BGIOSGA005062

From RiceWiki
Revision as of 11:15, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA005062| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA005062, complete gene.| tag = P0678F1...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA005062

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA005062, complete gene.

LocusTag

P0678F11.26

Ensembl Transcript ID

BGIOSGA005062-TA

Ensembl Protein ID

BGIOSGA005062-PA

Length

2933

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:43937438..43940370

Sequence Coding Region

43937438..43937557,43937638..43937695,43937831..43937886,43938125..43938225,43938385..43938454
,43938550..43938619,43939019..43939075,43939159..43939226,43939307..43939387
,43939523..43939600,43939693..43939848,43939923..43939982,43940302..43940370

Genome Context

<gbrowseImage1> name=IndicaChromosome01:43937438..43940370 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:43937438..43940370 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCCGCCGCTCGCCGCGCCGCGCTTCCACGCCGCCGCGCTACCCCTCCGCCTCCGCCTCCGCACCCGCCCCCAGAAGCTCCCCTGCTGGCGCCGCGCCGCCCGGCCCAACGACGAGGATTACTACTTGATCGATGCGCCGGAGTCCATCGGGGACGGCTTCTCGTTCAGTGGGGGGAAGTATACGGATGGCCCGAGCAAGTCCGATGAGTGGTTTGCTCAAGGGAGAATGGTAAAAGCTCATCCAGTATACGGGAACAAAGGGAAGGCAAAAGATCCCATCTTTGGGCTCACAATGGGAGCTGAATCACAATCTTCAAATGATGTTTTCAGGTGGTTTTGTGTGGAGGCTGGGAGTTCTTCGAATCCTCCTGTTCTTTTTATTCATGGATTCCCATCTCAGGCGTACTCTTATCGAAATGTGCTACCTGTAGTATCAGACAATTATCATGCCATTGCTTTTGATTGGCTCGGTTTTGGGTTCTCAGATAAGCCTCAACCCGATTATGGTTTTGACTATACTCTTGATGAATATACATCGTCCTTGGAGTCTCTGATCAATGCTGTTGCTCCTGATAAGCTCTCCATTGTTGTTCAAGGGTACTTTGCTCCAATTGTAGTCAAATATGCTAATGAACATCAGGACAAGTTGAACCACCTGATATTAGTTAACCCACCGATAACGGATAAGCACGCGAAGCTTCCGTCCACCCTTGCATGTTTCAGCAATTTCTTGTTGGGTGAGATATTTTCCCAGGATCCTCTCAGAGCTAGTGATAAGGCCTTGACTAGTAGTGGCCCATACATGATGAAAGAAGAAGATGCAATGGTATACAGAAGGCCATACCTTGTCTCTGGTTCTTCTGGTTTTGCATTGAACGCAATCAGTAGAGCTATGAAAAAGGACCTTAAGGTTTACATTGAATCCATGAGGAATATATTATCGAGTGATTCATGGAAAACAAAAACGACAGCAGGGCACCATGTGCAGGAGGACCGTGGTGAAGAGCTAGGCAAGCTAGTCAAACGTATTCTAAGGTAA</cdnaseq>

Protein Sequence

<aaseq>MAPPLAAPRFHAAALPLRLRLRTRPQKLPCWRRAARPNDEDYYLIDAPESIGDGFSFSGGKYTDGPSKSDEWFAQGRMVKAHPVYGNKGKAKDPIFGLTMGAESQSSNDVFRWFCVEAGSSSNPPVLFIHGFPSQAYSYRNVLPVVSDNYHAIAFDWLGFGFSDKPQPDYGFDYTLDEYTSSLESLINAVAPDKLSIVVQGYFAPIVVKYANEHQDKLNHLILVNPPITDKHAKLPSTLACFSNFLLGEIFSQDPLRASDKALTSSGPYMMKEEDAMVYRRPYLVSGSSGFALNAISRAMKKDLKVYIESMRNILSSDSWKTKTTAGHHVQEDRGEELGKLVKRILR</aaseq>

