BGIOSGA004995

From RiceWiki
Revision as of 11:14, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA004995| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA004995, complete gene.| tag = OsI_048...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA004995

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA004995, complete gene.

LocusTag

OsI_04814

Ensembl Transcript ID

BGIOSGA004995-TA

Ensembl Protein ID

BGIOSGA004995-PA

Length

3424

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:42935408..42938831

Sequence Coding Region

42935408..42935630,42935750..42935832,42935929..42936068,42936119..42936635,42936755..42936802
,42937063..42937237,42937809..42938028,42938215..42938374,42938463..42938831

Genome Context

<gbrowseImage1> name=IndicaChromosome01:42935408..42938831 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:42935408..42938831 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCGTCGATCGCCGGCGCCGGAGGCGGGCGCCTCTTCTCCGTGAACGGAGCCGCGGCCTACTGGGGCAGCAGCCGCCGCCGCCTCCTCCTCCTCCAGCGCCCGCTCTTCTCGTCCCTCGCCGGCGGCGGCACGGGAGACGACGTGACGCCGCATCTGCCCGTGGTCATCGTCGGAGCCGGCCCGGTCGGGCTCGTCCTCTCCTTCCTCCTCACCAAATTCGGGATCAAGTGCGCGGTTCTAGAGAAGAATGTGGAGTTCACTCGGCATCCGCGAGCGCATTTCATCAACAACCGCACCATGGAGATCTTCCGGAAATTGGACGGGTTGCCTGGGGACATTGAGAGGTCTCAGCCACCAGTGGATTTGTGGAGGAAATTTGTGTATTGCACTTCACTCTCTGGCTCCATTCTTGGTTCAGTTGATCACATGAAGCAGGAAGGCAGATCTGATGATTGTTTTGTTGCAGATTTTGACAAGATCATTAGTCCTATATCTGTTGCACACTTCTCACAGCACAAGTTAGTTGATTTGTTACTCAAGAAGCTGGATGGCATTGGCTTTCAGACATGCTTGCCTGGTGATATTGGTAGCTCGACTCAAGATTTGGTGTTGGAAAATAAGATTTTGATGGGTCATGAGTGTAGTTCTGTTCAACTGACAGACAAAGGCATTTTGATTGGAGCATCGTTTAACGAAGCGGGGAGGATGCAGGAAAGGAAGATTCATTGTGGGCTTCTTCTAGGGGCAGATGGTGCCAGAAGCACAGTGCGTGAATTGGCTGGCATACATATGAAAGGTCAGAGAGACCTGCAGAAACTGGTCAGTGTGCATTTTCGGAGCAAAGATCTCGGCAAGTATCTATCTCGTGAGAGGCCAGGGATGCTATTCTTTATTTTCAATCCTGGTGCAATCGGTGTGCTGGTTGCACATGACCTGGAACATGGAGAATTTGTATTGCAGATTCCATTTTATCCTCCCCAGCAGATGTTTGAAGATTTCAGCACAAAGATATGCGAGGAAATTATAGTCAAATTGGTTGGATGGGAGCCATCAGATGTTCAGGTTTTAGACATAAAACCATGGGTAATGCATGCTGAAGTTGCAGAGAAATACATTGGTTGCGACAATCGTATAATCCTTGTTGGTGATGCTGCTCATCGTTTTCCTCCTGCTGGCGGTTTTGTGCACCAAGTAATTAACAGCAGCCTAGGATCAGTCATTCCAAGAAATCTGCAGAAATCGGTTTTGGAAGGATTATTTTCCATTGGTCGGGCACAGGTTTCAGACTATATTTTGAATGAGAAAAATCCCCTTGGATCCTTGAGATTAGCAAGATTGAGAAGCATTCTTGATGAAGGCAAAAGTCTACAGCTGCAGTTCCCAGCAGAGGATCTTGGCTTCCGTTATGAATTAGGAGCGCTTGTTGCTGAAGATTGTGCTGAAACCACTTATGAAGCAGAAAAGCAGAAGCATTCTAAGAGGTCAAGAGAGTACATCCCCTCTGCTAAGGCTGGCTCACGGCTTCCACATATGCTAATGAGAGCATTGTCCACTTCAAACGAGGGTGTGTTCTCAACTCTGGATCTAGTAAATGGGGACAAGCCTGAGTTTGCTCTTATCATTGCCCCATTGAAAGTGTCATATGAGCTTGCTCGTGCTATGCTGAAGATAGCAGATGAACTCAAGTTACCAACCAAAATTTGTGTTATATGGCCACAAGGTTCAGTTGATGCTAAAGTGAAAGGGAGCAGATCGGAGTTGGCACCATGGACAAACTATGTTGATGTCGAAGAAGTACCTAGAGCTCCTGTTAATTCTTGGTGGGAGATGTGCCAGATAACTAGTAAAAGTGTAATTTTGGTTAGGCCTGACGAGCATATAGCATGGAGAACAGAATCTCGACAGGGTGACAGATGCAGATTCAGAAGTTAG</cdnaseq>

