGATGCTGAATTGGATGAGTATTTTGAAGTCGATAATTTGAGGACTAAGCACGATGGGTATTTTGTTAACAAAGGGAAGCTGGAACAGATTGAAGCTGGTACATCAGCAAATGTTGCACCAAAGAAAAGGAGAAGAAAAGATTCATCAAGTGGTTATATTGAAAACAATCAGGTTGCTCCAGCTGATTATCCGAGCATTGGCAATATGCCTGGAAAATCCGCTGCAAGAAGTGGTGCACATGTTGGGAAGAAATTAACCAGTAGCAACATAGGTTCTTATGGCGAGTATTACCATGATGACAACAGAGTGGTGAAGAATAAAACTGGTGCTGGAGTCCACAAAAGGAAATCCATGGATTTTGCCATGGGTTCTGATACTGCAGCATACATGAAGATATCTAGTAAGGATATGCCGTATGCTTCTTCGGAGCTCAATAAAGCTGCAGGACTCCAGCCTACTGATTACACTCATAGGTCAAAAACTGCTGAGGCATATGACTATGCCTATTCAGCATACAGGGATAGGGATACTTCAATGCAACTTGATTTCCAACAAAAAAGAGCCTATACTGGGGAAAATCGAGATCCATCAAACAAAATTCATCGAAAAGAAAAACATGGAATGGGTGAATTTTCCGGCATGGCAACGACTGGTGCACTGTATTCTGGACAAGTAATGCCAATCACTTCTAGAGACGGTTCTGGTACCAAACCTAAAGGCACTAGACTTGAGAGAGCTATTCGGGATCTGCAAAAGATTGCTGCTGAATACAGACCACCAGCTATCGATATTAACGAGGTAGATCCAAATGGCCAGGTAGCAGTTAAAAGACGGTTGCCTCCAGAAGTAAAACAAAAACTAGCCAAAGTTGCAAGGCTATCGGCAAACCATGGAAAGATTCAAGAACATGAGTTAATGGATCGCCTCATGGGCATAGTTGGGCATCTTGTGCAGCGAAGGACACTCAGGAGAAACATGAAAGAAATGGTAGAATCAGGTCTGTCCGCTAAACAAGAGAAGGCTGATAAATTCCAACGTGTAAAAATGGAGATCAATGAAATGATCAAATCGCGTGTGGCTGCCAAGGCCAAGGTCAATGAACACCACAGTGGATCAGCTGATGATTTTCAGATTGCGAATGATGAAAAAAGATATTTAAAAGGAAAGTCTGTAATGGATGCTGCTTTGGAGGACAGGATCTGTGATCTGTATGATCTGTACGTTGAGGGTATGGACGAAGATAAGGGCCCTCAAAGCAGGAAGTTATATGTGGAGCTGGCGGAGTTGTGGCCTGAAGGTTCCATGGATAATGTCGGAATCAAAGATGCAATTAATAGATCGAAGGAGCGAAGGAGATCATTATACAACCAGCAGAAGGTTCGCAACGAGGAGAGAATGAAGAGAAAAAGGTTGGCTGCGGCAGCTAAACTGCAAGATGGCTACCCTGTTGTAATGCAAAGCGCACTGATCCAGCAAGTGGCACAACCACCCATAACAAACCCTGTCGCCACATACCCTGTGACTGACCAGGGATCAAAAAGTTTTGACAGAGTTCGTGAAATAAGTGCGAGTGCAAATCCTGACGACATCAACCGGAACACTGGCGAGATGAAGAAGAAAAAAAGAAAACCAGAATCTGACCTTGTAGATACACAAGCTAACGCCATGAAGGGCCCCTCTCAGCATGTAGAGAAGAACAAGCCTCCTAAGCGTGCTGATGAGGCAGTTGAAACCGTGCTTTGTCTCCCGTTCTATGACCAACAACCGAGCTGA</cdnaseq>

Protein Sequence

