BGIOSGA005030

From RiceWiki
Revision as of 11:15, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA005030| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA005030, complete gene.| tag = P0470A1...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA005030

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA005030, complete gene.

LocusTag

P0470A12.29

Ensembl Transcript ID

BGIOSGA005030-TA

Ensembl Protein ID

BGIOSGA005030-PA

Length

3682

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:43467818..43471499

Sequence Coding Region

43467818..43467976,43468070..43468122,43468231..43468297,43468397..43468452,43468755..43469259
,43469451..43469539,43470148..43470238,43470522..43470647,43470726..43470983
,43471218..43471499

Genome Context

<gbrowseImage1> name=IndicaChromosome01:43467818..43471499 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:43467818..43471499 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCGGCGGCGGCGGGGGAGGAGGCGGAGAGCTCTGCCGCCGGCGAGCAGCGGCGCATGCCCTTCGCTCGTGGCGGGCCCGTGTTCGTCCCCTTCATGGTCGGACCCGTCTCCACGGTCCCCGAGTTCATGTCCTCCGCGCTCCACGAGCTGCAGTCGCTGAAAGATGAATTGGGCGATCCTGGTGATGAATTCGACGAAGAGCTCTGCGTAGATGAGTTGAGGGTCCTCTCAGAGGAGGAGCTGGTGGAGCGCGCTCTCCGGGAGGCTATGGAGGAGGGCTGGGATTCCACTGCTTTGTCACAGCTGGAGGATCAGAGGATTGATGGAGGAATGTCAGCTAGTTCCACCTTTGGAAATGGTGCTATCACATCAAGCTCATCAGGTGAGAGAGAGACTTCCAGATCACCTACTGAGGATACGGCAAGCATACCACATGTGCATGGAAACAACGGTAAAACAAGAGGGGTAAAAGGGGAAACTAGAGGCAGGAAGCGAAAAAATGTCACTCCGACCTTAAATTCGTCAGTTGAAACGGAGATACCTGGACCATCTGTTGACGCAGCAGTTGTACCATACGTACCACAACAAGGCATCGAAGGGAAAACAGGTGGCATGAAGGGGAAATCCAGAGGAAGAATGAAAAAAGGTGGAAATACCACTTCAAATTCATTAGGCGAGAATCTGGAAGTTGTTTCACATGAGTCTGTACCACCTGTCGAGGATCTGGAAGTTGTTTCACATGATGCTGCAGGCGCAGATGGAGATACAAAATGCGGAAAGGGCAAAAAGAGAGGCAGGCATTTTGATAGAGAAGTTCGAGCACATATTTTACAAGGGAGCTATCTTACTAAAGCAGTGAAGATGGCAGAAATTAAGGCCAAACAAGAGGAAGACAAACATGCAGCCAGCTTGCACTCATTCAGTGGTGATTCTGTGTTGGCCAAAGTTTCTAAGCCATCAGCTGAGAAAGTTGATGTTGCAAAATCTCTTAGGTACATCAGCACAACTTGGAAGAGCCAGGAATTTCTAGTGTTGGGAAGCCAGCTCCTTACAGATCTTAGAGACAATATTTACTGTTTCAAAGACAAGCTGATGAATGTGGCAAAGCAACACGTTCATTCTGGTTATTTTCTTATTGAGGACACATTCTATAATGACACAAGGCGTTCTACTGTTGATTATAGTAAACCTATACTTGACTGGATTAAAAATTCCAGAAATGAGGCGGAAGAGAAGTGGGATGCCATTACTTCTGGTGTGCTGAAGAAACGACAAAAGGATTTACTGATGGGTTTGAATGTTTCAAATGTTCCTGATTTTAAATCTGCAAAAATGGAAAAGACTCGCTTTTCTGATCTGAACTTCCGTCTCGGTGCTGGGTACCTCTACTGTCATCAGGGGAACTGCAAACACATGATTGTGATCAGAGACATGAGGTTGATCCACCCGGAGGACACACAGAACCAAGCGGAATACCCTCTCATGACATTCCAGATGCAGAGGCGGCTACAGAAGTGTTCGGTGTGCCAGATCTTCCATGCCACGAAGATGACGGTGGACGACAAGTGGACTCTGAACAATCCCTGTTATTTCTGCGACAAATGCTACTACCTCCTCCACTACAAAGAGGACAACTCACTACTTTATCACCATACTGTATATGATTACCTCCAGGAGTAA</cdnaseq>