Protein Sequence

<aaseq>MPSIAGAGGGRLFSVNGAAAYWGSSRRRLLLLQRPLFSSLAGGGTGDDVTPHLPVVIVGAGPVGLVLSFLLTKFGIKCAVLEKNVEFTRHPRAHFINNRTMEIFRKLDGLPGDIERSQPPVDLWRKFVYCTSLSGSILGSVDHMKQEGRSDDCFVADFDKIISPISVAHFSQHKLVDLLLKKLDGIGFQTCLPGDIGSSTQDLVLENKILMGHECSSVQLTDKGILIGASFNEAGRMQERKIHCGLLLGADGARSTVRELAGIHMKGQRDLQKLVSVHFRSKDLGKYLSRERPGMLFFIFNPGAIGVLVAHDLEHGEFVLQIPFYPPQQMFEDFSTKICEEIIVKLVGWEPSDVQVLDIKPWVMHAEVAEKYIGCDNRIILVGDAAHRFPPAGGFVHQVINSSLGSVIPRNLQKSVLEGLFSIGRAQVSDYILNEKNPLGSLRLARLRSILDEGKSLQLQFPAEDLGFRYELGALVAEDCAETTYEAEKQKHSKRSREYIPSAKAGSRLPHMLMRALSTSNEGVFSTLDLVNGDKPEFALIIAPLKVSYELARAMLKIADELKLPTKICVIWPQGSVDAKVKGSRSELAPWTNYVDVEEVPRAPVNSWWEMCQITSKSVILVRPDEHIAWRTESRQGDRCRFRS</aaseq>

