BGIOSGA005087

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Revision as of 11:16, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA005087| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA005087, complete gene.| tag = B1033B0...")
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Gene Name

BGIOSGA005087

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA005087, complete gene.

LocusTag

B1033B05.16

Ensembl Transcript ID

BGIOSGA005087-TA

Ensembl Protein ID

BGIOSGA005087-PA

Length

5919

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:44299657..44305575

Sequence Coding Region

44299657..44299938,44300193..44300226,44301668..44301747,44301826..44301885,44301983..44302093
,44302176..44302253,44302325..44302396,44304085..44304589,44305062..44305159
,44305236..44305266,44305397..44305575

Genome Context

<gbrowseImage1> name=IndicaChromosome01:44299657..44305575 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:44299657..44305575 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCTCCGACGCCAAGCCCGACTCCCCGCCCGCCGGCGTCGACCCCCCGCCGCCCAAGGAGGAGGCGAAGGCGGAGAAGGAGGGGGAGGGGGAGGAGCCGCAGTCGGGTGGGCGGAAGCGCGGGCGGCGGAAGAAGGGGGAGGCGGAGAAGGAGAAGGAGAAGCCCCCGCCCGCCACCCCCACCATCGAGAGGCCCTCCAGGGAGAGGAAGACCGTCGAGCGCTACTCCGAGCTCGCCCCCCGCGTCACCCCCGCCAAGAAGTCCCCCGCCATTCTCCAGGGCTCTGGATCGAAGCTGAAGGACATTCCCAACATTCAATTCAAACTATCAAAAAGAAAGGCAGACGAGAACCTGCAAAGTCTTCATGTTTTAATGTATGGAAGAAAATCAAATGTCCATTTCTTGAAGAGAAACATATCCCAATTTTCTGGTTTTGTTTGGACTGACAATCAGGAAAAACAAAGGACCAGGATAAAGGAAAAGCTTGACAAATTTAACAAGGAGAAGTTGCTGGATTTTTGTGAAATCCTTGATATACATGTTTCCAGAGCAGCCACAAAGAAGGAGGAAGTCTCTGCCAAATTACTGGAATTTTTGGAGTCCCCTTGCATCACTAGAGATGTTGTTCTCACTGATGATAAGAAAGGGAAGAAACGTGGAAGGAGATCTAAAGGAAATGGCCAGGCGACTGCTGAAGGCGCTTCTGATGGGAAGAAAAGGAGAAAGAGTCGAAAGCAATCAACTGAAGCTGCTAAAGAGAATGACGATGAAGACGATGAGGGTCCTGCTGGTTCTGAGGATGCATCAATGGGTGAGGAAGATGATGAGGATTCTGAAGCAAAAGATAATGCTGGGAGTGATGAAGAACCTGATGAGCCTCCAGCAAAGAAAAAGGCAACAGATGATAAACAAACAAAAAAGGCAAAAGAAAAGGATGCGACTGCCAAGAAGGCTTCTACAAGACCTGCAAAAGGTGTGTCTAAGCCTTCTCAAGACACTGAAGAAGATGATGAGCCAGAAGTTGAGTTAGAAAGCAAAAAGGTTGTCAAAAAAGTCTCAAAGAGTTCAAAGGAGAGTGATGTTACTGTAGATAAAACCACCAAGAAGGCTTCTAAATCCAAAAAGGATGAAGGAAAAGATGGCCAGAACAATAATTCTGGTGCATTGAACAATAAGGCACGCAAGAAGGATGCTGCCAAGACAACCAATAAAAATAAAGGAAAAGGAAAAGGCAGCACAGAGGCTGGGGCAGCCCCAACCACTGAAGAGCTGCATGCTGTTGTTAGTGACATATTGAAGGAAGTTGACTTCAATACGGCGACATTGGCAGATATTCTTCGGCAATTAGGTACTCATTTTAAGATGGACCTCATGGATAGGAAATCAGAGGTGAAACACATTATTGAGGAAGTAATAAATAGTATGTCTGATGATGAGGAAGGTGAGGAAGACAATGCTGAAGATGACAAAGACAAAAATGCTAAGGAGGAAAATTCAAAGGAAGATGCTGATGGTGACGAGAAGTAA</cdnaseq>

