Os11g0539700

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Revision as of 09:12, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0539700| Description = Cyclin-like F-box domain containing protein| Version = NM_001189653.1 GI:297728436 GeneID:9270886| Length = 2079 bp|...")
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Gene Name

Os11g0539700

Description

Cyclin-like F-box domain containing protein

Version

NM_001189653.1 GI:297728436 GeneID:9270886

Length

2079 bp

Definition

Oryza sativa Japonica Group Os11g0539700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:21534761..21536839

Sequence Coding Region

21534761..21534865,21535334..21536245,21536576..21536839

Expression

GEO Profiles:Os11g0539700

Genome Context

<gbrowseImage1> name=NC_008404:21534761..21536839 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:21534761..21536839 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagagccgtggttcatggtaaggggacaaagagtgaaggctgtgccaggatcaatatgaagaagaggatatcccaggcttttcgacttcaccggctacctcctgatgttttgcgtgtcatactatcacaattgtcattcaaagaagctgcacgtacaagcgttgtgtccaggaagtggaaacggctttggagatgctacccaaagctggtcttgaccggagatatgatgcttggcagcagcagcaatgctgcaggagaccacccaacatcgaataaaacaacatttatcaggcgtgccaacagtatcgtgcggcagctatcatcaccatcagctacgctcaacaagttcatagtgaaatttcccctcctccaaagcgacgcagatcacatcgacagatgggtcagcttgtcagcatcatcaagagcaaggcgaattgttcttgatctgtgcccagaactcgagaagttcggtgacaaagaccaaatgtacagcttccctcttcatcttttcagtgttggtggtagtaattcttgcgtcaagtctctctgcctaggctttgtctccctgaatctgcttcatcagctgtctcctgctggtaataccaatcgcttgacaatcctgaagaagcttaccctgcacaaggtgtccattgctggtgatcttcagagcttgctcctggagtgcgatgttctcgagtggttaagcctcaccttctgctccctgcaacaccgtgatctggtcatccaacaccagcagccactgcagcgtctgcggcatctgcgtgtgctgcactgcaggctgcagaagctggagctgcaggctccgaatctgactgagtttgagtttgctaaccaccaggtgcctttggtgcttggtgattgcgtcaacatgtcgatggcgtcggttgggctgttgctgccgtcggatggcttcgactacgcctgcaccaagcttccgtttgctcttcctcatgtttgtgaccgtctcactctaagcatggcgatcagaactgagatgtactgtgcgaatacgccattctacacctccgatctggatgcggcggcgacaacgccggcggctcgtctccacgagcggctcaggaccgtctacatgaccgggttctacggcatccgtggccagctagagctggcgcaccggatactccggagcacggtcgctctcgaccgtctgatcatcgatccgacgcgcaaggttgaccacgatttcagaaaccaggcctacgcaggcatgggaaggaccatggctacactgtattaa</cdnaseq>

Protein Sequence

<aaseq>MRAVVHGKGTKSEGCARINMKKRISQAFRLHRLPPDVLRVILSQ LSFKEAARTSVVSRKWKRLWRCYPKLVLTGDMMLGSSSNAAGDHPTSNKTTFIRRANS IVRQLSSPSATLNKFIVKFPLLQSDADHIDRWVSLSASSRARRIVLDLCPELEKFGDK DQMYSFPLHLFSVGGSNSCVKSLCLGFVSLNLLHQLSPAGNTNRLTILKKLTLHKVSI AGDLQSLLLECDVLEWLSLTFCSLQHRDLVIQHQQPLQRLRHLRVLHCRLQKLELQAP NLTEFEFANHQVPLVLGDCVNMSMASVGLLLPSDGFDYACTKLPFALPHVCDRLTLSM AIRTEMYCANTPFYTSDLDAAATTPAARLHERLRTVYMTGFYGIRGQLELAHRILRST VALDRLIIDPTRKVDHDFRNQAYAGMGRTMATLY</aaseq>

Gene Sequence

<dnaseqindica>1..105#574..1485#1816..2079#atgagagccgtggttcatggtaaggggacaaagagtgaaggctgtgccaggatcaatatgaagaagaggatatcccaggcttttcgacttcaccggctacctcctgtaagtaaagccatgacttacagagttacagtaagctaattacagtgggactatatactgcatactcattgatttatcgctagcctcgtgcatgtacatatcttttaatgtaattgcaagaaatatatgatttgttttgtagagctttaacttctaaatttagctccgggagttagatcgggagtggagttgtggagcagcctaaacccagttccatatctctagttcattttgtgagagcgctacactctacacccacgtcagttctcattttaggtggaactgaaattgtttggttgggctccagctcaaagagaagtggagttggagctagtactgtgccaaacagtcccatattgtgctaaactgctatctctaaaggcttaaagcatgttggtcaagaaatgagttattttcctttagaaagacaaaactctagcttatttaatttgtgtcatgtttctgcaggatgttttgcgtgtcatactatcacaattgtcattcaaagaagctgcacgtacaagcgttgtgtccaggaagtggaaacggctttggagatgctacccaaagctggtcttgaccggagatatgatgcttggcagcagcagcaatgctgcaggagaccacccaacatcgaataaaacaacatttatcaggcgtgccaacagtatcgtgcggcagctatcatcaccatcagctacgctcaacaagttcatagtgaaatttcccctcctccaaagcgacgcagatcacatcgacagatgggtcagcttgtcagcatcatcaagagcaaggcgaattgttcttgatctgtgcccagaactcgagaagttcggtgacaaagaccaaatgtacagcttccctcttcatcttttcagtgttggtggtagtaattcttgcgtcaagtctctctgcctaggctttgtctccctgaatctgcttcatcagctgtctcctgctggtaataccaatcgcttgacaatcctgaagaagcttaccctgcacaaggtgtccattgctggtgatcttcagagcttgctcctggagtgcgatgttctcgagtggttaagcctcaccttctgctccctgcaacaccgtgatctggtcatccaacaccagcagccactgcagcgtctgcggcatctgcgtgtgctgcactgcaggctgcagaagctggagctgcaggctccgaatctgactgagtttgagtttgctaaccaccaggtgcctttggtgcttggtgattgcgtcaacatgtcgatggcgtcggttgggctgttgctgccgtcggatggcttcgactacgcctgcaccaagcttccgtttgctcttcctcatgtttgtgaccgtctcactctaagcatggcgatcagaactgaggtacgtttgtgctgcacatcttaattaatttcatggtacaaatactaccttcaaattataagaaccaatattagtattacaaatctagttaggagactatatccagattcatagcactggcatgtgtcttgtcccatactagattactatatcatggtacgaagggatcgaacagttgacaacttttatgatgatctttactggttcagtagaaacaatatggattgtcgatttgtgataatatattgttttacaatctccttggtttcttagaaacaaacaccacctatgatttccgcgtaattttcacactagtttgaatgcatgcagatgtactgtgcgaatacgccattctacacctccgatctggatgcggcggcgacaacgccggcggctcgtctccacgagcggctcaggaccgtctacatgaccgggttctacggcatccgtggccagctagagctggcgcaccggatactccggagcacggtcgctctcgaccgtctgatcatcgatccgacgcgcaaggttgaccacgatttcagaaaccaggcctacgcaggcatgggaaggaccatggctacactgtattaa</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0539700, RefSeq:Os11g0539700