BGIOSGA004966

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Revision as of 11:14, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA004966| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA004966, complete gene.| tag = OS01G08...")
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Gene Name

BGIOSGA004966

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA004966, complete gene.

LocusTag

OS01G0892200

Ensembl Transcript ID

BGIOSGA004966-TA

Ensembl Protein ID

BGIOSGA004966-PA

Length

6528

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:42473729..42480256

Sequence Coding Region

42473729..42473836,42473897..42474124,42476460..42476579,42479196..42479217,42479466..42480256

Genome Context

<gbrowseImage1> name=IndicaChromosome01:42473729..42480256 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:42473729..42480256 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCCGGCAAGACGACCAAGTTCCTCGGGCCGTTACTGCCGTCGTTCCTCAAGATCGACATCTTGCCCGAGGCTCTCCGCGGAAACATCGATCCAACAAGTTGTCAGGAATATCTGAACAATCTCTGGAGAAAAACAGAACAAGCAGTCCCGCCTGAGTCCTTCGTCGGCAACCTACAGCTTAGCGGCAAGCCTCTGAGCCGCCCATGCGAGCCGTTCTTCCTGTCTCCTGATGGCGCGCCGACGGATGGACGAGGCAGCGGAGGCGGTTCCGTGCCAGTGGCCGAGAAGAAGAAGAAAAAGAAGCTGTCCGGCGCGGTGGTCGCGACCATTGCCGTTGATCAACGTCTCCAGAAAATCGCGAGTTCTCCGGCCCCATCCCCGCAGGCCTCAGCCGCTTTTCAACGTGATGTAGTCGATGACGATGACGAGGAGCTTCTCGTCCTTCTTGTAGAGGCCGGTGACATCGGATCAGTCGCTCACCGTGGTGTTTTTGTTCTGAACTTGATGTCCAATGCCTGGAGACACTATCGATCAGTGATAGATTCCAACGGCATACTCCAATCCTCATGGACTTTTGTTGACAACGGTACTGACGGGTACATATGCAAATTTACTGGTGTGGAGTGCTGGCATCCTGACGAGAACAGGGTACTTTCTTTGCGTCTCGGTAACCTAGGACTTCAGGGCCCATTTCCTCAAGGTCTGCAGAGCTGTACAAGCATGATTGGCCTGGATCTGTCTAGTAACATTTTTTCAGGACCAATCCCTGCTGACATCGCCACGCAGGTTCCCTATCTAACATCTTTGGATCTCTCATACAACAGTTTTTCAGGTCCAATACCAGCCAGCATCTCAAATATGACATACCTGAGCACACTCAACCTTCAGCACAACCAATTCAGCGGTGAAATTCCAAGGCAATTCGATTCAATTGGCCGGTTGATTTCGTTTAATGTTGCTGAGAATTTACTATCAGGGCCTATTCCATCCTCATTACAGAAATTTTCGGCTTCAAATTTTGCTGAAAACCAAGGCTTGTGTGGTGCTCCGTTGGATAACTGTCCCAGGAGGAGGAGATGGAGACTCAGGCTGCACAGAATCAACGACGAGTCCAGCATCGGAGCGGCTGTTGGTTTCGTCGTTGGGTTCGTGGTGGCCTTCTACTTCCCTCACTGGTTTGTCTTCTCCAAGAGGCTTCATCCCTACATCTTTCAAATATGGTCCATTCCTTCTGGAAATCTATCTGCCAACCTGCGAAGAACATGA</cdnaseq>

Protein Sequence

<aaseq>MSGKTTKFLGPLLPSFLKIDILPEALRGNIDPTSCQEYLNNLWRKTEQAVPPESFVGNLQLSGKPLSRPCEPFFLSPDGAPTDGRGSGGGSVPVAEKKKKKKLSGAVVATIAVDQRLQKIASSPAPSPQASAAFQRDVVDDDDEELLVLLVEAGDIGSVAHRGVFVLNLMSNAWRHYRSVIDSNGILQSSWTFVDNGTDGYICKFTGVECWHPDENRVLSLRLGNLGLQGPFPQGLQSCTSMIGLDLSSNIFSGPIPADIATQVPYLTSLDLSYNSFSGPIPASISNMTYLSTLNLQHNQFSGEIPRQFDSIGRLISFNVAENLLSGPIPSSLQKFSASNFAENQGLCGAPLDNCPRRRRWRLRLHRINDESSIGAAVGFVVGFVVAFYFPHWFVFSKRLHPYIFQIWSIPSGNLSANLRRT</aaseq>