Gene Sequence

<dnaseqindica>1..120#201..258#394..449#688..788#948..1017#1113..1182#1582..1638#1722..1789#1870..1950#2086..2163#2256..2411#2486..2545#2865..2933#ATGGCGCCGCCGCTCGCCGCGCCGCGCTTCCACGCCGCCGCGCTACCCCTCCGCCTCCGCCTCCGCACCCGCCCCCAGAAGCTCCCCTGCTGGCGCCGCGCCGCCCGGCCCAACGACGAGGTCCTGCACCAGCCGCCACACCAGGGCTTGCGATTTTGAGAGTTGGATTTGGTTTTTGATTCGGTGGGGTTTTTTTGCAGGATTACTACTTGATCGATGCGCCGGAGTCCATCGGGGACGGCTTCTCGTTCAGTGGGGGTGAGTTAGGGTTTGTTTCAGCATTGGGGAATCGGATCAGAGGCTGCAAATTTTAGTCCACATTAGTTGGGTTCTGACATCATGTCAATATTGGTATTCGCTAACTTGTTCCTATTCTGCGGGGGATCGGTGCAGGGAAGTATACGGATGGCCCGAGCAAGTCCGATGAGTGGTTTGCTCAAGGGAGAATGGTATAGTGTGATCACTCCCTGTTTTGATGTGTTGTTGTGCACTCATCACTTGCAGACTGTTTGATATCTAAACTACATAATCCAGAGTTTGACGGAGTGATTAGATTTTCCGTGTGCCTTTTGCTTGATAATGCACTGTCTCACCATGAGCATTTTCATTTCATCATATTCTTCATGTGGATGAGAGTAGGATTGTTCCAATATGCTAGTCAAAAATATGATGATACTTACATTACAGGTAAAAGCTCATCCAGTATACGGGAACAAAGGGAAGGCAAAAGATCCCATCTTTGGGCTCACAATGGGAGCTGAATCACAATCTTCAAATGATGTTTTCAGGTGAATTGAGCTATATAAGTGGTTAGCAGGGTGTCAGGTACAATAATAGTGACGGCATTTAGCCTTGTATTTTCAAGTCATTGGTCTCCTTTAGGATAAGTATATTAGTTCTTCAAAGATGATAATTGCTCTTGTGTGTTCTTTTTTACTGTGATGCAGGTGGTTTTGTGTGGAGGCTGGGAGTTCTTCGAATCCTCCTGTTCTTTTTATTCATGGATTCCCATCTCAGGTGGGATTTTGACTAGGTTTTTGCCTATGTTCTTCTTTTTCTACAAAAAAGTCTTCCAATACTGAATATATGCCTTTGGACTTTCTTGGTTACAGGCGTACTCTTATCGAAATGTGCTACCTGTAGTATCAGACAATTATCATGCCATTGCTTTTGATTGGCTCGGTGAGTTGCAGTGGTATGCACATTGTTTGATGCTTGACAAATGCAAAACTACTATTTAATTAAGTTGGCAGAAAAATGCAAAGTCATTCATATGTTTGGGAAAAAAATACATTTAGAAAATGTATTGCAATTACTGGTCATTATGACCAGGAGTCTATGCGTGCTGATCATACAAATTAGAATAGGAAACCATCTTTAGTACCTATTATCATCTTATTTTGACATTAATACTCAAGAACGTAAGAGTCATAATTTGTGTGGCTTTGCTTATAATCTTCTGTAAAGTTGTGCCATCGTACTGAACAACCATGCCTTTTTGGTTAATGCTGCTGCTCAGTTTGTAGGAGTAAGCATGTAGATATTTGCCTAACTTGAAAACAAAGAACTTTGTGTCTGCAGGTTTTGGGTTCTCAGATAAGCCTCAACCCGATTATGGTTTTGACTATACTCTTGATGGTAAAATTATCTACATAGTATCCTGTGTCTCCAAAATAAGTGTATTCAACTAATAATAACATAAACTACTATTTCCTTTCCAGAATATACATCGTCCTTGGAGTCTCTGATCAATGCTGTTGCTCCTGATAAGCTCTCCATTGTTGTTCAAGTACTTGTCATTAGCCATCCTGGATATGCCTATTATGAATCTCTAGGATCCTTGTTTATATGCAAACATACAACTTGCAGGGGTACTTTGCTCCAATTGTAGTCAAATATGCTAATGAACATCAGGACAAGTTGAACCACCTGATATTAGTTAACCCACCGGTGAGTTTTTTTTATTAGTAGCCACATAAGTTTTCTCTGATATTTTTGTGTGCTACATACTACGCAATCTTGTCTTGTAAAGCTTCATTATATCTTGAGAGTCATAGACTGATCACGAAATGCTTTTATATTTAGATAACGGATAAGCACGCGAAGCTTCCGTCCACCCTTGCATGTTTCAGCAATTTCTTGTTGGGTGAGATATTTTCCCAGGTTAGCAGGCATAGTGTGAAATGAACTTAGACATTATGTAACTTTTTGGTTTGTGCTTTGAAATTAAAATTCCTTTTCTCGAATCCCTTCAGGATCCTCTCAGAGCTAGTGATAAGGCCTTGACTAGTAGTGGCCCATACATGATGAAAGAAGAAGATGCAATGGTATACAGAAGGCCATACCTTGTCTCTGGTTCTTCTGGTTTTGCATTGAACGCAATCAGTAGAGCTATGAAAAAGGACCTTAAGGTAGCTTACTTGTCTATCACCTGGCCTTTTCAATTATTTAATTTGTATGATCTGAATGGCGTGTTTTATTACAGGTTTACATTGAATCCATGAGGAATATATTATCGAGTGATTCATGGAAAACAAAAACGACAGTATGTTGGGGCTTGAGAGATCGTTGGCTGAACTATGATGGAGTTGAAGATTTTTGTGGCAGTGCAAATTACAAAATTTTAGAACTGCCAATGGTTTGTCGTCTTTACCCCACCCCCACCCTCCTCTTGTCCTCACCAGGGGAAAAAATATTCAAAATTACCCTGTTCCATGAAAAAAGAGAGTAAAATAAAAACAAGAATATCTCACTGCTGTTTTGAGTTTCTTTCATGATTACTTGTAGCCTACGTGCCTAATTTTTTTCTCATTACTTTTCATTGCATTGATTGCCATTCTCTGGTGTCATTACTTATCATGCAGGCAGGGCACCATGTGCAGGAGGACCGTGGTGAAGAGCTAGGCAAGCTAGTCAAACGTATTCTAAGGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA005062