Protein Sequence

<aaseq>MASDAKPDSPPAGVDPPPPKEEAKAEKEGEGEEPQSGGRKRGRRKKGEAEKEKEKPPPATPTIERPSRERKTVERYSELAPRVTPAKKSPAILQGSGSKLKDIPNIQFKLSKRKADENLQSLHVLMYGRKSNVHFLKRNISQFSGFVWTDNQEKQRTRIKEKLDKFNKEKLLDFCEILDIHVSRAATKKEEVSAKLLEFLESPCITRDVVLTDDKKGKKRGRRSKGNGQATAEGASDGKKRRKSRKQSTEAAKENDDEDDEGPAGSEDASMGEEDDEDSEAKDNAGSDEEPDEPPAKKKATDDKQTKKAKEKDATAKKASTRPAKGVSKPSQDTEEDDEPEVELESKKVVKKVSKSSKESDVTVDKTTKKASKSKKDEGKDGQNNNSGALNNKARKKDAAKTTNKNKGKGKGSTEAGAAPTTEELHAVVSDILKEVDFNTATLADILRQLGTHFKMDLMDRKSEVKHIIEEVINSMSDDEEGEEDNAEDDKDKNAKEENSKEDADGDEK</aaseq>

Gene Sequence

<dnaseqindica>1..282#537..570#2012..2091#2170..2229#2327..2437#2520..2597#2669..2740#4429..4933#5406..5503#5580..5610#5741..5919#ATGGCCTCCGACGCCAAGCCCGACTCCCCGCCCGCCGGCGTCGACCCCCCGCCGCCCAAGGAGGAGGCGAAGGCGGAGAAGGAGGGGGAGGGGGAGGAGCCGCAGTCGGGTGGGCGGAAGCGCGGGCGGCGGAAGAAGGGGGAGGCGGAGAAGGAGAAGGAGAAGCCCCCGCCCGCCACCCCCACCATCGAGAGGCCCTCCAGGGAGAGGAAGACCGTCGAGCGCTACTCCGAGCTCGCCCCCCGCGTCACCCCCGCCAAGAAGTCCCCCGCCATTCTCCAGGTCACCTCGCCTTGCCCTGATCTGTTCTCTCGGGGGATGGCGTTGCCTCGGTTCTGTTGCTTTTGCCCCGTCGCAAAGCTGGAATTTATTTTCCTTTTTTTTTTCGTGTCCTAGTACTACTAGTGCTAAAAATAGCCGTTTTTAGCGATGTATGCTTACCCTTCTTCCTCCACGCTTTTGGTTCACGCTCGAGGCTTGGAACCCTTGCTGCTTAGTTTCTGACCTCTCTTTTGGTGCTTTCTTGGCTGTTGCAGGGCTCTGGATCGAAGCTGAAGGACATTCCCAACAGTAATTTCTTCCCCCTCAAACTTCTTTTTTTTTATTTTTTGAACTGAAAGCTTGTCCTGATTTGCTTTTTTTTTAAAAAATAAAAAATTAGTCACGAGACATGTACACTTGCCTAGTGGGATGGGATGCTATGCCTCTGTTTGGTTGTTAATGTGCGGAGATCTTTCTCCCGGGGATGTGCTGCTATGCTAGTATGAAAGTTCCGTTCCTTGAAACTTTAAACCGCAAAAGCTGTATCTATCTGGTATTTTTTAAGATTTAAAGCAGCAGCTGTGGGGGTTTTATTACGGATTCGCGAAAGGATCGACTATTTTTGAAATAGTGATATTGTTCTCCTGTTTTTTTTTACCTATTCATCTGCTTATATGTCCAGTTGATTTGAAATGCTTGGTGCCAGGTCAGTTAGATTTACTTTGTGCTTTGGATGCTATAAAAATAGAGGCACAAACAAGTGTGCCTAACAACTAATTAGCTGAAATCACAAGTTTCCATGGAGCATGTAGTCTTATTATTGAAGAAATTTTCAGTATAAAATGTACACTAGAAGAATAGAAGAACGGCTTAACTTGTATAGAAGTACAGGGGCCACAAGGTCATCTATAGCTCATTGACGAGTTTAAACAGTTACCTTTAGCTCAATTTGGTCTATCATTGTGTTATTTTGCCCCTGTGCAATTTAGCATATCTGGCCAGAGCCTTAAGCAAGCTAATGCTAAATCTGCTCAATTGATTCCCTTTCACATATTTGCTGGCTCTGTTTATTGAAATACATGTTCCTGGATTGGAAATATCTATCCATAGATCATATGTTTCTATATCCAACTTTTTCGACCAGTTTGTGCAGCTTAATGGAACTTAGGCTGTGTTCTAAATAACTTAAGCTGGGTTGTGAGCATGCTTTCCAAACTGCTAAATGGTGAATTTCATGCAAAAACTTTTTATATAAAAGTTTCTTAAGAGAATCAAATAAATTCAATTTTCAAATTTATGATAGCTAATACTTAATTAAATCATGTGCTAATTGCTCTTCTTGTTTTGCGCAGCCTTAATATATTTTTAGCTGTTACATTCTTGAGGTTGCTCTATTTGTTTAGTGATGCTAGAAAAGTTTGTACCATCATGGATCTTTAGATAAATGTACTATAAGCTCCAAACACAGGATAATGCAGAAACAACTAGCCCAAATCTATAAAACTGCACTCATAATTCCCACTTAGTAACTTGCTTATAGAAAATATCCCACAAACATCTTTTTAACTCAATGTGATGGGTGTATAGCACATCCTCACAACCACCAACTCCTTTTGATGGAGTAAATAATAGCTTTTGTTGCCTGTTAGAGTAGATTAATGTTTTATTTCCCATCATGTTTTTTGGGGACTAGCTGCATGCTACTCTACAATTTTTGTTTAATCATTTGTTTGCCTTGTTTTCTTATCAGTTCAATTCAAACTATCAAAAAGAAAGGCAGACGAGAACCTGCAAAGTCTTCATGTTTTAATGTATGGAAGAAAATCAAATGTAAGGTTACTGCACACCTTGTTTAGCTTTAATGTAATTTGCTCATCTTCTTTTTTAAATGTGTTCAATTCTCTGCAGGTCCATTTCTTGAAGAGAAACATATCCCAATTTTCTGGTTTTGTTTGGACTGACAATCAGGTTTGTTTTTGAGTTGATGTAATGCTATGTGAAACAATTTTATTTTTATACATGCTGAGCTTTATTTTTTGGTATGTCTGCCTGAAATCTTTCTCAGGAAAAACAAAGGACCAGGATAAAGGAAAAGCTTGACAAATTTAACAAGGAGAAGTTGCTGGATTTTTGTGAAATCCTTGATATACATGTTTCCAGAGCAGCCACAAAGAAGGTTAGTTGGCTGAGCTTCATTTCGTTTTATGGTCCATGTAATAAATCCTGTAGCAATACCCATGTGTTTTGTTGTACTTCAGGAGGAAGTCTCTGCCAAATTACTGGAATTTTTGGAGTCCCCTTGCATCACTAGAGATGTTGTTCTCACTGATGATAAGGTACATAATCTAATCAATGCTGAGTCTTCTCTTCTAGGTTGAAGTATTGCTAATTTTCATTGCCCTTGCAGAAAGGGAAGAAACGTGGAAGGAGATCTAAAGGAAATGGCCAGGCGACTGCTGAAGGCGCTTCTGATGGGAAGGTAACATCCCTTGGTGCCAAGTGGCTTGAAAATGTTGTATTATTTTCCACCTACGGGTTTACCAAGAAAAAAAAACCATATATCATGTCTCGCCTTCTGGTGTCTGCTGAAGTCTGGTGCTGTGCATCATTAAGTTGCTTAGTGTGTTAGAATAAAGTGGGTTTCTATTTATGTTTGGCTATTCATTTGTGGTTACTGTTATGAACCATCCAGAATTTGACATGTGTTGTAATTAAACCATCTGGTTATTATTCTGAAATGTTATTAGCAGAAGTACTAAAATTGGAAAAGTTTATGCCAAAGCTGAATAATCAATGAATCTCTGATACGTACAAAAAATATATGGAACTAAGGTAAAAAAGGGGCCTAAAATCCAGGGTAGACTTTATGTCTTAAGCTAGGGACTTAAGAGCCTAATCTCACATAACATACATGTGATCTTAGTCTATGGAATGTTCTTCAGTGATATTTAACACTAACAAAGTAGAGTTGCTGTTGAACTGTCACATAAAGCTGATTTTCATGGTAGACGATGAAGTCATGAAGATCATTTATCTGGGCCTGGTAGACGATGAAGTCATGAATATCATTTGCAGGATTTATGCAATTATTCTTTGCTGTGGAAAACAGTAGGTCATGGTGGGTTTGGTAAGGAATATGTAGGAGTTGGGGGAGATAATGAGAGCGGTTTGAGAACAGTAGTTTGTGTGGTGAAATGGTCAAAGTTGAGGTTTCCATCAAACCTAAGCCTCCCTTTGCTTGTGCAACATGGGTTTTGTCATTTGTGGCCAACTTGATTATGCAATTCCATGTGGCTCGTCTACATATTTGTATACAATAAAGCTTCCTGGTTTTGTGTGTGCAATTGCTCTGGTTGCATGATACATCTTCTGATGGGAATCATGAGGACAGAATTTGCTGTTTGTTTTATTCCAGTCAACTGCTGGTTCAGTCTGTTTTTTAAGCCACACTTCCAATATGCTTTGGACCATAGGCAGATAGGGAGCTGAGGTCACTATCATTTCTTTGGACCATAGGATTAAATCATCCTGTTGATTGTTTTATGAAATGTGAAACAAAATATGCATACTTGGCAGAAAAAAATAAATATTATTATTATTAGTCAAGACTAAGGAATTTCATTTTTCACTATCTTTACACAGCAATTTTTGTACTATAGCCAAACACTTATTGTGTGCTTTCATTTTGTTTTTCAGCTAGGTGTCTAATATTCTATACTCTGCTGTCTACATATATTCTCATCTTATTAAATCAAATTGATAAGCATTTATAAAATCAAATTGAGTTTCTATACTCTACTGTGTACATATACTGCAACAGAAAACAAATTGAGTTTCTACCTTATTAAATCAATTAATAAACACTCATTTAGTCCAAGTAATAATACGATTTTCCTTATTAAACAAGTAGGTGATTTTTTGAAATTTGGGGAGAGCCAATAGTGAAACGGGAGACGACTCATTGAAAGGTGGTAGGGGTAGTGTGGGAGTGGACACCACCACTACTAACATTTTAACATTATATTGACTAGATGTTAGCTTTAGTTTTAAGAGTTATTAATATATTTAGTAATATTTAATTATCAGCCAAAGCTAGCCTCTCGAAGCCATCCTCTTTATTGTAGTGGTTAATTTGTACTGACTCCTGATGTTTGTCTTTATAAACAGAAAAGGAGAAAGAGTCGAAAGCAATCAACTGAAGCTGCTAAAGAGAATGACGATGAAGACGATGAGGGTCCTGCTGGTTCTGAGGATGCATCAATGGGTGAGGAAGATGATGAGGATTCTGAAGCAAAAGATAATGCTGGGAGTGATGAAGAACCTGATGAGCCTCCAGCAAAGAAAAAGGCAACAGATGATAAACAAACAAAAAAGGCAAAAGAAAAGGATGCGACTGCCAAGAAGGCTTCTACAAGACCTGCAAAAGGTGTGTCTAAGCCTTCTCAAGACACTGAAGAAGATGATGAGCCAGAAGTTGAGTTAGAAAGCAAAAAGGTTGTCAAAAAAGTCTCAAAGAGTTCAAAGGAGAGTGATGTTACTGTAGATAAAACCACCAAGAAGGCTTCTAAATCCAAAAAGGATGAAGGAAAAGATGGCCAGAACAATAATTCTGGTGCATTGAACAATAAGGCACGCAAGAAGGATGCTGCCAAGACAACCAATAAAAATAAAGGTACAGCCGTACAAATTGTACTCAGTTGTTTTGTCCAAATAATTTCTGCTGGAGGATTTATTTTGATTTTCAAGAGTACATTTTAGATGTTTTTGAAAAAAATACCCAACTATAACTATTAGATTGTAGGGAGTTGGAATTTTACAACTTGTGCATGTGCCCCCGTTTGCTTCTCATTCATCAAATATCAGTCAAATGGTTATAAAAACTCTGAAAAAATTAACAACATTGATATGATAGGCATAGCACTGACACTGTTCATATCCAAATTTGTGTTCTGTTCTTAGACATAGATTTAATCCAGTATTGCCTGTTTGTGGCTGGACATGCCATTGTAATCTATGTAACTAATTTTTGTAGAACTTGTGAACATTTGGCTGACATGCAAGACATGAGTGTATATGCTCATTTAGTTTGTAATCGATTTTCCTATATTGTCAAGCATAGTCACACACCATCTCTTGCTCTACAGGAAAAGGAAAAGGCAGCACAGAGGCTGGGGCAGCCCCAACCACTGAAGAGCTGCATGCTGTTGTTAGTGACATATTGAAGGAAGTTGACTTCAATACGGTAAGCAAATGGTTATGATCTGCACAATTTTTTTGGCCAGCTTTGTATGCTTACTGTTGTTTATATTATCTTGTAGGCGACATTGGCAGATATTCTTCGGCAATTAGGTACTCACTTGTTTTCTTCTTTGTTAATTTCCATTGTACATTTGGGTAAAGTTGAAATATAATGTTACTTTACAGAAATTCCTTATCTATATGAATGTACTGACATAGGTTGCTATTATTTTCACTGTAGGTACTCATTTTAAGATGGACCTCATGGATAGGAAATCAGAGGTGAAACACATTATTGAGGAAGTAATAAATAGTATGTCTGATGATGAGGAAGGTGAGGAAGACAATGCTGAAGATGACAAAGACAAAAATGCTAAGGAGGAAAATTCAAAGGAAGATGCTGATGGTGACGAGAAGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA005087

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA005087&oldid=42811"