BGIOSGA004936

From RiceWiki
Revision as of 11:13, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA004936| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA004936, complete gene.| tag = P0408G0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA004936

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA004936, complete gene.

LocusTag

P0408G07.6

Ensembl Transcript ID

BGIOSGA004936-TA

Ensembl Protein ID

BGIOSGA004936-PA

Length

2124

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:42064604..42066727

Sequence Coding Region

42064604..42064715,42065501..42065634,42066635..42066727

Genome Context

<gbrowseImage1> name=IndicaChromosome01:42064604..42066727 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:42064604..42066727 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGACATTCTCCGATGCGCCGCCCGGGGACGCGGCGGCCGGCGAGAAGATCTTCAGGACCAAGTGCGCGTACTGCCATGCCGTCGACAAGGCCGCCGGCCACAAGCATGGGCCAAACTTGAACGGTTTGTTTGGGAGGCAATCTGGTACAGCTCCTGGTTTCTCTTACCCATCTGGCGACAAGATAGTGCCTGTGATTTGGGAAGAGAACACTTTGTATGACTACCTGCTTACTCCTAAGAAGTACACTCCTGCCAAGATGGGGTTCAATGGACTGAAGCAGCCACAGGACCGTGCTGATCTCATCGCATACCTGAAGAACGTTTGTAACTTGTAA</cdnaseq>

Protein Sequence

<aaseq>MATFSDAPPGDAAAGEKIFRTKCAYCHAVDKAAGHKHGPNLNGLFGRQSGTAPGFSYPSGDKIVPVIWEENTLYDYLLTPKKYTPAKMGFNGLKQPQDRADLIAYLKNVCNL</aaseq>

Gene Sequence

<dnaseqindica>1..112#898..1031#2032..2124#ATGGCGACATTCTCCGATGCGCCGCCCGGGGACGCGGCGGCCGGCGAGAAGATCTTCAGGACCAAGTGCGCGTACTGCCATGCCGTCGACAAGGCCGCCGGCCACAAGCATGGTGAGCCACCGAACCACCTAATGCATATAGCTCAGTGTTCGTCCGGTTGGAGGATTGTTAGATTGTGGAGGTTTCTGCATCGTTTTACTGCTCTGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTCCTGTTTGATTCAGCTTAGGATTATTATAATCTGGATTATTATGAGTAAGCCAAAACAAACAAGTACTTCCTCCGTTTCACAATGTAAGTCATTCTAGCATTTCTCATATTCATATTGATGTTAATGAATCTAGATAGATATATATGTCTAGATTCATTAACATCAATATGAATGTGGGAAATGCTAGAATAACTTACATTGTGAAACGGAGGGAGTAGATTATTATGATAGATTATTATAATCTATAAGCTAGATTAGTATAATCTAATAATCTCCTATGGAGGAGCTTTTTCTAGATTATTGAGTGGCTAAAGACCCACTATCCTTAGATGCCTCCAATAATCCAGAGAAACAAACAACTCGCAACTTATTCTATATCAGCTTATTATAATCCAGCTTAGAGTAATCTGATTTAATAATCTGGATTACAATAATCTTAAGCTAAAACAAACAGGGCCTTAACCATTTCCATCTGGTACTGTTCTGTGCAGTAGCTGTGTATTTCATCCAATGACACTTTTCAGAGTTCAATTCATTTGATCTGTTCATTTCATCTGTGTAGTATTCTCCCTCTTTTTCTTCTTTACCAACCAGATGCTGATATGTAATTACTAATGTCAATGCTGTCCTTTGCAGGGCCAAACTTGAACGGTTTGTTTGGGAGGCAATCTGGTACAGCTCCTGGTTTCTCTTACCCATCTGGCGACAAGATAGTGCCTGTGATTTGGGAAGAGAACACTTTGTATGACTACCTGCTTACTCCTAAGAAGGTGCGACCAATGTTAACTTTCCATCACTTCTGTTTTCTAATCAGTAGTGTAACTTCAAATGTGTGCGTCGGCGATGTGCATTTTGTGACCAGATATTTCATTTGCAATGTTGTCCCGTGCCAATGTTGCCAGTCGAAGTGATCATTGTTAAGTCCAGGGACTGGAGGACTTTGCAAGCTTTGTTGTCACTTGAACTGATAGTGTTTTGTGAACTTTGTTAGTGTTGCTGATTATTCTTCAGCATGCCCTCGAGCTGCCACGCTGTGGACCTAAATTAAAGATAGTCGCCTCCCTGGAACTCATAAGTGGTAGCTTCTGATGTTTATATTGATTGCCCGTGTTTTTTCTTGTGTACATGTTTCTATTTGTGATCACATTCTAAATCAGTTGCTTTTGGATCCATCATTTTGTGACAATGAAAATCTACGAATATCCTCATAATTATACTTATAGGTTTTAAATTTGAGGACAATTAATTATTTATTGCATCTTATATTTTAAATTTGGGATCCTTTGCAATGCGCGGATCATCATGCTAGTATAGATTAACTACAATTAGCTCATTGTGCTATTTTGTTTCTATTACGTGTCTTTGCAGATACTCTTGGTTCTGTGATCCCAGGCATAACTCATAAAGTAGCAGGATTCGCATGAAGGGTCATTGCATCACAAGAGCTGATGCGAGTCGATCTCAAAGAAAAACTAGAGTTAAACTTTTATTCATGGTTATCTCATATTCAGAAAAAGCGCTGTCTACTACTTCAGAGCACCTTGTCTAGTTGTCTTGCTAGCGGTGACTGTTATGTGCTATTGCTAAGTACCTCTAGTGCATCCAATGAAATGATTTTGCCCACTACCACTACCACCACATACACACGCGGTATATCTTAAACGCTTGCACATCAGATGCTGAATATTTCAGACATATTTGTCAGCTATTACAGGGCAATTCATTTATTCAATATGATCTCAGGACATTACTCTTTGTTTGCATATGCAGTACACTCCTGCCAAGATGGGGTTCAATGGACTGAAGCAGCCACAGGACCGTGCTGATCTCATCGCATACCTGAAGAACGTTTGTAACTTGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA004936