Gene Sequence

<dnaseqindica>1..108#169..396#2732..2851#5468..5489#5738..6528#ATGTCCGGCAAGACGACCAAGTTCCTCGGGCCGTTACTGCCGTCGTTCCTCAAGATCGACATCTTGCCCGAGGCTCTCCGCGGAAACATCGATCCAACAAGTTGTCAGGTAGTATCCATGTGGTTTTCTCATCACAGTTATGCGCATGTGTGCTCTAGATTTCTTCAGGAATATCTGAACAATCTCTGGAGAAAAACAGAACAAGCAGTCCCGCCTGAGTCCTTCGTCGGCAACCTACAGCTTAGCGGCAAGCCTCTGAGCCGCCCATGCGAGCCGTTCTTCCTGTCTCCTGATGGCGCGCCGACGGATGGACGAGGCAGCGGAGGCGGTTCCGTGCCAGTGGCCGAGAAGAAGAAGAAAAAGAAGCTGTCCGGCGCGGTGGTCGCGACCATTGCCGTAGGCGGCGGGATGGCGGCTCTACTGGCTCTGGTGCTACTCTTGGTCCGAGGCGCCGCTCCACCCGCCGCCTGCCAGCTCTCGGCTCTGTCGCCACCCCTCTGCGCCGCCCGCCGCCGCTCGCCATTCTCGGGGAGAGGGGGGACACAGAGAAAAGGATAGAGAGAGATGGGATAGAGAGAAGGGGTAGTGAGGATGACAGGTGGGGTCCACGTGGGCCCCACCATTTTTTATTATTGTGTGTGTGAAACTGACATATGGGTCCCATAGGTTTTATTATTTTTCAAATCGAATTGCTACGTAAGCGCCACGTCACAGATGAAGACCGAGTCAAATTTGCCACGTAGGCGCCACCTCAGCCAAAACCGGGGTCAAATACTGCCAAGGGACCTTATATAAACGGTTTCGTATGTTGGGGGACCTGTCGTACCCGGTTTTGCGTTCAAGGAACGAAAATCAGACTGGGCGACAAATAGAGGGACCCAAAGTGAACTTATTCCAACTTTTCGGGACGTCTTTGAGATGGTCCGATCATAGGTACATGTTTGCGCGTGGCCCATGGTGCGCTAGCTTCACCAAATCGACATGCGCGAAAAAGAAAAGGGATGTAATTTTACTCGACAACGTTTCCATTTGACTCTTTCTTAGTCCTGAATCCAGGGATTCTTATCATTCAGCACTAGGGTGCAGGCCCGCGAATATACTTATAGTACAAATAAATAGAAAATATCAACGACGACCCGTCTCAGTCTCTCTGGGCGGATGTCTGAAGATAATTGATTCGCTTTCTTAAATACTAGTTGATACTATACAGTTTGGATATAATTCGTCTGATTCAACCCTGTGATCATCAGTGAAATGAGCCATATTATATATGCCAAAATGAAACAAAATAAATAAACAATAACGAATGCTGATCAAAGAAAGGCATACGATACGAATGGCTTNTGTTTGTTTACATTCATGGACACGGACAGGTGGATGCTTTCTCTGAGTTCGTCCCACAAATCTAACCATTTTTGGTGACTGCATGCCAACACATGCAACTTGTAAATACCTCACAAATCAGAGATATAATTACCGGCTTTCGTCTCTGTCGCGCAAGTGGCCATACACTCGTTCAAGCTCCATATAGCCAGCTATGCCAAATTCCGTTGCAATAATTTGCAAGTTGTATATGTAAATCAATACTATTTTGGCAACGCCGGATCGGAGCATCTCGTTTTTGGCAGGATATTATGTAATTAATGGTGCACTTCTAGCAACCAAATTTTGTCTGAAAATGATAGATAATATATTTGTAGCTCGTGTCAAACCTTGCTTAATTTGTTTGCCTGGCCAATTGCCATTGTTCTGTTTTGGAGTAGGTCATATTTTTCTAATAGAGAACTTACAGTTAAAAAATGTAATTAACTGGAAGTATAAATACCTAGAATTTCATTTTGCAGTTGATATTAGTGTTTCAGTTCAAAACTCAAATTAGTTTGTTTTGCATTTGGTTGGAACTGAAAGTTGATTAAATTCCCAGCTAACAGTTCCGCAGCTGAAAGCACTCACGCTGAATAGTACGCTACCCTGAACAATTGGCCTGGCCTAATAAATACTACCTCCGTCACAAAATAAGTGCAGTCGTGAATATCCGTGCCCAACGTTTGACCGTCCGTCTTATTTAAAAAATTTGTAAAAAATTTGAAAATATTTAGTCACACATAAAGTACTATTCATGTTTTATCATCTAATAGCAAAAAAAATACTAATCATAAAAAAATTTTAAATAAGACGAATGGTCAAACGTTAAACGTGAATAGTGTAAAACTGCACTTATTTTGGGACGGAGGGAGTAAATCTCTCACCCCGAGCCCACAAAGCTTCTAACTGGCACGGCTTGGTCCACGACGTCTTTTCGGTCCGGAGTCCTCTCTGGCCCAAACCGTATATAAGAGAAGTCCAGCCCACCACAAGCCAGTTTTCCCCGGAAATACGTTCACTTGAGGTCCCTTATTTCGTCGCCGAGTTTGAAATTTGTACCTGAATCACAATGCCACGTCATTGAACTTACAAAACCGGATCACATTTGATCACAAGGCAATATTGCTCCCGGTTACGGCTGATGTGGCGGTTGAGTTTGTGTGGGACCCACATGTCAGGGTATTTTGGTCTTTAAAAATTAATTAAAAATAGTAGACCCACATGTTAGTGACACAAACTCTTCCACCTTCTTCCTCTGTTTCGACGTTCTCTTTCTCGGCTGCATGGGTGATGGGTATCGTCCTCGCCGCGCGGATGTGCGTGAGCAGCGACTCCCTGAGCTGGGCTTCTCCCATCTGAAGCTCAGGTTGATCAACGTCTCCAGAAAATCGCGAGTTCTCCGGCCCCATCCCCGCAGGCCTCAGCCGCTTTTCAACGTGATGTAGTCGATGACGATGACGAGGAGCTTCTCGTCCTTCTTGTAGAGGTAGGCGACGACGGGGAGGAGGTTGGGGTGGGTGAGAGGCGGCGCATGTGCTCCGAGAAGTCCTTCTCGTCCTGCTGCGCTTCGCCGCCCGCGCTGCCACCGGACCCGGCGGCGATGGCTTCGAGTTGAATTGGGCGTCTCGCCGGACGCCTGTCGTGGCTGGCCTCTTCCATTCTTTCCGGCTGGGCAACATGACTGATAGGAATGTTCGCTATTGCTTCGGCGTCCATCGTCTCGTACATATGTACTCTGACCACCTCCATATTCCTGCGGTCGACGACTCCCTTTGCGATCATGCTAACAATATAATGATGAGCATGACGTAAATGGTCATGAACGTCGCCAGGTTGGACGGCGAGGCGCGCGAAACGCGAACGTATCGCAGAAGGCGTCGGGAGGCTTGCCGCACAGGTCCTCGTTACCTGCATGTGCTCGATGAATCCAAGATCAAGATAGGCGGCCGGCGCGCGAGGATTGGAGGAGTAGGACGCCGCGATCAATTTGCGTACTTGAGAACATGCTGGCGTTTAAGCGGTTGTTGTTGTAGACGTCGACGAACCTGAGATCCGGTTGGGAGAAGTCCGGCAAAGGGAGTCGCTGCTCATGCACGTCCGGGCGGCCAAGGACGAGGCCCACGCGTGTAGGCAAGAGAATGTCGAAACAGAGGGAGAAGAAGAGTTTGTGTCACTGACACGGGGGGTCCACCAGTTTTTATTTATTTTTGAAGATTGAAATTCCTTGATATGTGGGTTTCATGTTAGACTCAGTCGTCACGTCAACTAAAACCGGAAGTAATACTGTGTTGGGACCAAATGTGATTAGTTTTATAAGTTGAGGGACAAATTATATCTGGTATTGCGGTTGAGGGACGAATTTCAAACTCTACGACAAATTAAGGGACCTCAAGTGAGCTTATTCCTTTTCCCTGCACTGTGCAGCCCAAAACACTCCCCACGGGATCCACGTCGTCGAAACGCGCAACGCCCCCCACTCCCCTGGGCCGCGCGAGCAGCCCATGCGAGATGCGGAACGGCGCGGCGTTCTTCCGCCCAGGAATTTTTTTTACATTTTTTATTAAAATATTTGTAAAAATAATTTTTTTCAAAATTTATAAATCTAGTCACCTCGCGCCCTCTGGAAGGGTGTTTTTTAAAAATCGCCTTTCCAAAGGGCGTTAAGGGGCCTAAATGCAATTTTTTTTATTTGTGTTCAAACCCTTTCCACCAGTTTTAATTGCTTCAAAACTAATAATGCTTATTTGACACTTTAAATAATTTTAAATGAAAAAGTAATAAACTACGTAGTTACTTTGATATAAAGTTTATCTCCATCCGATTTCGTTTGAAAATGTAGATGTGATATTTTTTTTAAATAGGATTTATATTTTGTACCGAATTTTTGATATCTAAAATATCTTAAATGAAAAGGTTGTTTAGATAGCCTCTAGCTCTACAATTTTGATATAAAGTTTTATTTCATCTGACTTTATAAGTCTGGAAGGAAATCAGCAAGGGGGATTGCTAAGATGACATCTCCAGGGAGAGAAGCGACGAAACACCTCCGCTGTCGTCCGTCGAGGTCTCAGAGAGAACCGAGACTGAGCTTTCACCCGACACCCCACTAGAGGAGATGGAACGGTACAACAACACCCTCAAGAGGGAAAACGACGCTCGAAGATGCCATCGTTGTCGGCCTGGCTAAGAGGCCCAAGACAGGGCTAGGTTTCCACCAACCGCTTGCCTATCCACAACTGACCACCATTGCTCCACCACCATCAAGTGTCAGGCGCCCCCGCCAACCAGCCTCCGCACTTCAAGTCACTTGTTTTACATTCGGCTAATTAGCTGTTTGACCGTTTCCACCCGCCCAAGATCCAAAATGTATCAGGAGCAAGGTTGTCAGGATCGGGATACTAGTTAGTATCGTTTTGCTCAAAGTAATATCGTATCGTAGGATCGTATCGTAGTATCGGGATACTATGAGATTTTCTTTTTTTAAGTTTAATTAATATTTATATTAATTATATGTAGCCATTCTATATAAAAAATATAGTAATGATATATATCATGCAAATAGAGGCATTTATTAAGAGAAACCATGTTGGTTTTGATATATTTAACTGATTATTATATAAATTTGAGCATATTTATTTACATTATTTTCATACCATATTATTTTAAATAATATTTTGTAGTATCGTAGGGATCGTAGAATCGGGATACCACCTAAGATTTCGTAGGATCGTGTACTAATGAATAGTAGGATCAAGATACTATAAAAATTAAGATACTATGTGGGATCGGTTTTGGCTTGGTAGTATCGTAGTATCGTAAGATACTAGGATACGTATCGGGATACTGACAACCTTGATCAGGAGATCCGGAGAGTTGACGCAGCGTCAACCGGGTCCGTCGTTCTGCCGCGTTCGCTTTCATGGTTTCCTGTACTACTAATACTACGAGGTTGGCTCTACTTTCCCCTGAACCATACCGCGTTGAGCTTCTGAGTTCATGAGCTGCAACTTTTCCTTTCCACCCGCTGAAATCTGAATCCTCAAATGGTAGCAACAAAGTAATCTCATACAGTCATACTGAAGCTTTGCTGTGGCTACGTCAGGCCGGTGACATCGGATCAGTCGGTGAGTTTCGTAGAACACCTTGCTTGTTTATGCCTTTAGGTTGAAGGCAGCTCTGTGGCATCTCTACACCTGAAATCGAGTACATAGTTTATTCATGTTACAAGTCTTTCTTTTTTATGCAACTTTTGAGCAGGTCACACGGGAATTTAGAAGCTGCAACCTTTCGTCAGACGAACTGTCTGTTTCTAGCCCACCTCTGCAATGGCTGATGGTGCCAAGCTTCTCCTGTGGTTGCTGCTCTTGAGCAGCTCACCGTGGTGTTTTTGTTCTGAACTTGATGTCCAATGCCTGGAGACACTATCGATCAGTGATAGATTCCAACGGCATACTCCAATCCTCATGGACTTTTGTTGACAACGGTACTGACGGGTACATATGCAAATTTACTGGTGTGGAGTGCTGGCATCCTGACGAGAACAGGGTACTTTCTTTGCGTCTCGGTAACCTAGGACTTCAGGGCCCATTTCCTCAAGGTCTGCAGAGCTGTACAAGCATGATTGGCCTGGATCTGTCTAGTAACATTTTTTCAGGACCAATCCCTGCTGACATCGCCACGCAGGTTCCCTATCTAACATCTTTGGATCTCTCATACAACAGTTTTTCAGGTCCAATACCAGCCAGCATCTCAAATATGACATACCTGAGCACACTCAACCTTCAGCACAACCAATTCAGCGGTGAAATTCCAAGGCAATTCGATTCAATTGGCCGGTTGATTTCGTTTAATGTTGCTGAGAATTTACTATCAGGGCCTATTCCATCCTCATTACAGAAATTTTCGGCTTCAAATTTTGCTGAAAACCAAGGCTTGTGTGGTGCTCCGTTGGATAACTGTCCCAGGAGGAGGAGATGGAGACTCAGGCTGCACAGAATCAACGACGAGTCCAGCATCGGAGCGGCTGTTGGTTTCGTCGTTGGGTTCGTGGTGGCCTTCTACTTCCCTCACTGGTTTGTCTTCTCCAAGAGGCTTCATCCCTACATCTTTCAAATATGGTCCATTCCTTCTGGAAATCTATCTGCCAACCTGCGAAGAACATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA004966