BGIOSGA005081

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Revision as of 11:16, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA005081| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA005081, complete gene.| tag = B1455F0...")
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Gene Name

BGIOSGA005081

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA005081, complete gene.

LocusTag

B1455F06.32-1

Ensembl Transcript ID

BGIOSGA005081-TA

Ensembl Protein ID

BGIOSGA005081-PA

Length

5391

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:44193953..44199343

Sequence Coding Region

44193953..44193968,44194534..44194659,44194766..44194881,44195179..44195267,44195932..44195977
,44196321..44196789,44196898..44197025,44197255..44197958,44198078..44198618
,44198726..44199025,44199242..44199343

Genome Context

<gbrowseImage1> name=IndicaChromosome01:44193953..44199343 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:44193953..44199343 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCAGCAGCAGCAAGGATTTGATACACACAGGCTACACCAGGAAGTAAAATCGCGGTGGTTAAAGCCTAAAGAGGTTCTGCAGATATTGCAGAATCATGATCGGTTCATCATCACACATAAGACTCCTCATAAGCCACCGAGTGGTGCTTGGTTTCTTTTCAACCGTAGAGTTCTTCGGTACTTCAGAAATGATGGGTATGAATGGCGAAAAAAGAAGAATGGGAAGACTATTGCTGAAGCCCATGAGCGCCTTAAGGTTGATAATGTTGATGCACTGAATTGCTACTATGCACACGCAGACAAAAACTCTACATTTCAGAGGCGTATATATTGGATGCTTGATCCGGCTTATGATCACATAGTTTTTGTCCACTACAGAGATGTTCAAGAGGGCAGCATTTCAGTATCAGCACTGAATGATTCATCAACATCCAATCAGAATGGCAGTGGTAGCAGAGCTGAGGCTCAAAGTTCACCCGGATTGACTAGCGAGCTATTTGCCCCATGTATTAATTCATGCAGTCCAGGATCTGCGGAAGAAGTTAGTTCCCAGATTATGGCCATAAACAACGAAACAAATAGCGTTAGTCAACCTGATTGGGTTCAACATTGTAATCAGGCAGCGCTGCGAAAACTTAAGGTGCAGCTGAGTCTGGAAGATAGGGAAGATCATGATGTCGATGCCAAAGATATTCCATCAAACAGTGAACCTATCACTGTGTATGGGATTCAGAATGAAGAACCAGGCACTTGTAGAAATCTTGCAGATGTTTTTAGTGGACTGGAGTTCAGCAAAGAAAATCATCCTGAAGAAACCGGACTCCCTTTTTCCAGCACTATTGATGTGCTGAAAAATTCAGACACTTGGTTGGAGGAGGATCAGATTGAAGCAATTCTGCATTCAGCATCTATGATAGTGACTGAAAACCAATGGTTCAATATTCGTGAGGTTTCCCCAGAATGGTCCTATTGTTCTGAAAGTACAAAGGTTATCATTGCAGGAGACTTCCTTCGTGATCCCTCTCATGGTTCATGGGCAATAGTATTTGGCGATGTTAAGGTACATGCAGAAATTGTTCAGCAAGGTGTCATTCGTTGCCATACTCCATGCCTTGATGCTAGAAAAGTGACAATGTACTTGATTGATGAAAATGAGAAAGCCTGCAGTGAAGCACGACAATTCGAATTCCATAATAAGCCTACCAAAAGTGTGGTTTGTGAGAACAGGAAACCCTGCAGAGAAGTACATGAATCTGAACTCCATCAGAGGCCTACTGAAAGCAACAATGAGCTATTGTTGCTTTTTAACTATGCTCAGTTGCTTTTCGATGGTCATGTTTCTGAGCAATTTTTAAAGTTTGGCTTGCCATTCCCAAATCTTGAATGCGGACTCCAAGTTAGCCCATCTGAAATTATGAAGGGGACATCTGAGCGGCTGAACCGTGACACCGCAGTAAATTGTGTCATGGAAGTACTGCTTAACAACAAGTTTGAAGAGTGGCTGTTTTCTAAATATGAACAAAATAGTGAAGGGAATCATTTTCTCCCTAGGCAATACCATGGTGTTATACATACAATTGCTGCCTTGGGGTACAACTGGGCTTTGAAACTTCTGCTTAATTCAGGTGTACTTGTAAACTACCGTGATGCAAATGGATGGACTGCTTTACATTGGGCTGCACGATTTGGCAGGGAAGAGACGGTAGTGCTCCTTCTTGATGCAGGTGCTGCAGCTGGTGCACTGTCAGACCCAACAGCACAAGATCCTGCTGCCAAAACACCTGCTTCAGTAGCTTCTGCATATGGTTTCAAGGGCCTTTCTGCGTATCTTTCAGAAGCAGAACTAATAGCTCATCTTCATTCTCTCGAATCAAAAGAAAACGGGTCTTCTGGAGATCAAATATCAAGAGTTGTGGGCAGAATATCAGACACATCTGCCCATGCACAAAGTGGTAGCGATGATCAGCTTGCACTGAAGGAATCCCTAGGAGCTATGCGATATGCTGTTCAAGCTGCCGGGCGCATACAAACTGCCTTCCGTATTTTTTCCTTCAGGAAGAAACAACAAGCAGGTCTTCAGAATAGAGGTAACCACATTATATCCATTCGTGGGGTAGGTGCTGCTTCACACGGTATGCTTGAGAAAGCCGCGTTATCTATCCAGAAGAACTTCAGGTGCTGGAAGAAACGCAAAGAATTTCTGAAAATACGCAAAAATGTCATCAAGATACAGGCGTGTGTCAGAGCTCATCAACAACATAACAAGTACAAGGAGTTACTTCGAAGTGTGGGCATCCTTGAGAAGGTCATGCTTAGATGGTACCGAAAGGGTGTTGGTTTACGAGGATTCCATCCTGGGGCAATAGCAGTGCCAATCGATGAAGAGGACGAAGATGACATAGCCAAGGTTTTCCGGAAGCAAAGAGTGGAAACAGCTCTCAACGAAGCTGTTTCAAGGGTATCATCGATCATCGACAGTCCTGTCGCGAGACAGCAATACCGAAGGATGCTCGAAATGCACAAACAAAACAAGGATGATGATGAAAAAGTAGAAGTTTCTCCAGCATCTCATGTTTATGGCAGTGGCAGTCATCACATGTGTTGGCTAAGCCACAACAACAAAGCAATGCACTAG</cdnaseq>

