Os11g0539600

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Revision as of 09:12, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0539600| Description = Cyclin-like F-box domain containing protein| Version = NM_001074567.1 GI:115485782 GeneID:4350664| Length = 2114 bp|...")
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Gene Name

Os11g0539600

Description

Cyclin-like F-box domain containing protein

Version

NM_001074567.1 GI:115485782 GeneID:4350664

Length

2114 bp

Definition

Oryza sativa Japonica Group Os11g0539600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:21529015..21531128

Sequence Coding Region

21529015..21529329,21529473..21529556,21529743..21530615,21531030..21531128

Expression

GEO Profiles:Os11g0539600

Genome Context

<gbrowseImage1> name=NC_008404:21529015..21531128 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:21529015..21531128 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtttatggtaaagtatcaaacagtaaaggatgtgtcagatctggtctcaataagagggcaagatatggtagttttcggcttcaccgcctacctcctgatattatctgcgacatattttcacgattacatttcaaagaagctgcaaggacgagcatggtgtctaggagctggagaaggctttggagatgctacccaaatcttgtcttcaccagacaaacaatgctccatggcagcataacagctgacgaccgcctggctgctaccttcatctctcgtgtaaacagcatcttgtggcagttcaggtcatcctctctggagaatttcatagtgaaattccctctccttgggagagatgatgcacatcacattgacggatgggttagcttctctgctgcttcaagagctgggcagattgttcttgatctctgtccagaagatcaagaggacactgacatgatgaatggcatgtacagtttccccctgcatatcttcttctctggtgacaactgcgtcaggtctctctccctagggttcgtctccctgacaatacctcctgatctcaatctcagtggcttcacaaacctgaagaagcttggattgcacatggtgtccatcaggggagatctgcagtgcctgctctcccactgcaatgttttggagtggttaagcctgacacagtgttcattgcaacatcggagcatctgccagaagttgtgccggttgcggtatctgtgcgtgcgcaagtgtaggctgcagaagctgcatctgcaagcaccgaatctgacagaattcgagctcaccaactatccgataccgattgtgcttgccgaatgcctgaacttgtcggtggcgacgatcgagctggtgtcattctcggattgtttgagctatgtctccactgagcttccagctggtggtcttcatcgcgtgcaggatcgtctctccatcaacatgacagtcagaactgagggaagttcggacaatatcagcggaatccttcgcctggcttcgctactggagatggcaccatgtctggaagagctggaactcaatatgtactgtcctagtgcaccgatctacacaaagcgtggtcagttagataaattaagttcagtgtgtgtgcacaagcatctcaggactgtacgcatgacaggattcgatagtacacgtggacagcttgaactggcgttccaaattcttaggagtgcacccaatcttgaccgtctgatcgttgatccgatggtcagggttgcatggagcctgcgccttgattggtcggagcaagctgatctgatgctcgttcgaaggatgatggccgagaaccgccttctcagaagcgagtaccgtcacatgattacccttctatga</cdnaseq>

Protein Sequence

<aaseq>MVYGKVSNSKGCVRSGLNKRARYGSFRLHRLPPDIICDIFSRLH FKEAARTSMVSRSWRRLWRCYPNLVFTRQTMLHGSITADDRLAATFISRVNSILWQFR SSSLENFIVKFPLLGRDDAHHIDGWVSFSAASRAGQIVLDLCPEDQEDTDMMNGMYSF PLHIFFSGDNCVRSLSLGFVSLTIPPDLNLSGFTNLKKLGLHMVSIRGDLQCLLSHCN VLEWLSLTQCSLQHRSICQKLCRLRYLCVRKCRLQKLHLQAPNLTEFELTNYPIPIVL AECLNLSVATIELVSFSDCLSYVSTELPAGGLHRVQDRLSINMTVRTEGSSDNISGIL RLASLLEMAPCLEELELNMYCPSAPIYTKRGQLDKLSSVCVHKHLRTVRMTGFDSTRG QLELAFQILRSAPNLDRLIVDPMVRVAWSLRLDWSEQADLMLVRRMMAENRLLRSEYR HMITLL</aaseq>

Gene Sequence

<dnaseqindica>1800..2114#1573..1656#514..1386#1..99#atggtttatggtaaagtatcaaacagtaaaggatgtgtcagatctggtctcaataagagggcaagatatggtagttttcggcttcaccgcctacctcctgtaagtaaaaccatgattttccatgtacttcttacttaactagcaaaatacctgcattgcaacggatttgacaaagcatatagcagtaaattctaaacataatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatttctcatggaaaaaatataacttgcaagcaaacttcaatcatggagccaagctacatgcacaaaatatctatgtatctgcccttaaaagatcccagtagtaccccatcagttctagagatggtggtgagaggctctttgttatagtagagattgttacatgggaatgcagaaaataacttggtaaagggactccaaagaaaaggttaatttgctgagctatttcccttgttctgatctgctgcttctgcaggatattatctgcgacatattttcacgattacatttcaaagaagctgcaaggacgagcatggtgtctaggagctggagaaggctttggagatgctacccaaatcttgtcttcaccagacaaacaatgctccatggcagcataacagctgacgaccgcctggctgctaccttcatctctcgtgtaaacagcatcttgtggcagttcaggtcatcctctctggagaatttcatagtgaaattccctctccttgggagagatgatgcacatcacattgacggatgggttagcttctctgctgcttcaagagctgggcagattgttcttgatctctgtccagaagatcaagaggacactgacatgatgaatggcatgtacagtttccccctgcatatcttcttctctggtgacaactgcgtcaggtctctctccctagggttcgtctccctgacaatacctcctgatctcaatctcagtggcttcacaaacctgaagaagcttggattgcacatggtgtccatcaggggagatctgcagtgcctgctctcccactgcaatgttttggagtggttaagcctgacacagtgttcattgcaacatcggagcatctgccagaagttgtgccggttgcggtatctgtgcgtgcgcaagtgtaggctgcagaagctgcatctgcaagcaccgaatctgacagaattcgagctcaccaactatccgataccgattgtgcttgccgaatgcctgaacttgtcggtggcgacgatcgagctggtgtcattctcggattgtttgagctatgtctccactgagcttccagctggtggtcttcatcgcgtgcaggatcgtctctccatcaacatgacagtcagaactgaggtgagtactgttcaagagctcagcaaaatcaagtatatttcgctctaatataatgttcatggtatatgcaacttcacatctcgcctttctgaccatgactgtatcgccatttagtcgcgaggatttgcagaaagcaatggcaggttcaacaatctgaagcatctgatcttgaacatcgatgtccagggaagttcggacaatatcagcggaatccttcgcctggcttcgctactggagatggcaccatgtctggaagagctggaactcaatgtaagaccaattgctaaaacatcacaattaagcttctgaacattccaaattgaaccatatttctgtaaataaaaaggttatccaatctccaagattttcactaacttgcagtgaattatttatttgttcttccatatatgcagatgtactgtcctagtgcaccgatctacacaaagcgtggtcagttagataaattaagttcagtgtgtgtgcacaagcatctcaggactgtacgcatgacaggattcgatagtacacgtggacagcttgaactggcgttccaaattcttaggagtgcacccaatcttgaccgtctgatcgttgatccgatggtcagggttgcatggagcctgcgccttgattggtcggagcaagctgatctgatgctcgttcgaaggatgatggccgagaaccgccttctcagaagcgagtaccgtcacatgattacccttctatga</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0539600, RefSeq:Os11g0539600