Protein Sequence

<aaseq>MAAAAAGEEAESSAAGEQRRMPFARGGPVFVPFMVGPVSTVPEFMSSALHELQSLKDELGDPGDEFDEELCVDELRVLSEEELVERALREAMEEGWDSTALSQLEDQRIDGGMSASSTFGNGAITSSSSGERETSRSPTEDTASIPHVHGNNGKTRGVKGETRGRKRKNVTPTLNSSVETEIPGPSVDAAVVPYVPQQGIEGKTGGMKGKSRGRMKKGGNTTSNSLGENLEVVSHESVPPVEDLEVVSHDAAGADGDTKCGKGKKRGRHFDREVRAHILQGSYLTKAVKMAEIKAKQEEDKHAASLHSFSGDSVLAKVSKPSAEKVDVAKSLRYISTTWKSQEFLVLGSQLLTDLRDNIYCFKDKLMNVAKQHVHSGYFLIEDTFYNDTRRSTVDYSKPILDWIKNSRNEAEEKWDAITSGVLKKRQKDLLMGLNVSNVPDFKSAKMEKTRFSDLNFRLGAGYLYCHQGNCKHMIVIRDMRLIHPEDTQNQAEYPLMTFQMQRRLQKCSVCQIFHATKMTVDDKWTLNNPCYFCDKCYYLLHYKEDNSLLYHHTVYDYLQE</aaseq>