Protein Sequence

<aaseq>MQQQQGFDTHRLHQEVKSRWLKPKEVLQILQNHDRFIITHKTPHKPPSGAWFLFNRRVLRYFRNDGYEWRKKKNGKTIAEAHERLKVDNVDALNCYYAHADKNSTFQRRIYWMLDPAYDHIVFVHYRDVQEGSISVSALNDSSTSNQNGSGSRAEAQSSPGLTSELFAPCINSCSPGSAEEVSSQIMAINNETNSVSQPDWVQHCNQAALRKLKVQLSLEDREDHDVDAKDIPSNSEPITVYGIQNEEPGTCRNLADVFSGLEFSKENHPEETGLPFSSTIDVLKNSDTWLEEDQIEAILHSASMIVTENQWFNIREVSPEWSYCSESTKVIIAGDFLRDPSHGSWAIVFGDVKVHAEIVQQGVIRCHTPCLDARKVTMYLIDENEKACSEARQFEFHNKPTKSVVCENRKPCREVHESELHQRPTESNNELLLLFNYAQLLFDGHVSEQFLKFGLPFPNLECGLQVSPSEIMKGTSERLNRDTAVNCVMEVLLNNKFEEWLFSKYEQNSEGNHFLPRQYHGVIHTIAALGYNWALKLLLNSGVLVNYRDANGWTALHWAARFGREETVVLLLDAGAAAGALSDPTAQDPAAKTPASVASAYGFKGLSAYLSEAELIAHLHSLESKENGSSGDQISRVVGRISDTSAHAQSGSDDQLALKESLGAMRYAVQAAGRIQTAFRIFSFRKKQQAGLQNRGNHIISIRGVGAASHGMLEKAALSIQKNFRCWKKRKEFLKIRKNVIKIQACVRAHQQHNKYKELLRSVGILEKVMLRWYRKGVGLRGFHPGAIAVPIDEEDEDDIAKVFRKQRVETALNEAVSRVSSIIDSPVARQQYRRMLEMHKQNKDDDEKVEVSPASHVYGSGSHHMCWLSHNNKAMH</aaseq>

