BGIOSGA005015

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Revision as of 11:15, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA005015| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA005015, complete gene.| tag = P0497A0...")
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Gene Name

BGIOSGA005015

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA005015, complete gene.

LocusTag

P0497A05.18

Ensembl Transcript ID

BGIOSGA005015-TA

Ensembl Protein ID

BGIOSGA005015-PA

Length

2672

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:43254998..43257669

Sequence Coding Region

43254998..43255103,43255276..43255500,43255628..43255722,43255845..43256037,43256446..43256786
,43257189..43257419,43257517..43257669

Genome Context

<gbrowseImage1> name=IndicaChromosome01:43254998..43257669 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:43254998..43257669 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTGCTTCATCGCTCGACGCCGAGGCAGCAGCTGCAGGCCAACAAGACAAGGCCGGCAGCGGCAGCTACACCACTGCAGCCACTGCTCATCAAATAGACACAGATTCATGGCAGCAGGTAGGGGTGCTGCTGGTGGTGGGGTTCAACTGCGCCTACGTGCTGAGCTTCTCCAACCTGATGATGGCGCCGCTGGGTTGGGGGTGGGGCATCGCCTGCCTGCTGTTCATCGGCGCCGCCTCCTGGTACGCCAATTGGCTCCTCGCCGGCCTCCATGTCATCGACGGCCAGAGGTTCATCCGCTACAGGGACCTCATGGGCTTCGTCTTCGGGAGGAAAATGTACTACATCACTTGGTTCCTGCAGTTCATCACCCTGATACTCGGAAACATGGGCTTCATTCTGCTAGGCGGAAGAGCACTCAAGGCGATACATGCGGAGTTCAGCAGCAGCCACTCACCGGCGAGGCTCCAGTGGTTCATCGCTGCAACCGGATTCGTCTACTTCGCCTTCGCCTACTTCGTGCCGACCATTTCCGCCATGAGGAACTGGCTGGCCACGTCCGCCGCACTGACCGTCGCCTACGACGTCGCCCTCATTGTCATCCTAATCAAAGACGGGAAATCGAACAAGCAGAAGGACTACAATGTCCACGGGACGCAGGCAGAGAAGGTGTTCGGCGCGTTCGGCGCCATCGCGGCCATCCTCGTGTGCAACACCTCCGGGCTGCTGCCGGAGATACAGTCGACGCTGCGGAAGCCGGTGGTGTCCAACATGCGGCGGGCGCTGCTGCTGCAGTACACGGCCGGGGCGGCGGTGTACTACGGGATCAGCGTGGCCGGCTACTGGGCGTACGGCGCCGCCGTGTCGGAGTACCTCCCCGACCAGCTCAGCGGGCCCAGCTGGGCCACCGTCCTCATCAACGCCACCGCCTTCCTCCAGAGCATCGTCTCGCAGCACCTGTTCACGGTGCCGATACACGAGGCGCTGGACACGCAGATGCAGAGGCTGGACGAAGGGATGTTCTCGCGGTACAACCTCGGGAGGCGGCTGCTGGCGAGGGGGCTCGTGTTCGGAGCCAACGCCTTCGTCACCGCGCTCTTCCCCTTCATGGGCGACTTCGTCAACCTCTTCGGCTCCTTCGTCCTCTTCCCTCTCACCTTCATGTTCCCCAGCATGGTCGTCCTCAAGATCAAAGGGAAGGATGAAGCAGGGAGATGGAACAGGATTTGGCACTGGGGCATCATCGTCGCCTCCTCCGTCCTCAGCGTCGTCACCACCGCCGCCGCCGTCCGTCTCATCGTCCACAACGCCAGCGTCTACCATTTCTTCGCGGACATGTAA</cdnaseq>

Protein Sequence

<aaseq>MAASSLDAEAAAAGQQDKAGSGSYTTAATAHQIDTDSWQQVGVLLVVGFNCAYVLSFSNLMMAPLGWGWGIACLLFIGAASWYANWLLAGLHVIDGQRFIRYRDLMGFVFGRKMYYITWFLQFITLILGNMGFILLGGRALKAIHAEFSSSHSPARLQWFIAATGFVYFAFAYFVPTISAMRNWLATSAALTVAYDVALIVILIKDGKSNKQKDYNVHGTQAEKVFGAFGAIAAILVCNTSGLLPEIQSTLRKPVVSNMRRALLLQYTAGAAVYYGISVAGYWAYGAAVSEYLPDQLSGPSWATVLINATAFLQSIVSQHLFTVPIHEALDTQMQRLDEGMFSRYNLGRRLLARGLVFGANAFVTALFPFMGDFVNLFGSFVLFPLTFMFPSMVVLKIKGKDEAGRWNRIWHWGIIVASSVLSVVTTAAAVRLIVHNASVYHFFADM</aaseq>