Gene Sequence

<dnaseqindica>1..223#343..425#522..661#712..1228#1348..1395#1656..1830#2402..2621#2808..2967#3056..3424#ATGCCGTCGATCGCCGGCGCCGGAGGCGGGCGCCTCTTCTCCGTGAACGGAGCCGCGGCCTACTGGGGCAGCAGCCGCCGCCGCCTCCTCCTCCTCCAGCGCCCGCTCTTCTCGTCCCTCGCCGGCGGCGGCACGGGAGACGACGTGACGCCGCATCTGCCCGTGGTCATCGTCGGAGCCGGCCCGGTCGGGCTCGTCCTCTCCTTCCTCCTCACCAAATTCGGTAACCCCCACTCCGCGCCTCCCGGTTCCAGTCGCGCTCAGCTGAAGGAGATTTTGCTTCTGTGGCAAGAGCTGCATCCCGTTGACGCGCTGCTCTCCTCTCTGTCTGAAATCTCGCAGGGATCAAGTGCGCGGTTCTAGAGAAGAATGTGGAGTTCACTCGGCATCCGCGAGCGCATTTCATCAACAACCGCACCATGGAGGTGTGTTGACCGCGTTCGCCAACATTTCCATTTCAGATGTATTTGTTTCGTGTTCTGTTAGTCAGTGTGGTTTGGTTGGAGGGATGATATGAACAGATCTTCCGGAAATTGGACGGGTTGCCTGGGGACATTGAGAGGTCTCAGCCACCAGTGGATTTGTGGAGGAAATTTGTGTATTGCACTTCACTCTCTGGCTCCATTCTTGGTTCAGTTGATCACATGAAGCAGGAAGGCAGGTTTAGTTCTTCTGTCATGGTATCCTGCATCTTTGTGCAATTTCACATAGATCTGATGATTGTTTTGTTGCAGATTTTGACAAGATCATTAGTCCTATATCTGTTGCACACTTCTCACAGCACAAGTTAGTTGATTTGTTACTCAAGAAGCTGGATGGCATTGGCTTTCAGACATGCTTGCCTGGTGATATTGGTAGCTCGACTCAAGATTTGGTGTTGGAAAATAAGATTTTGATGGGTCATGAGTGTAGTTCTGTTCAACTGACAGACAAAGGCATTTTGATTGGAGCATCGTTTAACGAAGCGGGGAGGATGCAGGAAAGGAAGATTCATTGTGGGCTTCTTCTAGGGGCAGATGGTGCCAGAAGCACAGTGCGTGAATTGGCTGGCATACATATGAAAGGTCAGAGAGACCTGCAGAAACTGGTCAGTGTGCATTTTCGGAGCAAAGATCTCGGCAAGTATCTATCTCGTGAGAGGCCAGGGATGCTATTCTTTATTTTCAATCCTGGTGCAATCGGTGTGCTGGTTGCACATGACCTGGAACATGGAGAATTTGTATTGCAGGTATTCCACATTAACAGACTCGTGCTTATTGTGGCTTTTATGATGTTGTATGCTAGATGGTTGATGTGAACTTATCTTGTGCTTTATTTGTATTCACTTTATCTACTATATATTTTCAGATTCCATTTTATCCTCCCCAGCAGATGTTTGAAGATTTCAGCACAAAGGTGGTTCCCGTTGGATATTTTTCTCTTTTTCAATTCATCAGCATTTCTTGCCTCATTCACATGTACAACTTGTATCAAATTGTATATAAGCTTTTTTTTTCTTCTGAAATATATATTTATAAGTATTCTTAAATCAACTTTAGTATCTTCTTGCTATTTCTATCCTCAGAATTGAACATGTGGTGCATAGCCATTCGCTAACATGATATGCTTGCATCCATGCATAATCTTTTTATATGCTTCCTATTTTGTGATTCTAGATATGCGAGGAAATTATAGTCAAATTGGTTGGATGGGAGCCATCAGATGTTCAGGTTTTAGACATAAAACCATGGGTAATGCATGCTGAAGTTGCAGAGAAATACATTGGTTGCGACAATCGTATAATCCTTGTTGGTGATGCTGCTCATCGTTTTCCTCCTGCTGGCGGTTTTGGTTAGTGTATAACTTTCAGTTTTGGTACTGAAAGATCACCATGTGAAGTTGCTTAATTATGCACTTATGTATCTGAAGTGTCTAAAGCTGTGCACGTCGGGATCTCTATTTGCAGGAATGAACACTGGTGTCCAGGATCGCACACAATTTGGCTTGGAAATTGTGCTTACTGCAGAATGGTGTTGTTTCACCATCAATATTACAGACTTATGAATCAGAGCGCCGACCTGTTAGACTCTCCTCACACTCACAGGCTTTCTACAATCCAATTTTAATCTGTCGCAAATTCATGAATAATGATATGCATGATTGCTAATTGCAGGTTGCCATTTTCAATACAGAACTTAGTGTGGAAATTTCAAAGCAGCTATGTCTATTCCTGCAGCCCTTGGTCTTGACCCAACAGTTGCAAATTCAGGTGAAATGTCCTGCCTGTGCAAGAGGGCTATGCACATTTTTGTTATTTTCAAGTAAAATATTGGCAGTGTGTACAACTGTTTTTAGGTGATAGTTGAATGCTAAGTAATGTGTTATCATCTCATTTTATGTACCCTTTGCATGTATTTGCCAGTGCACCAAGTAATTAACAGCAGCCTAGGATCAGTCATTCCAAGAAATCTGCAGAAATCGGTTTTGGAAGGATTATTTTCCATTGGTCGGGCACAGGTTTCAGACTATATTTTGAATGAGAAAAATCCCCTTGGATCCTTGAGATTAGCAAGATTGAGAAGCATTCTTGATGAAGGCAAAAGTCTACAGCTGCAGTTCCCAGCAGAGGATCTTGGCTTCCGGTAAGCTTCATTACAGTGAATGATTTGTCAAGAATTTTGATATTTTTACTTTCACAAATTTTGTTGATGGGACATAGGGACAGCACAAATGATAAAGTAGATCACACACTTCTAGAATTAGTGCTGCATTTTCAATAACATTTACTATGTCTGGTTTCTTATGCTAACTAACTTCTGCACTTCCAGTTATGAATTAGGAGCGCTTGTTGCTGAAGATTGTGCTGAAACCACTTATGAAGCAGAAAAGCAGAAGCATTCTAAGAGGTCAAGAGAGTACATCCCCTCTGCTAAGGCTGGCTCACGGCTTCCACATATGCTAATGAGAGCATTGTCCACTTCAAACGAGGTTTGCTCAATTCACCACCTATTTGATGTACACATTTTTAGCTAATATTCTACATGTGTAAATTGTGTACTCCAATGGGCTCTTTCAGGGTGTGTTCTCAACTCTGGATCTAGTAAATGGGGACAAGCCTGAGTTTGCTCTTATCATTGCCCCATTGAAAGTGTCATATGAGCTTGCTCGTGCTATGCTGAAGATAGCAGATGAACTCAAGTTACCAACCAAAATTTGTGTTATATGGCCACAAGGTTCAGTTGATGCTAAAGTGAAAGGGAGCAGATCGGAGTTGGCACCATGGACAAACTATGTTGATGTCGAAGAAGTACCTAGAGCTCCTGTTAATTCTTGGTGGGAGATGTGCCAGATAACTAGTAAAAGTGTAATTTTGGTTAGGCCTGACGAGCATATAGCATGGAGAACAGAATCTCGACAGGGTGACAGATGCAGATTCAGAAGTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA004995