Gene Sequence

<dnaseqindica>1..16#582..707#814..929#1227..1315#1980..2025#2369..2837#2946..3073#3303..4006#4126..4666#4774..5073#5290..5391#ATGCAGCAGCAGCAAGGTAAGGGCTGGTTCTTGGGTGCCTCGATCCATACTTGCAATCTTTCGTTGCTTATATGTGATTCTTGCAGCTAAGTTTGGTTCTGAGTAACCGGGCTGGTGGGTTATGGTTTGGGGGAAAATCAAGAAGGCGCAAGTGGTCCATATTTTCTTGGTAAATTGTTAGGACTATTAGTTTGGAATGTACTGCTGCTTTCGTAGTTCATGTTCTTACAAGTTAGTGCGATTACTGTTGAATGAACGATTTGATTCAAGGGGAGACTTGGAAAGGGGGAGGACAGGGGGTTTAAGGTCGATGAAATTCGTCAAATTGCTTGATTTCTATTGCGGGAGATGACCGTGAATTTCTTGTTAGGTACTCAGTCGCTGTAGAGTAGTTGTAGGTGCATCAATTTATTGGTGCTGCATAGGGAATCAGTTCATATTTAATGTTTGTTTTTTTTTGGGTATGGTCGATGATTCAGTGAATGCTTTATATTATGATCCTTGAGTCATTGTCATATGCTGTGAATGCCTTCGATATCTCCGAGTAGTAAAGATTGTTGCTCTTTGTTTTACCTTCTCAGGATTTGATACACACAGGCTACACCAGGAAGTAAAATCGCGGTGGTTAAAGCCTAAAGAGGTTCTGCAGATATTGCAGAATCATGATCGGTTCATCATCACACATAAGACTCCTCATAAGCCACCGAGTAATAAAGTTCTTTGGGTTTAGCTTCTGAGATACTTGTTTCAAGCTTGCACTTACTTCGTTTTAGCCCTGAATACCCCTTTACCGAGTCGATTCTGGAACTGCAGGTGGTGCTTGGTTTCTTTTCAACCGTAGAGTTCTTCGGTACTTCAGAAATGATGGGTATGAATGGCGAAAAAAGAAGAATGGGAAGACTATTGCTGAAGCCCATGAGCGCCTTAAGGTTTGCTTTGCACACTCATGTTTTGTTGAACAGTCAGTCATGTTATGATGTAGGTAAAAGATTTTTCTGAAGTAATCAAATTGGTATTTAAGCCAACAAGTAGTCAAAAGAAAAAAAATGTTTCTAATTCATAGTATGCTCAAAGTCAAAGGGATTGTCTCTGTGGCAAGACAATAGGTCAATGTCTATTATGACTGTTGCTGTTAGGACTGAACCAGATAAAGTGGATAGCAACCGGCAATCAGCATTATGGCATATAATTAATATGTTTTTCTCATTTAACACTGGAAATTTCAGGTTGATAATGTTGATGCACTGAATTGCTACTATGCACACGCAGACAAAAACTCTACATTTCAGAGGCGTATATATTGGATGCTTGATCCGTAAGAACTATTTTTACTTGCGCAAGAAAGTATTTTATACATACTATGCCATCCTTTTACAATTTTCAAAGGTTTTACATGGAATTCTGTCATGTTCCATACTTTTTGTAAAATATAGCTGTTTTTTTCTTAGAGCACAACCAATAACAAAAATTTGTTGGCCATGCGCATGTTACTCATGGAGGAACTTATATCACGCTACACATAGCGCTTTTTTTTTTTTGGGAGCAAGTCTTGTTTACAAGCTATCTATGTTGAGATCTCCATGTATCTGTGTTACTTGAATCACATTCTTGAGAGACTGCACCCTTTCCTATTGATTCTCTAAAAAAACATTTTCTTCTAGATATATTATAATTTGTACTATTCAGTATTCTGCGAGGATTGTAGACATTTTCTGATGTTGCAAAATGCTGTAAGAAATCATCTTTGCGTTCCATTCCTGGCGCTGCATTTCCTAAACTAATGAATTTGATACACTGTTGGTCTTGTTCCTTGTCCTAAACGATGAGTTCTAACAAAAATGAAAAAATATTTCTGCTGTTCGTTATGTTCTATGACATTTTTGTTTTATTAAATACTGTTGGATAATACTTAAACCAACTTACACCATAATTTTTCGCCAGGCTGAACTTACACCATAATGAGCAATTTGTCTTTGCAGGGCTTATGATCACATAGTTTTTGTCCACTACAGAGATGTTCAAGAGGTCAGCCTCCTTGTTTTGCATTCCTTTTATTAATGTGCATCTGCAATTCATGGTGGATCACCAATTACTTCGCTTTACTAGGCACAGATATGTATCCACTTCAGCTGTCAGCAATTTGACAGGCCAAAACTGGACTTGGATATATCTTTGAACATATCAGATTATTTAATCACCAGCACCAAGCACCTATGATTTGAATTTGACAGTGTGTACTCTCTCACCAATTAACTCAATTAGTCGCATACCAGGCTAGCACATGTAATGTTGTTGTTGTGATTGGAGGCACCCCAATTAAATTTTGGCATCTCATGGGCCACACCTTTATTTGTTGATTGCTTATCAGGGCAGCATTTCAGTATCAGCACTGAATGATTCATCAACATCCAATCAGAATGGCAGTGGTAGCAGAGCTGAGGCTCAAAGTTCACCCGGATTGACTAGCGAGCTATTTGCCCCATGTATTAATTCATGCAGTCCAGGATCTGCGGAAGAAGTTAGTTCCCAGATTATGGCCATAAACAACGAAACAAATAGCGTTAGTCAACCTGATTGGGTTCAACATTGTAATCAGGCAGCGCTGCGAAAACTTAAGGTGCAGCTGAGTCTGGAAGATAGGGAAGATCATGATGTCGATGCCAAAGATATTCCATCAAACAGTGAACCTATCACTGTGTATGGGATTCAGAATGAAGAACCAGGCACTTGTAGAAATCTTGCAGATGTTTTTAGTGGACTGGAGTTCAGCAAAGAAAATCATCCTGAAGAAACCGGACTCCCTTTTTCCAGCACTATTGATGTGCTGAAAAATTCAGGTGCAATAATGCTGCTCATTCCAATTCTTCCATTGACAATTACTATTTTAGATACAGTGGTCATCTATCTAAATATGTAAATTTTTGCATGAATGTCTTCTTGCTTAGACACTTGGTTGGAGGAGGATCAGATTGAAGCAATTCTGCATTCAGCATCTATGATAGTGACTGAAAACCAATGGTTCAATATTCGTGAGGTTTCCCCAGAATGGTCCTATTGTTCTGAAAGTACAAAGGTACCATATGATGGTAGACATTAACATTCTAGATTAAGCTATGCATCTTACCTTCTTCATGTGGCATTTAAGACTATATATACATTATGAGCATTCATGAAATTCGAGTTCATATATTGCCACAATGACAGAAGTCTTGTCCATTTGGTTAATCTTGTTTTGAGACAATCTGCCAGTGGTATTGCAGGCTACAGAAATTAATTGGAGATCTATAAAAAATGTAATGCAGGTTATCATTGCAGGAGACTTCCTTCGTGATCCCTCTCATGGTTCATGGGCAATAGTATTTGGCGATGTTAAGGTACATGCAGAAATTGTTCAGCAAGGTGTCATTCGTTGCCATACTCCATGCCTTGATGCTAGAAAAGTGACAATGTACTTGATTGATGAAAATGAGAAAGCCTGCAGTGAAGCACGACAATTCGAATTCCATAATAAGCCTACCAAAAGTGTGGTTTGTGAGAACAGGAAACCCTGCAGAGAAGTACATGAATCTGAACTCCATCAGAGGCCTACTGAAAGCAACAATGAGCTATTGTTGCTTTTTAACTATGCTCAGTTGCTTTTCGATGGTCATGTTTCTGAGCAATTTTTAAAGTTTGGCTTGCCATTCCCAAATCTTGAATGCGGACTCCAAGTTAGCCCATCTGAAATTATGAAGGGGACATCTGAGCGGCTGAACCGTGACACCGCAGTAAATTGTGTCATGGAAGTACTGCTTAACAACAAGTTTGAAGAGTGGCTGTTTTCTAAATATGAACAAAATAGTGAAGGGAATCATTTTCTCCCTAGGCAATACCATGGTGTTATACATACAATTGCTGCCTTGGGGTACAACTGGGCTTTGAAACTTCTGCTTAATTCAGGTGTACTTGTAAACTACCGTGATGCAAATGGATGGACTGCTTTACATTGGGCTGCACGATTTGGCAGGTATTTGAAGCTTTGTATGCTAAATGTAAACCCTAGCATAATTTGGAGAAGTTGACTACTTGTGCCAACTTCTGCTAATCTGATTTTCTCCTGTCTTGTTCATGATAAAAAACCAACAGGGAAGAGACGGTAGTGCTCCTTCTTGATGCAGGTGCTGCAGCTGGTGCACTGTCAGACCCAACAGCACAAGATCCTGCTGCCAAAACACCTGCTTCAGTAGCTTCTGCATATGGTTTCAAGGGCCTTTCTGCGTATCTTTCAGAAGCAGAACTAATAGCTCATCTTCATTCTCTCGAATCAAAAGAAAACGGGTCTTCTGGAGATCAAATATCAAGAGTTGTGGGCAGAATATCAGACACATCTGCCCATGCACAAAGTGGTAGCGATGATCAGCTTGCACTGAAGGAATCCCTAGGAGCTATGCGATATGCTGTTCAAGCTGCCGGGCGCATACAAACTGCCTTCCGTATTTTTTCCTTCAGGAAGAAACAACAAGCAGGTCTTCAGAATAGAGGTAACCACATTATATCCATTCGTGGGGTAGGTGCTGCTTCACACGGTATGCTTGAGAAAGCCGCGTTATCTATCCAGAAGAACTTCAGGTGCTGGAAGAAACGCAAAGAATTTCTGAAAATACGCAAAAATGTCATCAAGATACAGGTGAGTAACATTTGCAGAAATAGCTAGAATGTATTCTGTTGCATTATTTGTTTGAAGTCTTTTGAAGGTTTTGTACAGCTGATATAGTACTCCCTCTTTTATGATAGGCGTGTGTCAGAGCTCATCAACAACATAACAAGTACAAGGAGTTACTTCGAAGTGTGGGCATCCTTGAGAAGGTCATGCTTAGATGGTACCGAAAGGGTGTTGGTTTACGAGGATTCCATCCTGGGGCAATAGCAGTGCCAATCGATGAAGAGGACGAAGATGACATAGCCAAGGTTTTCCGGAAGCAAAGAGTGGAAACAGCTCTCAACGAAGCTGTTTCAAGGGTATCATCGATCATCGACAGTCCTGTCGCGAGACAGCAATACCGAAGGATGCTCGAAATGCACAAACAAAACAAGGTGAGATTACAAACCTTGCAAACCATTCAATATGATTCAATTAAAGTTTGAATTAACATACTTGGTTCTATAGCAAAACCTCGCTCTACAGAAAACATTTCGTGCAAGTAAAATGTACACAAAATTTCAACGTTGGCTCACTGAAATGTTCCTTATTCCAATCACAGGATGATGATGAAAAGTAGAAGACTGAAATGTTCCTTTTTCCAATCACAGGATGATGATGAAAAAGTAGAAGTTTCTCCAGCATCTCATGTTTATGGCAGTGGCAGTCATCACATGTGTTGGCTAAGCCACAACAACAAAGCAATGCACTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA005081