BGIOSGA005094

From RiceWiki
Revision as of 11:16, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA005094| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA005094, complete gene.| tag = P0482D0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA005094

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA005094, complete gene.

LocusTag

P0482D04.19

Ensembl Transcript ID

BGIOSGA005094-TA

Ensembl Protein ID

BGIOSGA005094-PA

Length

3361

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:44458238..44461598

Sequence Coding Region

44458238..44458333,44459727..44459985,44460794..44460830,44460980..44461085,44461216..44461326
,44461464..44461598

Genome Context

<gbrowseImage1> name=IndicaChromosome01:44458238..44461598 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:44458238..44461598 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGGCAACAGAGGAGGCGATGCCGGGGAAGGGGAGTGGCTCAAGGTCGCCGAGCTCAGGGCCACGGTGGAAGCCCAGGACCCCCATGCCAAGGAAGTGGACAACCTGACGCTGAGGAGGTTCCTGCGGGCGCGAGACCACAACGTGGAGAAGGCGTCGGCGATGCTGCTCAAGGCGCTCCGGTGGAGGAGGGAGGCGGTGCCCGGCGGCTCGGTGCCGGAGGAGAAGGTGCAAAGCGACCTCGACGACGACAAGGTCTACATGGGCGGCGCCGATCGGACCGGCCGCCCCATCCTCCTCGCCTTCCCCGCCAAGCACTTCTCCGCCAAACGCGACATGCCTAAGTTCAAGAGTTATTGTGTCTACTTACTTGACAGCATCTGTGCAAGGATCCCCAGAGGCCAGGAGAAGTTCGTCTGCATCGTGGATCTCAAGGGCTGGGGTTACTCCAACTGCGACATCAGAGCTTACATCGCGGCCATAGAGATCATGCAGAATTACTACCCGGAGAGGCTCGGCAAGGCCCTGATGATCCATGTACCCTACATGTTCATGAAGGCCTGGAAGATGATCTACCCTTTCATCGACAATGTCACCAGGGACAAGTTCGTGTTCGTGGACGACAAGAGCTTGCAAGAGGTGCTGCACCAGGAGATCGACGATAGCCAGATCCCGGATACGTTGGGCGGGAAGCTGGCACCGGTTTCCCTCAAGAACAACGCGCGAATTAACCTTGATTAG</cdnaseq>

Protein Sequence

<aaseq>MAGNRGGDAGEGEWLKVAELRATVEAQDPHAKEVDNLTLRRFLRARDHNVEKASAMLLKALRWRREAVPGGSVPEEKVQSDLDDDKVYMGGADRTGRPILLAFPAKHFSAKRDMPKFKSYCVYLLDSICARIPRGQEKFVCIVDLKGWGYSNCDIRAYIAAIEIMQNYYPERLGKALMIHVPYMFMKAWKMIYPFIDNVTRDKFVFVDDKSLQEVLHQEIDDSQIPDTLGGKLAPVSLKNNARINLD</aaseq>