Gene Sequence

<dnaseqindica>1..106#279..503#631..725#848..1040#1449..1789#2192..2422#2520..2672#ATGGCTGCTTCATCGCTCGACGCCGAGGCAGCAGCTGCAGGCCAACAAGACAAGGCCGGCAGCGGCAGCTACACCACTGCAGCCACTGCTCATCAAATAGACACAGGTGCAAGCATATCCATGGTGATCGATGAACAAACCAGCAATTCTTGATCTTATCCGTTCGATTTATAGCAACAAGAAGCATCAGGATCCACGCATTCTTGACACATATATTGAATTGTTAATTATTGATCGGTTTTAGTTTAATCGTTGGACATGTACACATGTGCATGCAGATTCATGGCAGCAGGTAGGGGTGCTGCTGGTGGTGGGGTTCAACTGCGCCTACGTGCTGAGCTTCTCCAACCTGATGATGGCGCCGCTGGGTTGGGGGTGGGGCATCGCCTGCCTGCTGTTCATCGGCGCCGCCTCCTGGTACGCCAATTGGCTCCTCGCCGGCCTCCATGTCATCGACGGCCAGAGGTTCATCCGCTACAGGGACCTCATGGGCTTCGTCTTCGGTGCGTTTCATGTCAGAGAAATTGGGTTGATTAATTAGTGAGATGAATAGATGATTAAGTTAGCTGGAGGCTGAAAATGCAGCTGACGAACCTTGTTAATTTACACGGTTTTGTTTGTTTTGTGAAGGGAGGAAAATGTACTACATCACTTGGTTCCTGCAGTTCATCACCCTGATACTCGGAAACATGGGCTTCATTCTGCTAGGCGGAAGAGCACTCAAGGTACAAAATTTGCTGTTAATTGTATCGAATATCCGATTAGCTGTCTATCTATGACCAATTGTAAGCTCGCAGTTTAGTTAGCCGATTTAGTTATTCATTTTTTTTTTCACTGCAACCTGCAGGCGATACATGCGGAGTTCAGCAGCAGCCACTCACCGGCGAGGCTCCAGTGGTTCATCGCTGCAACCGGATTCGTCTACTTCGCCTTCGCCTACTTCGTGCCGACCATTTCCGCCATGAGGAACTGGCTGGCCACGTCCGCCGCACTGACCGTCGCCTACGACGTCGCCCTCATTGTCATCCTAATCAAAGACGGTAATCACTAATCACTACAGTATAGTACTACATGTCTCAAGTATTCTCTGTTGCGGTGCTCTATAATAGTAGAAAACAATCTAAACAGTTAATCTTATTTGATCAAATGGTTCATATTTACATTATCACCTTATTAGTTAGTAATAGAAATATGAAGAGATATTATTATCTAAGAAAAATATGTGCGGAGAGATATAATTGTCATTAGCAGTGACTAAACTACAGTAACATAAATTAATTATAGTTACTACTATTATTAATCATGGTATTAGTAAATTACTAATTTACCCCTAATAATACTCTCAGCAGAGAACACCAGAGTATTAATCTTTGATTTGATCATACATGTTCATGCAGCATCTGATCGATCGAACAGGATTTATATGTTTTTTTTGGTTTCGCATTTAGGGAAATCGAACAAGCAGAAGGACTACAATGTCCACGGGACGCAGGCAGAGAAGGTGTTCGGCGCGTTCGGCGCCATCGCGGCCATCCTCGTGTGCAACACCTCCGGGCTGCTGCCGGAGATACAGTCGACGCTGCGGAAGCCGGTGGTGTCCAACATGCGGCGGGCGCTGCTGCTGCAGTACACGGCCGGGGCGGCGGTGTACTACGGGATCAGCGTGGCCGGCTACTGGGCGTACGGCGCCGCCGTGTCGGAGTACCTCCCCGACCAGCTCAGCGGGCCCAGCTGGGCCACCGTCCTCATCAACGCCACCGCCTTCCTCCAGAGCATCGTCTCGCAGCACGTACATATATCATATACCACCTTCTTCTCCTCCTCCCCATTGATGGCGTGAGAGCTCAGCCTAGAACAAATTAATTAAGCTTTAAGCGGATTGATACATTTTAGAAACGTGGAGCAAATAATCCATATTAACAATTCGACAAATAATATGAAAAGAAGCCATAATGATGTAGAACGAAAAAGGTGTATGATTGGTTGAGTATTATTCACTAAAAAAATTTAAAAAAGATTTATTTAATTTTTAAAGCATTTTTTAAAAAATATTTTCAAAAAAATATTGTTTAACGGTTTGAAAAATATGCTAATAACAAAATTGTAGAGTAACTAAGTTGAATTTTAGCTCTTTAGGGTAGGGCGTTTAATTTGCCGTGGATTAATGCGTGCGTGCGTGCGGGTGGAGCAGCTGTTCACGGTGCCGATACACGAGGCGCTGGACACGCAGATGCAGAGGCTGGACGAAGGGATGTTCTCGCGGTACAACCTCGGGAGGCGGCTGCTGGCGAGGGGGCTCGTGTTCGGAGCCAACGCCTTCGTCACCGCGCTCTTCCCCTTCATGGGCGACTTCGTCAACCTCTTCGGCTCCTTCGTCCTCTTCCCTCTCACCTTCATGTTCCCCAGCATGGTCGTCCTCAAGGTATGACGACACATTTCTGTTGAGAAATTGATAGCACTATAATTCTATCAAGATCATGATGGATGGATGGATGGATGGATGGAATGGTGATGTGCAGATCAAAGGGAAGGATGAAGCAGGGAGATGGAACAGGATTTGGCACTGGGGCATCATCGTCGCCTCCTCCGTCCTCAGCGTCGTCACCACCGCCGCCGCCGTCCGTCTCATCGTCCACAACGCCAGCGTCTACCATTTCTTCGCGGACATGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA005015