<aaseq>MEDPVAAPSSSVAAASAAAAPRVAPVAAPLPLAAQQAPAAAAGCRRQVFSVELRPGETTIVSWKKLLKEAGHAAASPPPAAPAVAVAASDPAFPALPGQPGAVHPPESDPKDPAQPNRFNAVIEKIERLYMGKHSSDEEDLDDVPDDDQYDTEDSFIDDAELDEYFEVDNLRTKHDGYFVNKGKLEQIEAGTSANVAPKKRRRKDSSSGYIENNQVAPADYPSIGNMPGKSAARSGAHVGKKLTSSNIGSYGEYYHDDNRVVKNKTGAGVHKRKSMDFAMGSDTAAYMKISSKDMPYASSELNKAAGLQPTDYTHRSKTAEAYDYAYSAYRDRDTSMQLDFQQKRAYTGENRDPSNKIHRKEKHGMGEFSGMATTGALYSGQVMPITSRDGSGTKPKGTRLERAIRDLQKIAAEYRPPAIDINEVDPNGQVAVKRRLPPEVKQKLAKVARLSANHGKIQEHELMDRLMGIVGHLVQRRTLRRNMKEMVESGLSAKQEKADKFQRVKMEINEMIKSRVAAKAKVNEHHSGSADDFQIANDEKRYLKGKSVMDAALEDRICDLYDLYVEGMDEDKGPQSRKLYVELAELWPEGSMDNVGIKDAINRSKERRRSLYNQQKVRNEERMKRKRLAAAAKLQDGYPVVMQSALIQQVAQPPITNPVATYPVTDQGSKSFDRVREISASANPDDINRNTGEMKKKKRKPESDLVDTQANAMKGPSQHVEKNKPPKRADEAVETVLCLPFYDQQPS</aaseq>

Gene Sequence

<dnaseqindica>1..306#884..970#1041..1133#1943..2019#2427..3015#3157..3247#3337..3449#3891..3977#4296..4418#4512..4646#4891..4938#5447..5548#5775..6170#ATGGAAGACCCCGTGGCTGCCCCTTCCTCCTCCGTCGCGGCGGCGTCGGCGGCGGCCGCGCCTAGGGTTGCGCCGGTGGCGGCCCCGCTCCCTCTCGCCGCGCAGCAGGCGCCAGCCGCCGCGGCGGGGTGCCGGAGGCAGGTCTTCTCCGTGGAGCTCCGGCCCGGGGAGACCACCATCGTGTCGTGGAAGAAGCTGCTCAAGGAGGCGGGCCACGCGGCCGCCTCGCCGCCGCCCGCCGCGCCGGCGGTGGCGGTGGCGGCGTCCGACCCGGCGTTCCCTGCGCTCCCCGGTCAGCCTGGTGCGGTAAGCGCTACCATTACTGCTGCTACTGTCGGTTGGTCAACTGTTGTGTGCCAATAATGCCTGTGCTGATTTAGGTGCTCTTCGTGAGCTGATGTAAATAGATAGATGCGAAGCCTAAATACTAGATCCAGAAGTGGAAAAGTGGAGCTTCTGTGCCTCTTCAGGGCATTAGCTTTGTTAGGTTAGGATAAATGCAGAAAAGCTATTTTTATGTCTCATGAGTAGTGGGTGACTTTATTTTTGGCTGGCTGATTACTGGCGTTCTCGTTTCGGATTTTGAAATGGTTTTATTGTCTCTTCCTGGTACCTTGGGATAACTCTCTGCTCGAAATTATTGCCTAGCTCTTACCGTGCCTAAACCTCTTTCAGGATGGCTGCTGTAGAAAAAAATTATGCCATACTCGGTGACATTTTCTGTTGACATTGTAATTTACTATGTTGTTTATGCCATAAAACCTTTACCATTCAATTTTACATGTTTTAGTCAGACCTTGTAGTCTTGTACGTTTGCATAGCAATGAATATAGGTTCTGTATTTGGCACCGAGTTCATCATATCATTTGAAATTTTGAATCAGGTGCATCCTCCAGAAAGTGATCCAAAGGATCCAGCACAACCAAATCGGTTCAATGCTGTTATTGAGAAAATTGAGCGCCTTTACATGGTAAGGACTGCTGTTATTTGACTATGTATTCACCATTCGCTGAGTTCTGATTCTGTATTAAAATTGCCAGGGCAAACATAGTAGCGATGAAGAAGATCTTGATGATGTACCGGATGATGATCAATATGACACTGAAGATTCTTTTATTGACGATGCTGAATTGGTTAGTATTTCTAAGCATATCCAAATTTCATGTCAATATGCCAGTAATAACTCGGGGGCAATTTTATGCTTTAGTTTCTTCTCCCTCTTTTCTGATTGTCTATCAGTGCACTTCTTTTCTTTTTGTTAATGTAATGATGCAGACCACATCAGATAATACCAGTAAGACAACTCATGATTTACCATCAACACCCACCACATTTTTACTTCTTGTAATACCTTCATGAACTCTCAGTTTATTGTTTTATGGCCCCATTGTTTGGCTTATTGGAATAAGCCAAACAGCATATTTGCAAACGAAAAGTAATTTGTGAATAAAACTTCAATATACGTGTTCTTAGCGATCTAGGAGCAAAGGCTGAAAAATAAACTTCGGCCAAAAAAAAAAAAAACCAAAATCACCTGTAAGTTTAAGGTTGAAAATTCAAATTTTGGCCAATGAGCATAAGCATAAGCGAAAAGATGAGGCCTTTATATAGTTCATATGTCATGTACGATTCGTTGGCATATGGACAGTTGGTTCTTTATCTACACATAGTGTTACCTATATGTCTCGGAAATGGTGGCACTCAAATGTTCACAGCATATTGGGTGACCCCTCACCCCTGTATCATGTACTAATATGACTTGGGTTATGTAGAAGTCAGTGCCAGCTTATATGTATGATAGCATGTGCAAAACTTCCTATCCTTATGGGGTGACACCTTCAAACATATTTTCTGCATTGTCAAATCTGTATTTGTACATATGTTGAGAGTGTGTTGTCATTGTCTCATTGGTGATTGCTTTCATGTTTTTTTATCTTTGCAGGATGAGTATTTTGAAGTCGATAATTTGAGGACTAAGCACGATGGGTATTTTGTTAACAAAGGGAAGCTGGAACAGATGTAAGATTCCTAAAAATCTCTTTAGTTTGGTTGGGGTCAATAGAGGCACAATATTTCTACCCAATCCTCCTGTGCTGATCATCATTGAGGACACCCTGTCACACTCACACCATTCCATTGGATGTTTGATTTTTTTTATTGAGTATGATAATCTTGTTTGATGGGATTTGCAGTGCATTTCTTATTACAAGAAACTTTCATCCTTCAGAGTTTAATACATATTAACAGAAACACATGCATTAATATGTGGCAGCATAGATGTTTTTTTTTTCCAAATTAATCGAAGGAGTGGAAAAAATAATAGTAGCACTCCACACATGCTTTACTTGTGTGCAACTGTTCATGCATTGCATATTAATGTATATGCTAGAGTGGATGATATATGCCAATTTGTCTGTGTTTTGCAGTGAAGCTGGTACATCAGCAAATGTTGCACCAAAGAAAAGGAGAAGAAAAGATTCATCAAGTGGTTATATTGAAAACAATCAGGTTGCTCCAGCTGATTATCCGAGCATTGGCAATATGCCTGGAAAATCCGCTGCAAGAAGTGGTGCACATGTTGGGAAGAAATTAACCAGTAGCAACATAGGTTCTTATGGCGAGTATTACCATGATGACAACAGAGTGGTGAAGAATAAAACTGGTGCTGGAGTCCACAAAAGGAAATCCATGGATTTTGCCATGGGTTCTGATACTGCAGCATACATGAAGATATCTAGTAAGGATATGCCGTATGCTTCTTCGGAGCTCAATAAAGCTGCAGGACTCCAGCCTACTGATTACACTCATAGGTCAAAAACTGCTGAGGCATATGACTATGCCTATTCAGCATACAGGGATAGGGATACTTCAATGCAACTTGATTTCCAACAAAAAAGAGCCTATACTGGGGAAAATCGAGATCCATCAAACAAAATTCATCGAAAAGAAAAACATGGAATGGGTGAATTTTCCGGCATGGCAACGACTGGTGCACTGTATTCTGGACAAGTAATGGTAAGAGCTATTCTGTTCGTCGCATGACTTGTGCACAAAATGAACATAAATCCTCATGCAGTCTATATATAGCTGTATATTTGACCTGTATGACCTTATAAACATGCATGCTTACTCAATTTTACTCGTATTTCCCAGCAGCCAATCACTTCTAGAGACGGTTCTGGTACCAAACCTAAAGGCACTAGACTTGAGAGAGCTATTCGGGATCTGCAAAAGATTGCTGCTGAATGTGAGTATCACATGGCTTTTCCTTGCTTTATAGCATGGATCACGGAGTAGTTCTGAAAGTAACTTCAGGTACTTGGAATACTTTTGCAGACAGACCACCAGCTATCGATATTAACGAGGTAGATCCAAATGGCCAGGTAGCAGTTAAAAGACGGTTGCCTCCAGAAGTAAAACAAAAACTAGCCAAAGTTGCAAGGCTATCGGTATGTGGTAGCATAACCAAATCTACCTGTGATTCCATTTTATCAAATGTGTGAATTCCATGTGTTTTTATATGTGACTGTTAACAGAATTTTTTCAGCCTTGTATACTTGCTACGGAAATTTATGGTTTATGTACCCAGTATATATGCATCTCTTTTACGCACAATAGTTTTTCTCTAAGAGCGGCATTGGAAGCTACTGGTGTCGCTTAAACTTGTGAATTATGTAAAATACCTAGCCTTTTCTTATTCTCAACTGTAGTTAGTGAGATATTAGTTCATTTGCACTAAGTGCTAGCACTGCACGGTTTGTGAATTGATATCAAGCTACACCAGAACCCGTTTTCCCTTTTGACATTTATGTGCTCAATTTCATGAACCCTGTACTGCCTACCTGCCAGCTTTTAATAGTTCATACTTCTAATACATTTGATCTGTGCAGGCAAACCATGGAAAGATTCAAGAACATGAGTTAATGGATCGCCTCATGGGCATAGTTGGGCATCTTGTGCAGCGAAGGACACTCAGGGTAAATAATGGGAGTAATTAAACATTTCCTTAGTACCTGAAATTTTGCTAGTATAGGATAGTGGTTGCTTATTCTTTTGATTTGACCTTTTGCTTTTTGCATTTTTCAGATTTGATAAAAAAAATAAAACTGCTCTGTTAAAAAGAAATGTTTTTTTAAAAATATTTTAGGTATGAACATGATCTCCAATACATAACATTTCATACCACTTCTCGTAGTAACTTGTTGGCAATCGCTCAAACTACATGTCCATGAGATTGCACTCTCTGTTTGGTTGGTCCGTCTGATCTGTGTTTTTTTTTTGTTTTGTTTTAAAAGAGAAACATGAAAGAAATGGTAGAATCAGGTCTGTCCGCTAAACAAGAGAAGGCTGATAAATTCCAACGTGTAAAAATGGAGATCAATGAAATGATCAAATCGCGTGTGGCTGCCAAGGCCAAGGTAAATGGAAGCAGGATGTTTCGATGGTAATTGGAGTCGCATCCTTCTTTAACACTTCTGATTATAGATGTCATGTTTTATACATGCCACCAGGTCAATGAACACCACAGTGGATCAGCTGATGATTTTCAGATTGCGAATGATGAAAAAAGATATTTAAAAGGAAAGTCTGTAATGGATGCTGCTTTGGAGGACAGGATCTGTGATCTGTATGATCTGTACGTTGAGGTATAAGCATGTAGATATATTATGTTTTTCAAGGTTCTATTGGTCTTATCATTTTGATGTTGGTGGAAAGAAATATACAAGTATATGTGGTTTTTACTCTTCATAACTTTTAGTAGCTAAACAAGTAGCAGATTTGCTTTAGAACAAAGCTGATTTCAGTGACATACCAGCTTTGCCCCTCTTTTTAACTTGTTTGGTTTCGTCTGTAAATGTACATCTATCTGCATACTTGTTACTTTGTCAGGGTATGGACGAAGATAAGGGCCCTCAAAGCAGGAAGTTATATGTGGAGGTAATTGCCCTGACTATTTATATTTGTTAACAGCTAGAAGGACCATTATGATGTCTGTTGAAAGAACTCGTGATACTTTTACCAGATCTTTTCTCTCTTTACGAGATTCCTTTCCTTCCGCATTGTGATTCAGAACTTGTGTAACTGTTGATGTTTTGACCCTTGTCATTACTTATTGACCTCTATGCTTTTCCATGTCAGAATTATTTTTTGCTTAGTTGAGCCCAATTGCCTGGTCTCCCCTTAATATTACACGTATATTTAAAAATCAAATTTGACAAATTAATTGCCGTGCTGCTTCCACTTGTTATCCAGTTTTTCTTCCTTTAATTGTTTGTAGATGTAATTTTAAGCTGGGTGTTTATTTGCTTGCATTTCTATACACTATAAGTAGTTAAGCGGATTGTTCTTTTGGTTGAGATATCATTTCTAGCTGTACTATTTATCTTAGGGCCCTTTATCTTATGGTGCTCTGCATGTCTTTATATGCCTATATTGGTTGTGCCAGCTGGCGGAGTTGTGGCCTGAAGGTTCCATGGATAATGTCGGAATCAAAGATGCAATTAATAGATCGAAGGAGCGAAGGAGATCATTATACAACCAGCAGAAGGTCATCAGTCCTTTCCCTTTTTCTTAAAAAAATGCATGCCTGTCTATAGATTGAAGTTATCTTGTGATAGTATGAAACATTATGTCAATTGTCACATGGCAATTGAATAGTTCATGCAACTCTTGCTGCAAAGTCATTTTTTGGACGAATAACCCCTTAAATGTTTTTTTATAAAAAATACATGCACATGATGTAACTCATTATTTTCTATTCTTAATTAATCCAGGTTCGCAACGAGGAGAGAATGAAGAGAAAAAGGTTGGCTGCGGCAGCTAAACTGCAAGATGGCTACCCTGTTGTAATGCAAAGCGCACTGATCCAGCAAGTGGCACAACCACCCATAACAAACCCTGTCGCCACATACCCTGTGACTGACCAGGGATCAAAAAGTTTTGACAGAGTTCGTGAAATAAGTGCGAGTGCAAATCCTGACGACATCAACCGGAACACTGGCGAGATGAAGAAGAAAAAAAGAAAACCAGAATCTGACCTTGTAGATACACAAGCTAACGCCATGAAGGGCCCCTCTCAGCATGTAGAGAAGAACAAGCCTCCTAAGCGTGCTGATGAGGCAGTTGAAACCGTGCTTTGTCTCCCGTTCTATGACCAACAACCGAGCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA004931

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA004931&oldid=42655"