Gene Sequence

<dnaseqindica>1..96#1490..1748#2557..2593#2743..2848#2979..3089#3227..3361#ATGGCGGGCAACAGAGGAGGCGATGCCGGGGAAGGGGAGTGGCTCAAGGTCGCCGAGCTCAGGGCCACGGTGGAAGCCCAGGACCCCCATGCCAAGGTACGCGACGAGATGCATCTCATCCAATTCCAACCAAAACTTACTCCATCCGCAACTGCATGAACGAATTGAATTTACTCATTCTTTCGTTCTTTCTTCCTGCTTCGTCATTCTCGGTTTTATTCTGCTTACTGTTCTTCCTGTTCTCTGTTCCAGTCAATTATTGTTTAGACGAACTCAGTGTGTTTTGATTACGCAGCAGAGCTGAATAAACCAAGCTGTTTTGACTGTCCAGCCATATAATTGTGTTGGATTGACGAAACGAACAGTCATGCTTAATTTGTGCGAAACCAAAGAGAATTTTTGCGTGCGAATCTTTGCTATGGACGAGCATTTAGTTCTCTCGAATCACACGCTTTTTTCTAGCTTCCACTCCTCAGCAACAGAAAGAATGAGTGTCGGATTAGCAAAGCCATGACGGGAAAGCAGGGCAACCAATCAGGCTGTCGCTATTTGTAGAGAAATATCGAATTAATTAGAGTATTACTACATCAGATTTGGCTGGCAGTTGATCCAACAGATCGTACCAGTAGTAATTAAGCGATGTGATGAGTAATTAGTGCCTTAGTGGATCATTGGCCAACCGTACAGATCACCGGATCGAGTCTGGAAGTACAGGGTGTATGGGGTCGCCAGCTGAATGAACCACGTGAATAAGAATGATGCTTAAGGAGTAATTTTGAAGGCTAATGGAATATGCTCCCGTGGACGCACACGCCAGCCATTACATGGAGCTGGACCTACGTTTCAGGGCAATTATATTCTCTCCATCATCGTCTGGCCAGAATAGCGGAATAGATTACAAACATTATTATAAAGATAAAAATATACTTTATTTGCCTTATAAAAACCAATTTAGTATTGGATCCTATATTAGTTTTTTATAAGACGGATGGAGTATTCAAAACATTCTTTTAAGAATATTATATACAGAAAGTTTTTTTTCCTTGAAAATTCACCACTGAAAATGCGTCGAATTCATTCATTATTTCATTTCTCAAAACAGAAAAAAGAGCATGCCAAGTAATAAACGTGCTACTAATACTATGAAAGTATGCACTCCTTCGTTCAAAAAAAAAATCAACTTGTAGTGTTTAAATTTTGTCCCACAGAAACCAAATTCTACCATCCTACGTACCATAGCAAGTAAAATGAGAAATTTTATCTCTTTAATATCATTTAGCTACATACCATTCTTACTGCCTTTTCCAATAATTAAGGGTATTTTAGTCATTCTTCATCTCCACTAAATCTACTTTGGGATGATATAAATGAATTTTCTATGGGACAGGGGAAGTAGTAACTAACAACATTGTTCGACGATCGATCGGACAGGATTTGTGAATACACGATGCTGCAGAACTGAAGCGTTCCTGATTCTTTGCGCATGCAGGAAGTGGACAACCTGACGCTGAGGAGGTTCCTGCGGGCGCGAGACCACAACGTGGAGAAGGCGTCGGCGATGCTGCTCAAGGCGCTCCGGTGGAGGAGGGAGGCGGTGCCCGGCGGCTCGGTGCCGGAGGAGAAGGTGCAAAGCGACCTCGACGACGACAAGGTCTACATGGGCGGCGCCGATCGGACCGGCCGCCCCATCCTCCTCGCCTTCCCCGCCAAGCACTTCTCCGCCAAACGCGACATGCCTAAGTTCAAGAGTACGTCTCCGTTGGATTCATATTCTCCTACCATAATGACACTACCATTACAAGCACTGACGTGTTTGGGAATAGAAGGTTGGGACCCATATACCGGTAACTGTAATGATAGTGATTGATATTATGGTAGAGAATCCTCGTCCATCTCTACTAGCTATAGAGCTTATATACTAATTCCTCATTTCTAAAATATACTACCTTTCATCTCATAATAAATTAATTTAGTATGTGACGTGATATAACCAAATACTACAGATTTAGATAACATTAAGATATGTCATATTCTATACTAAATTAACTTATTCTGAAACGAAGATAATAAGTGGGAGGTCATAAGAGTCTTGGAGGAGGCCTAATACACATTACTTAGATTAATTATTTAATTAATTAGGTGGTTATGTGTGAAAAAAGTTATTGGAGAGGGCATGCCACTGGCCACCTCCTTGTCTCCGTCATTGGAAAACATGAAAAAAAATACTTATATTTTAGAAATATAGTACTCCTTCCGTTTCGAAATGTTTGACACCGTTGACTTTTTAGCACATGTTTGACCGTTCGTCTTATTTAAAAACTTTTGTGAAATATGTAAAATTATATACCTACATAAAAATATATTTAACAATGAATCAAATAATAGGAAAAGAATTAATAATTATTTATTTTTTTTAATAAAACAAACGGTTAAACATGTTTAAAAAAGTCAACGGCGTCAAACATTTCGAAATGGAGGAAGTATTAATCTTATGTACACATAGCCTGACTTATCGAGTATGCATCCATCTTAACTATTTCGTCTTCTGCACCGCAGGTTATTGTGTCTACTTACTTGACAGCATCTGTGCAAGGTAATCACAATGGAAAATGCTCTGATCGATCGAGTTTTGTTGATTTACTGCTTGAATTAATTACTGATGAAGAACAGCTAATGCACAAGACTGACATTAAGAGTAGTTACTGAACGCTGATGATGCATATGGGTAAATTCAATTTGCAGGATCCCCAGAGGCCAGGAGAAGTTCGTCTGCATCGTGGATCTCAAGGGCTGGGGTTACTCCAACTGCGACATCAGAGCTTACATCGCGGCCATAGAGATCATGCAGGTAATATGAAAGATCATTCTTCAGTTAATTCAGCTAATTAAACATTACTGAACAATTAACAAGCATTCTTACAGATTGATGATGATTAGTTGCATATTTTTCGTTGCGTTTGATTAATTCCCCCTCGCAGAATTACTACCCGGAGAGGCTCGGCAAGGCCCTGATGATCCATGTACCCTACATGTTCATGAAGGCCTGGAAGATGATCTACCCTTTCATCGACAATGTCACCAGGGACAAGGTAATGAAATCGATCAAAGAACTTGAAATCAAGTGCCAAACAAGCTCTCGCACATTAGCACTACGTTTTAATTTCGTTCTTACAATTCTCTCCTTGATTAATTTTGGTTCAATTTGCTGTCTGAAAAAAAAATGCAGTTCGTGTTCGTGGACGACAAGAGCTTGCAAGAGGTGCTGCACCAGGAGATCGACGATAGCCAGATCCCGGATACGTTGGGCGGGAAGCTGGCACCGGTTTCCCTCAAGAACAACGCGCGAATTAACCTTGATTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA005094