Os09g0342000

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Revision as of 07:22, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0342000| Description = Cyclin-like F-box domain containing protein| Version = NM_001069460.1 GI:115478662 GeneID:4346788| Length = 1496 bp|...")
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Gene Name

Os09g0342000

Description

Cyclin-like F-box domain containing protein

Version

NM_001069460.1 GI:115478662 GeneID:4346788

Length

1496 bp

Definition

Oryza sativa Japonica Group Os09g0342000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:11111587..11113082

Sequence Coding Region

11111683..11113035

Expression

GEO Profiles:Os09g0342000

Genome Context

<gbrowseImage1> name=NC_008402:11111587..11113082 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:11111587..11113082 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgcgccgcggcggccggcgcgcggacaaggctagtaactgcggcagcgcgccgaggaaggcgaaggccgtccccgccgcggcgacgtccgtggacgacgtccccgaccacctcctcgaggacatcctcctccgcctcggcccctcctccgcctgcctcgtccgcgcggcgtacgcgtgcaagcggtggcgccgcgtcgtcactgccgcgggcttcctcgacgccttccgcgcgctccacggcgcgcaccaccaccgcgtcgccgggtactaccacaccgtcgacgcctactacgcgccggcgctgcccggcggcgagagctccgtcttcgtcccgtcctcgtcatcgctcgccggcgtcgacggccgcctgtggttctcgctagattttctcccggcgagcgacgacttctcctgggagctcgccgacagccgcggcggcctactgctcctctccaagaagaggaggacacacacacgcagcggctatgcagcagaaggcgacttcttcttcactgacctcatcgtctgcgagcccctgacgcggcgctaccagggtatcctttgtccggccgacttcactggatatcgatgcatcggcgtcttcttgctcgacggcggcgatgacggcggcggtgacatcagcctgtccaacttcagggtcctctgcgcgctctacgatctctactggttaaacaatcggcacattggcgtgcaatccgcctgcgtgttctcgtcaggcagacatggcggcgggtggcggctaccgaagagcgccgtcgcggatgacatccagctcacagcaaggttcaacgccatgagcttcgtggggcgcgccggtggctgcttctactggggaatcgacgacgacgacgacgaagacgacggcgccatgctcgtcctcgacgagaccaccacggagttctcgctggtgacgttcccggacatcatccgggagaactaccacatgacgacgttccggatcatcgccggcggcgacggcgccatgcgtgttctccgcgtgataggcaacgacctcaaggtgttcacgcagctggcgggtagcggcgttgagtgggtgctggagaagctggtgcggttgccggaggcgacgcggggattgccggggcacgaggagaggtacttcgagcagaacgaagccatgatcgtcgcggcggacgcggcgtacgtgctcctgacgccgtcggtggagaagacgtggctcttctccgtcgagctggagacgatgacggtggagcgccaccatgagaggaacaagtacgcgggggtggcttacccgtacgagttgcctttgctgcgggctttgcacgcgggcggcagatatcgatga</cdnaseq>

Protein Sequence

<aaseq>MARRGGRRADKASNCGSAPRKAKAVPAAATSVDDVPDHLLEDIL LRLGPSSACLVRAAYACKRWRRVVTAAGFLDAFRALHGAHHHRVAGYYHTVDAYYAPA LPGGESSVFVPSSSSLAGVDGRLWFSLDFLPASDDFSWELADSRGGLLLLSKKRRTHT RSGYAAEGDFFFTDLIVCEPLTRRYQGILCPADFTGYRCIGVFLLDGGDDGGGDISLS NFRVLCALYDLYWLNNRHIGVQSACVFSSGRHGGGWRLPKSAVADDIQLTARFNAMSF VGRAGGCFYWGIDDDDDEDDGAMLVLDETTTEFSLVTFPDIIRENYHMTTFRIIAGGD GAMRVLRVIGNDLKVFTQLAGSGVEWVLEKLVRLPEATRGLPGHEERYFEQNEAMIVA ADAAYVLLTPSVEKTWLFSVELETMTVERHHERNKYAGVAYPYELPLLRALHAGGRYR </aaseq>

Gene Sequence

<dnaseqindica>48..1400#ttcacatcaccgttaatttcacacaccggctgattcgattctttcccatggcgcgccgcggcggccggcgcgcggacaaggctagtaactgcggcagcgcgccgaggaaggcgaaggccgtccccgccgcggcgacgtccgtggacgacgtccccgaccacctcctcgaggacatcctcctccgcctcggcccctcctccgcctgcctcgtccgcgcggcgtacgcgtgcaagcggtggcgccgcgtcgtcactgccgcgggcttcctcgacgccttccgcgcgctccacggcgcgcaccaccaccgcgtcgccgggtactaccacaccgtcgacgcctactacgcgccggcgctgcccggcggcgagagctccgtcttcgtcccgtcctcgtcatcgctcgccggcgtcgacggccgcctgtggttctcgctagattttctcccggcgagcgacgacttctcctgggagctcgccgacagccgcggcggcctactgctcctctccaagaagaggaggacacacacacgcagcggctatgcagcagaaggcgacttcttcttcactgacctcatcgtctgcgagcccctgacgcggcgctaccagggtatcctttgtccggccgacttcactggatatcgatgcatcggcgtcttcttgctcgacggcggcgatgacggcggcggtgacatcagcctgtccaacttcagggtcctctgcgcgctctacgatctctactggttaaacaatcggcacattggcgtgcaatccgcctgcgtgttctcgtcaggcagacatggcggcgggtggcggctaccgaagagcgccgtcgcggatgacatccagctcacagcaaggttcaacgccatgagcttcgtggggcgcgccggtggctgcttctactggggaatcgacgacgacgacgacgaagacgacggcgccatgctcgtcctcgacgagaccaccacggagttctcgctggtgacgttcccggacatcatccgggagaactaccacatgacgacgttccggatcatcgccggcggcgacggcgccatgcgtgttctccgcgtgataggcaacgacctcaaggtgttcacgcagctggcgggtagcggcgttgagtgggtgctggagaagctggtgcggttgccggaggcgacgcggggattgccggggcacgaggagaggtacttcgagcagaacgaagccatgatcgtcgcggcggacgcggcgtacgtgctcctgacgccgtcggtggagaagacgtggctcttctccgtcgagctggagacgatgacggtggagcgccaccatgagaggaacaagtacgcgggggtggcttacccgtacgagttgcctttgctgcgggctttgcacgcgggcggcagatatcgatgagaacaacgacttggcaacttggcgttggacgatgatatggaatgacattgtttggtttgatatcaactgttcgtgcacgatcgattcatcggctgc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0342000, RefSeq:Os09g0342000