Gene Sequence

<dnaseqindica>1..159#253..305#414..480#580..635#938..1442#1634..1722#2331..2421#2705..2830#2909..3166#3401..3682#ATGGCGGCGGCGGCGGCGGGGGAGGAGGCGGAGAGCTCTGCCGCCGGCGAGCAGCGGCGCATGCCCTTCGCTCGTGGCGGGCCCGTGTTCGTCCCCTTCATGGTCGGACCCGTCTCCACGGTCCCCGAGTTCATGTCCTCCGCGCTCCACGAGCTGCAGGTTCGAATCCCCTTGAGCACACCGCCAAACCCTAGCTCTTCAATCCGTGCCCTTGCTTTGGTGTAATCGCGTTCTGTGTTACTTTGCGAGCAGTCGCTGAAAGATGAATTGGGCGATCCTGGTGATGAATTCGACGAAGAGCTCTGGTAAGCCCCCCAAATTCCGCCGTATCAGGTGGAGAAATCCCCCAGTGTCTGTCATGTTGTTCATATGCTTATTCGTGTTCTGGTTTGTACATTTTGTGGATTCTGCAGCGTAGATGAGTTGAGGGTCCTCTCAGAGGAGGAGCTGGTGGAGCGCGCTCTCCGGGAGGCTATGGAGGTGACCGTTCCTATCGAGCTTGTGCTAATGTGCTTAATTGTAGTTCTAGTTTTGTGAACAATATTTTGATGTGATGTCTCTGTTATTTGGTGTTTTTAGGAGGGCTGGGATTCCACTGCTTTGTCACAGCTGGAGGATCAGAGGATTGATGGAGGGTAAGCTATTTTTGCTTGATTGGTGCTTCTTTTATGCGAGTTGGAATTAGATGCAACACGGACGGTTAATTGTTGGATAGCGTCATTCCATGCCAACTCATAAAGAAAGTTCTATTGTGAATTGGTAGCATGGAACAGCGGTTTGCACTTTATGCACCAAATCATCTCTTTTCAATTTTTATGGCTTGTAGCTGAATTCCTGGCATCTAAATTTTCTTTTCATATTATTATATTTAATATTCATGTCTTATGTGGCTCACAAAATAATAGGGTCTGATGTTCTTTCGAACTATCACATGCAGAATGTCAGCTAGTTCCACCTTTGGAAATGGTGCTATCACATCAAGCTCATCAGGTGAGAGAGAGACTTCCAGATCACCTACTGAGGATACGGCAAGCATACCACATGTGCATGGAAACAACGGTAAAACAAGAGGGGTAAAAGGGGAAACTAGAGGCAGGAAGCGAAAAAATGTCACTCCGACCTTAAATTCGTCAGTTGAAACGGAGATACCTGGACCATCTGTTGACGCAGCAGTTGTACCATACGTACCACAACAAGGCATCGAAGGGAAAACAGGTGGCATGAAGGGGAAATCCAGAGGAAGAATGAAAAAAGGTGGAAATACCACTTCAAATTCATTAGGCGAGAATCTGGAAGTTGTTTCACATGAGTCTGTACCACCTGTCGAGGATCTGGAAGTTGTTTCACATGATGCTGCAGGCGCAGATGGAGATACAAAATGCGGAAAGGGCAAAAAGAGAGGCAGGCATTTTGATAGAGAAGTTCGAGCACATATTTTACAAGTATGCCTTACCCTAATGTTGCATCTCTGCTTAATTGCATGCATTTTCTGATGAATTTATCTTGTATAGTAGTTTTCTCTAAAAATATATATATATACATATTTCCCTCTTCTTCTTGCATCTATTGTTAATCTCTGGAAAATCTGACCATGGTTTTGCGTCATCATATGTTGTGGCATGGCTATAACTAGGGGAGCTATCTTACTAAAGCAGTGAAGATGGCAGAAATTAAGGCCAAACAAGAGGAAGACAAACATGCAGCCAGCTTGCACTCATTCAGGTAAAACAGTTAACTTTGTGGGCATGTATTTATTTGACCTTGATTTGTGGGTATGTATTGTTAGTAATTCCATTTTCTGATTGTGCCATAAGCTCATAGATATATATTATTTAATTTTCTACCGAATGGGATGGTGTTATCACAGCTTTGCTGAAGAGCTGTGGAATTTCTGTTGATAAGTAATTTGAACTTTTACTGATGGGCTGTGGCAAATAACAGTGTAAAAGTAATGTAAATCGTTCTTTGTGGTTCAGATGCTAGCAGGATGCAGCCCAGTTTGGCTAGATTCATGTTTCAGTAAAAAATTGGTACTTCTGTGCTGGCTGAACTAACTAGGTATAGAAATTTACCTCCACTTAATACTGGATTTTGATTAGCCCATACATTTACTCATGTATCCTATTTATTAGCCCATTTATGTAAATCATATATGGTATGCCCGGTAGGAATAGTTTGCTTCCTTTTTATAACTGAGCCACTAGAGAATAAGATAAGTATAAAATACAGCTGTCCAGGCTATGCACTTATGGCCATAACTAGATGATTTGATTTTATCTGTTATATTGTTTTCATTACAGCCTTCTATAAACATATTTTTTTGAACGCAGTGGTGATTCTGTGTTGGCCAAAGTTTCTAAGCCATCAGCTGAGAAAGTTGATGTTGCAAAATCTCTTAGGTACATCAGCACAACTTGGAAGGTTTGCATTAAAAACTATAGCCTATTTCATTTGCTCTTTTACACAAGTGGCTCATTTGTCTCAAATTTCACACTAACCATTTTTGTTATCCCAGAACAAAACTTTCAAACCTGGGGAGCACAGACCTGTAGTCTATCCAGAAGTACTTCTGTGTGTGGAAGTTTATGAGAAGAGATATGGCTCTGTGAAAGTAATGACTTATATACATATATTTTTTGGTATACTTATTTGTAGGGTGAAATATGTGGGGAATAAATTTTTTGGTGATCTCCTTTCCTTGCAGAGCCAGGAATTTCTAGTGTTGGGAAGCCAGCTCCTTACAGATCTTAGAGACAATATTTACTGTTTCAAAGACAAGCTGATGAATGTGGCAAAGCAACACGTTCATTCTGGTTATTTTCTTATTGAGGTATGCATCTGTGAACAGAAATTTGCTGTGTGTTCTTAAAGAATTGCAACTGTATTAATCAACGCTCTCTATTGTCAGGACACATTCTATAATGACACAAGGCGTTCTACTGTTGATTATAGTAAACCTATACTTGACTGGATTAAAAATTCCAGAAATGAGGCGGAAGAGAAGTGGGATGCCATTACTTCTGGTGTGCTGAAGAAACGACAAAAGGATTTACTGATGGGTTTGAATGTTTCAAATGTTCCTGATTTTAAATCTGCAAAAATGGAAAAGACTCGCTTTTCTGATCTGAACTTCCGTCTCGGTGCTGGGTACCTCTACTGTCATCAGGTTCTTATCTATTCTCCTTATGCCTTTATTGTTGTGATGTTTCTGCATCACTTTTTTTGTGGAAATCAAATCGTCATTTAGTCACAATCAAACCTTGTGTTGTTTGTTATCTATGTTTTGTGATGAAATCTAAAATCGATTAACTTGAAGCTGTAGTAATGTATGATGGTTGAGGTAGAGATCTACAACCCTTTCCCCCATGTTTCTGACAATACCCTGCACATACGTTTTCAGGGGAACTGCAAACACATGATTGTGATCAGAGACATGAGGTTGATCCACCCGGAGGACACACAGAACCAAGCGGAATACCCTCTCATGACATTCCAGATGCAGAGGCGGCTACAGAAGTGTTCGGTGTGCCAGATCTTCCATGCCACGAAGATGACGGTGGACGACAAGTGGACTCTGAACAATCCCTGTTATTTCTGCGACAAATGCTACTACCTCCTCCACTACAAAGAGGACAACTCACTACTTTATCACCATACTGTATATGATTACCTCCAGGAGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA005030